FFCP PHASE2:Hg19::chr19:41257196..41257214,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p5@SNRPA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_SNRPA_5end |
| Coexpression cluster: | C3793_iPS_testicular_Alveolar_Burkitt_transitionalcell_neuroblastoma_small |
| Association with transcript: | 70bp_to_ENST00000545469_5end |
| EntrezGene: | SNRPA |
| HGNC: | 11151 |
| UniProt: | B4DDC7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@SNRPA |
|---|
0
10
20
30
40
50
60
70
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 6.76e-33 | 253 |
| embryonic cell | 8.36e-15 | 250 |
| epithelial cell of nephron | 5.27e-09 | 15 |
| kidney cell | 6.47e-08 | 17 |
| kidney epithelial cell | 6.47e-08 | 17 |
| ectodermal cell | 1.06e-07 | 72 |
| meso-epithelial cell | 1.27e-07 | 45 |
| squamous epithelial cell | 1.64e-07 | 63 |
| kidney cortical cell | 2.92e-07 | 12 |
| renal cortical epithelial cell | 2.92e-07 | 12 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| nephron epithelium | 5.27e-09 | 15 |
| renal tubule | 5.27e-09 | 15 |
| nephron tubule | 5.27e-09 | 15 |
| nephron | 5.27e-09 | 15 |
| uriniferous tubule | 5.27e-09 | 15 |
| nephrogenic mesenchyme | 5.27e-09 | 15 |
| excretory tube | 2.74e-08 | 16 |
| kidney epithelium | 2.74e-08 | 16 |
| cortex | 1.02e-07 | 15 |
| cortex of kidney | 2.92e-07 | 12 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 7.41e-28 | 235 |
| disease of cellular proliferation | 1.57e-26 | 239 |
| cell type cancer | 2.12e-17 | 143 |
| carcinoma | 2.85e-14 | 106 |
| organ system cancer | 1.08e-11 | 137 |
| germ cell and embryonal cancer | 9.01e-09 | 22 |
| germ cell cancer | 9.01e-09 | 22 |
| hematologic cancer | 8.35e-07 | 51 |
| immune system cancer | 8.35e-07 | 51 |
Showing 1 to 9 of 9 entries
