FFCP PHASE2:Hg19::chr6:152506537..152506551,-
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| Short description: | p13@SYNE1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_13_at_SYNE1_5end |
| Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
| Association with transcript: | 0bp_to_ENST00000536990_5end |
| EntrezGene: | SYNE1 |
| HGNC: | 17089 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p13@SYNE1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lymphoid lineage restricted progenitor cell | 5.21e-55 | 52 |
| lymphocyte | 8.53e-54 | 53 |
| common lymphoid progenitor | 8.53e-54 | 53 |
| mature alpha-beta T cell | 6.94e-52 | 18 |
| alpha-beta T cell | 6.94e-52 | 18 |
| immature T cell | 6.94e-52 | 18 |
| mature T cell | 6.94e-52 | 18 |
| immature alpha-beta T cell | 6.94e-52 | 18 |
| T cell | 8.24e-40 | 25 |
| pro-T cell | 8.24e-40 | 25 |
Showing 1 to 10 of 39 entries
| Ontology term | p-value | n |
|---|---|---|
| blood | 6.22e-17 | 15 |
| haemolymphatic fluid | 6.22e-17 | 15 |
| organism substance | 6.22e-17 | 15 |
| thymus | 5.57e-07 | 4 |
| hemolymphoid system gland | 5.57e-07 | 4 |
| thymic region | 5.57e-07 | 4 |
| pharyngeal gland | 5.57e-07 | 4 |
| thymus primordium | 5.57e-07 | 4 |
Showing 1 to 8 of 8 entries
