FFCP PHASE2:Hg19::chr9:35829208..35829308,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:51754 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:21427 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=51754 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=21427 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A6NDV4 | ||
|association_with_transcript=0bp_to_ENST00000377991,ENST00000439587,ENST00000464519,NM_001042589,NM_016446,uc003zyk.2,uc003zyl.2,uc003zym.2_5end | |association_with_transcript=0bp_to_ENST00000377991,ENST00000439587,ENST00000464519,NM_001042589,NM_016446,uc003zyk.2,uc003zyl.2,uc003zym.2_5end | ||
|cluster_id=chr9:35829208..35829308,+ | |cluster_id=chr9:35829208..35829308,+ | ||
Latest revision as of 09:04, 17 September 2015
| Short description: | p1@TMEM8B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_TMEM8B_5end |
| Coexpression cluster: | C271_pineal_spinal_locus_globus_medulla_thalamus_cerebellum |
| Association with transcript: | 0bp_to_ENST00000377991, ENST00000439587, ENST00000464519, NM_001042589, NM_016446, uc003zyk.2, uc003zyl.2, uc003zym.2_5end |
| EntrezGene: | TMEM8B |
| HGNC: | 21427 |
| UniProt: | A6NDV4 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@TMEM8B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 2.80e-35 | 114 |
| neural tube | 1.02e-32 | 56 |
| neural rod | 1.02e-32 | 56 |
| future spinal cord | 1.02e-32 | 56 |
| neural keel | 1.02e-32 | 56 |
| ectoderm-derived structure | 3.27e-32 | 171 |
| ectoderm | 3.27e-32 | 171 |
| presumptive ectoderm | 3.27e-32 | 171 |
| neural plate | 5.69e-32 | 82 |
| presumptive neural plate | 5.69e-32 | 82 |
Showing 1 to 10 of 51 entries
