FFCP PHASE2:Hg19::chr20:4982098..4982109,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9962 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10973 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10973 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9UGH3 | ||
|association_with_transcript=35bp_to_ENST00000338244,NM_005116,uc002wlg.1,uc002wlj.1,uc010zqr.1_5end | |association_with_transcript=35bp_to_ENST00000338244,NM_005116,uc002wlg.1,uc002wlj.1,uc010zqr.1_5end | ||
|cluster_id=chr20:4982098..4982109,- | |cluster_id=chr20:4982098..4982109,- |
Latest revision as of 22:53, 16 September 2015
Short description: | p2@SLC23A2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC23A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000338244, NM_005116, uc002wlg.1, uc002wlj.1, uc010zqr.1_5end |
EntrezGene: | SLC23A2 |
HGNC: | 10973 |
UniProt: | Q9UGH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@SLC23A2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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leukocyte | 2.73e-28 | 136 |
myeloid leukocyte | 2.89e-27 | 72 |
defensive cell | 5.36e-23 | 48 |
phagocyte | 5.36e-23 | 48 |
hematopoietic lineage restricted progenitor cell | 2.92e-22 | 120 |
granulocyte monocyte progenitor cell | 1.21e-21 | 67 |
nongranular leukocyte | 1.22e-21 | 115 |
myeloid lineage restricted progenitor cell | 2.90e-21 | 66 |
hematopoietic stem cell | 4.50e-20 | 168 |
monopoietic cell | 8.53e-20 | 59 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
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neural tube | 5.49e-22 | 56 |
neural rod | 5.49e-22 | 56 |
future spinal cord | 5.49e-22 | 56 |
neural keel | 5.49e-22 | 56 |
regional part of nervous system | 2.95e-21 | 53 |
regional part of brain | 2.95e-21 | 53 |
regional part of forebrain | 3.25e-18 | 41 |
forebrain | 3.25e-18 | 41 |
anterior neural tube | 3.25e-18 | 41 |
future forebrain | 3.25e-18 | 41 |
Showing 1 to 10 of 37 entries