FFCP PHASE2:Mm9::chr11:117830598..117830611,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:12702 |HGNC= |MCL_coexpression_id=280 |TSSclassifier=NA |UniProt=uniprot:B1AQL6,uniprot:O35718 |association_with_tr...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=12702 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=280 | |MCL_coexpression_id=280 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=B1AQL6,O35718 | ||
|association_with_transcript=68bp_to_NM_007707,uc007moi.2_5end | |association_with_transcript=68bp_to_NM_007707,uc007moi.2_5end | ||
|cluster_id=chr11:117830598..117830611,- | |cluster_id=chr11:117830598..117830611,- | ||
Latest revision as of 01:22, 27 September 2015
| Short description: | p5@Socs3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Socs3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:280 |
| Association with transcript: | 68bp_to_NM_007707, uc007moi.2_5end |
| EntrezGene: | Socs3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p5@Socs3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mature alpha-beta T cell | 1.11e-17 | 9 |
| alpha-beta T cell | 1.11e-17 | 9 |
| immature T cell | 1.11e-17 | 9 |
| mature T cell | 1.11e-17 | 9 |
| immature alpha-beta T cell | 1.11e-17 | 9 |
| T cell | 1.80e-14 | 11 |
| pro-T cell | 1.80e-14 | 11 |
| lymphoid lineage restricted progenitor cell | 2.90e-13 | 12 |
| CD4-positive, alpha-beta T cell | 6.99e-13 | 8 |
| lymphocyte | 3.06e-12 | 13 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 5.55e-08 | 46 |
| bile duct | 1.78e-07 | 1 |
| hepatic sinusoid | 1.78e-07 | 1 |
| parenchyma | 1.78e-07 | 1 |
| abdomen blood vessel | 1.78e-07 | 1 |
| sinusoid | 1.78e-07 | 1 |
| digestive system duct | 1.78e-07 | 1 |
| abdominal segment blood vessel | 1.78e-07 | 1 |
| trunk blood vessel | 1.78e-07 | 1 |
| liver parenchyma | 1.78e-07 | 1 |
Showing 1 to 10 of 15 entries
