FFCP PHASE1:Hg19::chr19:18433875..18433909,-
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| Short description: | p1@LSM4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LSM4_5end |
| Coexpression cluster: | C3766_Alveolar_Renal_chronic_Placental_nonsmall_acute_carcinoid |
| Association with transcript: | 91bp_to_ENST00000252816, NM_001252129, NM_012321, uc002niq.2_5end |
| EntrezGene: | LSM4 |
| HGNC: | 17259 |
| UniProt: | Q9Y4Z0 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@LSM4 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 6.89e-26 | 253 |
| embryonic cell | 4.22e-21 | 250 |
| ectodermal cell | 1.00e-09 | 72 |
| epithelial cell of nephron | 1.28e-07 | 15 |
| mesodermal cell | 1.43e-07 | 121 |
| migratory neural crest cell | 1.79e-07 | 41 |
| neurectodermal cell | 2.09e-07 | 59 |
| electrically responsive cell | 5.99e-07 | 61 |
| electrically active cell | 5.99e-07 | 61 |
| kidney cell | 6.35e-07 | 17 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelial vesicle | 2.96e-08 | 78 |
| cell layer | 3.96e-08 | 309 |
| trunk | 4.42e-08 | 199 |
| epithelium | 9.57e-08 | 306 |
| segment of respiratory tract | 9.72e-08 | 47 |
| nephron epithelium | 1.28e-07 | 15 |
| renal tubule | 1.28e-07 | 15 |
| nephron tubule | 1.28e-07 | 15 |
| nephron | 1.28e-07 | 15 |
| uriniferous tubule | 1.28e-07 | 15 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| disease of cellular proliferation | 4.12e-17 | 239 |
| cancer | 1.15e-16 | 235 |
| cell type cancer | 2.41e-10 | 143 |
| carcinoma | 1.13e-08 | 106 |
| organ system cancer | 5.82e-08 | 137 |
Showing 1 to 5 of 5 entries
