FFCP PHASE1:Hg19::chr12:66218003..66218018,+
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| Short description: | p9@HMGA2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_HMGA2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 92bp_to_ENST00000403681_5end |
| EntrezGene: | HMGA2 |
| HGNC: | 5009 |
| UniProt: | P52926 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p9@HMGA2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 2.62e-27 | 253 |
| endodermal cell | 2.61e-15 | 58 |
| endo-epithelial cell | 9.98e-14 | 42 |
| embryonic cell | 9.15e-13 | 250 |
| epithelial cell of nephron | 5.35e-09 | 15 |
| kidney cell | 6.90e-09 | 17 |
| kidney epithelial cell | 6.90e-09 | 17 |
| kidney tubule cell | 1.87e-08 | 10 |
| nephron tubule epithelial cell | 1.87e-08 | 10 |
Showing 1 to 9 of 9 entries
| Ontology term | p-value | n |
|---|---|---|
| trunk region element | 1.09e-09 | 101 |
| nephron epithelium | 5.35e-09 | 15 |
| renal tubule | 5.35e-09 | 15 |
| nephron tubule | 5.35e-09 | 15 |
| nephron | 5.35e-09 | 15 |
| uriniferous tubule | 5.35e-09 | 15 |
| nephrogenic mesenchyme | 5.35e-09 | 15 |
| nephron tubule epithelium | 1.87e-08 | 10 |
| excretory tube | 3.85e-08 | 16 |
| kidney epithelium | 3.85e-08 | 16 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| cell type cancer | 2.76e-09 | 143 |
| carcinoma | 2.75e-07 | 106 |
Showing 1 to 2 of 2 entries
