FFCP PHASE1:Hg19::chr20:54987494..54987512,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=57091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=15878 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 03:10, 17 September 2015
Short description: | p2@CASS4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CASS4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 130bp_to_ENST00000497244_5end |
EntrezGene: | CASS4 |
HGNC: | 15878 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@CASS4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.26e-43 | 108 |
common myeloid progenitor | 1.26e-43 | 108 |
myeloid leukocyte | 3.80e-32 | 72 |
classical monocyte | 1.92e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.92e-30 | 42 |
defensive cell | 1.09e-28 | 48 |
phagocyte | 1.09e-28 | 48 |
hematopoietic oligopotent progenitor cell | 1.14e-27 | 161 |
hematopoietic multipotent progenitor cell | 1.14e-27 | 161 |
hematopoietic stem cell | 1.42e-26 | 168 |
Showing 1 to 10 of 29 entries
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.88e-29 | 98 |
blood island | 8.88e-29 | 98 |
hemolymphoid system | 8.26e-26 | 108 |
bone marrow | 5.96e-20 | 76 |
bone element | 6.96e-19 | 82 |
immune system | 3.26e-18 | 93 |
skeletal element | 3.70e-16 | 90 |
skeletal system | 2.86e-14 | 100 |
lateral plate mesoderm | 2.89e-10 | 203 |
blood | 1.02e-09 | 15 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 9.48e-10 | 31 |
musculoskeletal system disease | 4.30e-08 | 5 |
myotonic disease | 4.30e-08 | 5 |
muscle tissue disease | 4.30e-08 | 5 |
myopathy | 4.30e-08 | 5 |
muscular disease | 4.30e-08 | 5 |
myotonic dystrophy | 4.30e-08 | 5 |
chronic leukemia | 9.63e-08 | 8 |
leukemia | 7.29e-07 | 39 |
Showing 1 to 9 of 9 entries