FFCP PHASE2:Mm9::chr12:4038774..4038855,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:668212 |HGNC= |MCL_coexpression_id=240 |TSSclassifier=NA |UniProt=uniprot:Q6ZQ18 |association_with_transcript=59bp_...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=668212 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=240 | |MCL_coexpression_id=240 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q6ZQ18 | ||
|association_with_transcript=59bp_to_ENSMUST00000077156,ENSMUST00000111178,NM_001082483,uc007mxh.1_5end | |association_with_transcript=59bp_to_ENSMUST00000077156,ENSMUST00000111178,NM_001082483,uc007mxh.1_5end | ||
|cluster_id=chr12:4038774..4038855,- | |cluster_id=chr12:4038774..4038855,- | ||
Latest revision as of 14:41, 26 September 2015
| Short description: | p1@Efr3b |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Efr3b_5end |
| Coexpression cluster: | MCL_coexpression_mm9:240 |
| Association with transcript: | 59bp_to_ENSMUST00000077156, ENSMUST00000111178, NM_001082483, uc007mxh.1_5end |
| EntrezGene: | Efr3b |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Efr3b |
|---|
0
10
20
30
40
50
60
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 8.93e-12 | 23 |
| neuroblast (sensu Vertebrata) | 8.93e-12 | 23 |
| neuron | 5.79e-08 | 33 |
| neuronal stem cell | 5.79e-08 | 33 |
| neuroblast | 5.79e-08 | 33 |
| electrically signaling cell | 5.79e-08 | 33 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 2.42e-19 | 54 |
| neurectoderm | 5.41e-19 | 64 |
| neural plate | 5.41e-19 | 64 |
| presumptive neural plate | 5.41e-19 | 64 |
| structure with developmental contribution from neural crest | 4.88e-18 | 92 |
| neural tube | 7.14e-18 | 52 |
| neural rod | 7.14e-18 | 52 |
| future spinal cord | 7.14e-18 | 52 |
| neural keel | 7.14e-18 | 52 |
| central nervous system | 9.39e-18 | 73 |
Showing 1 to 10 of 34 entries
