FF:10819-111B9: Difference between revisions
From FANTOM5_SSTAR
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|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|datafreeze_phase=1 | |||
|def= | |def= | ||
|expression_enrichment_score=chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.56!364.44!PEG3;;chr6:1312325..1312340,+!p1@FOXQ1!2.38!379.69!FOXQ1;;chr1:27240455..27240474,-!p1@NR0B2!2.08!118.68!NR0B2;;chr2:171571827..171571853,+!p1@SP5!2.02!104.67!SP5;;chrX:131624056..131624069,-!p2@MBNL3!1.97!124.86!MBNL3;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.92!82.42!SEBOX;;chr17:53342311..53342400,+!p1@HLF!1.88!85.79!HLF;;chr20:43029862..43029900,+!p1@HNF4A!1.88!74.83!HNF4A;;chr1:214161272..214161322,+!p1@PROX1!1.84!93.71!PROX1;;chr17:53344945..53344977,+!p2@HLF!1.84!68.41!HLF;;chr7:73038839..73038862,-!p1@MLXIPL!1.82!64.53!MLXIPL;;chr17:41622765..41622821,-!p2@ETV4!1.80!92.88!ETV4;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.79!60.08!SEBOX;;chr12:100867627..100867652,+!p1@NR1H4!1.75!54.81!NR1H4;;chr14:38064429..38064486,-!p1@FOXA1!1.74!54.06!FOXA1;;chr17:41622731..41622764,-!p5@ETV4!1.69!47.55!ETV4;;chr17:53344980..53345011,+!p3@HLF!1.58!37.33!HLF;;chrX:131547625..131547644,-!p4@MBNL3!1.57!36.18!MBNL3;;chr20:42984330..42984364,+!p2@HNF4A!1.55!34.28!HNF4A;;chr20:22564895..22564910,-!p1@FOXA2!1.54!33.87!FOXA2;;chr19:33793430..33793447,-!p1@CEBPA!1.49!120.57!CEBPA;;chr2:171571796..171571808,+!p4@SP5!1.46!28.02!SP5;;chr17:70117153..70117174,+!p1@SOX9!1.45!270.65!SOX9;;chr12:66218183..66218209,+!p4@HMGA2!1.45!50.77!HMGA2;;chr2:171572786..171572840,+!p2@SP5!1.45!27.20!SP5;;chr8:11561684..11561751,+!p1@GATA4!1.42!25.38!GATA4;;chr19:2867325..2867348,+!p1@ZNF556!1.40!24.40!ZNF556;;chr10:94449703..94449718,+!p1@HHEX!1.37!85.30!HHEX;;chr1:226411361..226411366,+!p1@MIXL1!1.36!22.17!MIXL1;;chr12:100867653..100867677,+!p2@NR1H4!1.36!21.76!NR1H4;;chr12:66218212..66218244,+!p5@HMGA2!1.34!30.16!HMGA2;;chr20:62680984..62680999,-!p1@SOX18!1.32!26.37!SOX18;;chr2:177053386..177053402,+!p1@HOXD1!1.30!18.87!HOXD1;;chr17:41623692..41623715,-!p1@ETV4!1.29!77.72!ETV4;;chr12:66218255..66218304,+!p3@HMGA2!1.29!48.63!HMGA2;;chr15:53082521..53082549,-!p1@ONECUT1!1.29!18.30!ONECUT1;;chr11:61520075..61520136,+!p1@C11orf9!1.28!38.16!C11orf9;;chr12:24102576..24102623,-!p2@SOX5!1.27!17.47!SOX5;;chrX:131547596..131547609,-!p10@MBNL3!1.27!17.47!MBNL3;;chr12:66218003..66218018,+!p9@HMGA2!1.26!20.69!HMGA2;;chr2:171571931..171571959,+!p3@SP5!1.24!16.57!SP5;;chr9:127269661..127269719,-!p1@NR5A1!1.24!16.32!NR5A1;;chr5:134369905..134369972,-!p1@PITX1!1.22!23.90!PITX1;;chr2:25475120..25475176,-!p2@DNMT3A!1.22!20.77!DNMT3A;;chr16:52581025..52581072,-!p1@TOX3!1.22!15.58!TOX3;;chr8:76319876..76319926,+!p1@HNF4G!1.21!15.33!HNF4G;;chr19:46367576..46367592,+!p1@FOXA3!1.20!14.92!FOXA3;;chr10:51572408..51572454,+!p3@NCOA4!1.19!83.65!NCOA4;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!1.18!14.09!SEBOX;;chr17:41622925..41622976,-!p3@ETV4!1.17!20.52!ETV4;;chr12:66218598..66218645,+!p2@HMGA2!1.16!61.56!HMGA2;;chr2:63277948..63277974,+!p1@OTX1!1.13!12.53!OTX1;;chrY:21906594..21906622,-!p1@KDM5D!1.12!12.28!KDM5D;;chr20:43030002..43030028,+!p3@HNF4A!1.11!11.95!HNF4A;;chr1:214161328..214161348,+!p2@PROX1!1.10!11.62!PROX1;;chr12:66218836..66218888,+!p1@HMGA2!1.08!104.42!HMGA2;;chr12:66218152..66218174,+!p10@HMGA2!1.08!11.79!HMGA2;;chr2:113977697..113977733,-!p6@PAX8!1.07!10.71!PAX8;;chr19:926001..926046,+!p1@ARID3A!1.03!34.61!ARID3A;;chr2:25475094..25475112,-!p3@DNMT3A!1.03!9.73!DNMT3A;;chr20:50159198..50159299,-!p1@NFATC2!1.02!14.09!NFATC2;;chr3:141150883..141150961,+!p6@ZBTB38!1.02!9.48!ZBTB38;;chr14:38064590..38064606,-!p2@FOXA1!1.01!9.15!FOXA1;;chr17:41623667..41623682,-!p8@ETV4!1.00!9.64!ETV4;;chr12:66357214..66357233,+!p13@HMGA2!1.00!8.90!HMGA2;;chr5:134369879..134369898,-!p2@PITX1!0.98!8.65!PITX1;;chr8:37963466..37963506,+!p3@ASH2L!0.96!10.22!ASH2L;;chr2:239148671..239148686,-!p1@HES6!0.95!29.83!HES6;;chr16:68118689..68118733,+!p3@NFATC3!0.95!20.52!NFATC3;;chr6:7108179..7108199,+!p4@RREB1!0.95!16.32!RREB1;;chr12:66218378..66218401,+!p6@HMGA2!0.95!12.36!HMGA2;;chrX:128657457..128657475,-!p1@SMARCA1!0.94!91.32!SMARCA1;;chr19:48773337..48773339,+!p2@ZNF114!0.94!7.66!ZNF114;;chr19:926055..926068,+!p2@ARID3A!0.93!16.81!ARID3A;;chr3:141151009..141151033,+!p10@ZBTB38!0.93!7.58!ZBTB38;;chr2:46524897..46524911,+!p2@EPAS1!0.92!21.26!EPAS1;;chr10:94449675..94449694,+!p2@HHEX!0.92!20.44!HHEX;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.92!10.80!TGIF2;;chr20:42295713..42295738,+!p2@MYBL2!0.91!44.17!MYBL2;;chr16:54320101..54320125,-!p4@IRX3!0.91!10.38!IRX3;;chr12:100867736..100867750,+!p4@NR1H4!0.91!7.17!NR1H4;;chr12:121416340..121416360,+!p1@HNF1A!0.91!7.17!HNF1A;;chr12:24103844..24103880,-!p3@SOX5!0.91!7.17!SOX5;;chr12:121416455..121416479,+!p2@HNF1A!0.91!7.09!HNF1A;;chr12:7079780..7079791,-!p2@PHB2!0.90!37.91!PHB2;;chr17:41622834..41622883,-!p6@ETV4!0.90!8.41!ETV4;;chr12:66218573..66218596,+!p7@HMGA2!0.89!10.30!HMGA2;;chr1:201979743..201979762,+!p1@ELF3!0.89!6.84!ELF3;;chr7:73038867..73038878,-!p2@MLXIPL!0.89!6.68!MLXIPL;;chr2:171572699..171572713,+!p7@SP5!0.89!6.68!SP5;;chrX:131623982..131624011,-!p6@MBNL3!0.88!9.89!MBNL3;;chr20:306177..306211,+!p2@SOX12!0.86!45.58!SOX12;;ch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| |expression_enrichment_score=chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!2.56!364.44!PEG3;;chr6:1312325..1312340,+!p1@FOXQ1!2.38!379.69!FOXQ1;;chr1:27240455..27240474,-!p1@NR0B2!2.08!118.68!NR0B2;;chr2:171571827..171571853,+!p1@SP5!2.02!104.67!SP5;;chrX:131624056..131624069,-!p2@MBNL3!1.97!124.86!MBNL3;;chr17:26697304..26697335,-!p1@SEBOX,p1@VTN!1.92!82.42!SEBOX;;chr17:53342311..53342400,+!p1@HLF!1.88!85.79!HLF;;chr20:43029862..43029900,+!p1@HNF4A!1.88!74.83!HNF4A;;chr1:214161272..214161322,+!p1@PROX1!1.84!93.71!PROX1;;chr17:53344945..53344977,+!p2@HLF!1.84!68.41!HLF;;chr7:73038839..73038862,-!p1@MLXIPL!1.82!64.53!MLXIPL;;chr17:41622765..41622821,-!p2@ETV4!1.80!92.88!ETV4;;chr17:26697276..26697303,-!p2@SEBOX,p2@VTN!1.79!60.08!SEBOX;;chr12:100867627..100867652,+!p1@NR1H4!1.75!54.81!NR1H4;;chr14:38064429..38064486,-!p1@FOXA1!1.74!54.06!FOXA1;;chr17:41622731..41622764,-!p5@ETV4!1.69!47.55!ETV4;;chr17:53344980..53345011,+!p3@HLF!1.58!37.33!HLF;;chrX:131547625..131547644,-!p4@MBNL3!1.57!36.18!MBNL3;;chr20:42984330..42984364,+!p2@HNF4A!1.55!34.28!HNF4A;;chr20:22564895..22564910,-!p1@FOXA2!1.54!33.87!FOXA2;;chr19:33793430..33793447,-!p1@CEBPA!1.49!120.57!CEBPA;;chr2:171571796..171571808,+!p4@SP5!1.46!28.02!SP5;;chr17:70117153..70117174,+!p1@SOX9!1.45!270.65!SOX9;;chr12:66218183..66218209,+!p4@HMGA2!1.45!50.77!HMGA2;;chr2:171572786..171572840,+!p2@SP5!1.45!27.20!SP5;;chr8:11561684..11561751,+!p1@GATA4!1.42!25.38!GATA4;;chr19:2867325..2867348,+!p1@ZNF556!1.40!24.40!ZNF556;;chr10:94449703..94449718,+!p1@HHEX!1.37!85.30!HHEX;;chr1:226411361..226411366,+!p1@MIXL1!1.36!22.17!MIXL1;;chr12:100867653..100867677,+!p2@NR1H4!1.36!21.76!NR1H4;;chr12:66218212..66218244,+!p5@HMGA2!1.34!30.16!HMGA2;;chr20:62680984..62680999,-!p1@SOX18!1.32!26.37!SOX18;;chr2:177053386..177053402,+!p1@HOXD1!1.30!18.87!HOXD1;;chr17:41623692..41623715,-!p1@ETV4!1.29!77.72!ETV4;;chr12:66218255..66218304,+!p3@HMGA2!1.29!48.63!HMGA2;;chr15:53082521..53082549,-!p1@ONECUT1!1.29!18.30!ONECUT1;;chr11:61520075..61520136,+!p1@C11orf9!1.28!38.16!C11orf9;;chr12:24102576..24102623,-!p2@SOX5!1.27!17.47!SOX5;;chrX:131547596..131547609,-!p10@MBNL3!1.27!17.47!MBNL3;;chr12:66218003..66218018,+!p9@HMGA2!1.26!20.69!HMGA2;;chr2:171571931..171571959,+!p3@SP5!1.24!16.57!SP5;;chr9:127269661..127269719,-!p1@NR5A1!1.24!16.32!NR5A1;;chr5:134369905..134369972,-!p1@PITX1!1.22!23.90!PITX1;;chr2:25475120..25475176,-!p2@DNMT3A!1.22!20.77!DNMT3A;;chr16:52581025..52581072,-!p1@TOX3!1.22!15.58!TOX3;;chr8:76319876..76319926,+!p1@HNF4G!1.21!15.33!HNF4G;;chr19:46367576..46367592,+!p1@FOXA3!1.20!14.92!FOXA3;;chr10:51572408..51572454,+!p3@NCOA4!1.19!83.65!NCOA4;;chr17:26697257..26697268,-!p3@SEBOX,p3@VTN!1.18!14.09!SEBOX;;chr17:41622925..41622976,-!p3@ETV4!1.17!20.52!ETV4;;chr12:66218598..66218645,+!p2@HMGA2!1.16!61.56!HMGA2;;chr2:63277948..63277974,+!p1@OTX1!1.13!12.53!OTX1;;chrY:21906594..21906622,-!p1@KDM5D!1.12!12.28!KDM5D;;chr20:43030002..43030028,+!p3@HNF4A!1.11!11.95!HNF4A;;chr1:214161328..214161348,+!p2@PROX1!1.10!11.62!PROX1;;chr12:66218836..66218888,+!p1@HMGA2!1.08!104.42!HMGA2;;chr12:66218152..66218174,+!p10@HMGA2!1.08!11.79!HMGA2;;chr2:113977697..113977733,-!p6@PAX8!1.07!10.71!PAX8;;chr19:926001..926046,+!p1@ARID3A!1.03!34.61!ARID3A;;chr2:25475094..25475112,-!p3@DNMT3A!1.03!9.73!DNMT3A;;chr20:50159198..50159299,-!p1@NFATC2!1.02!14.09!NFATC2;;chr3:141150883..141150961,+!p6@ZBTB38!1.02!9.48!ZBTB38;;chr14:38064590..38064606,-!p2@FOXA1!1.01!9.15!FOXA1;;chr17:41623667..41623682,-!p8@ETV4!1.00!9.64!ETV4;;chr12:66357214..66357233,+!p13@HMGA2!1.00!8.90!HMGA2;;chr5:134369879..134369898,-!p2@PITX1!0.98!8.65!PITX1;;chr8:37963466..37963506,+!p3@ASH2L!0.96!10.22!ASH2L;;chr2:239148671..239148686,-!p1@HES6!0.95!29.83!HES6;;chr16:68118689..68118733,+!p3@NFATC3!0.95!20.52!NFATC3;;chr6:7108179..7108199,+!p4@RREB1!0.95!16.32!RREB1;;chr12:66218378..66218401,+!p6@HMGA2!0.95!12.36!HMGA2;;chrX:128657457..128657475,-!p1@SMARCA1!0.94!91.32!SMARCA1;;chr19:48773337..48773339,+!p2@ZNF114!0.94!7.66!ZNF114;;chr19:926055..926068,+!p2@ARID3A!0.93!16.81!ARID3A;;chr3:141151009..141151033,+!p10@ZBTB38!0.93!7.58!ZBTB38;;chr2:46524897..46524911,+!p2@EPAS1!0.92!21.26!EPAS1;;chr10:94449675..94449694,+!p2@HHEX!0.92!20.44!HHEX;;chr20:35202909..35202963,+!p2@TGIF2,p3@C20orf24!0.92!10.80!TGIF2;;chr20:42295713..42295738,+!p2@MYBL2!0.91!44.17!MYBL2;;chr16:54320101..54320125,-!p4@IRX3!0.91!10.38!IRX3;;chr12:100867736..100867750,+!p4@NR1H4!0.91!7.17!NR1H4;;chr12:121416340..121416360,+!p1@HNF1A!0.91!7.17!HNF1A;;chr12:24103844..24103880,-!p3@SOX5!0.91!7.17!SOX5;;chr12:121416455..121416479,+!p2@HNF1A!0.91!7.09!HNF1A;;chr12:7079780..7079791,-!p2@PHB2!0.90!37.91!PHB2;;chr17:41622834..41622883,-!p6@ETV4!0.90!8.41!ETV4;;chr12:66218573..66218596,+!p7@HMGA2!0.89!10.30!HMGA2;;chr1:201979743..201979762,+!p1@ELF3!0.89!6.84!ELF3;;chr7:73038867..73038878,-!p2@MLXIPL!0.89!6.68!MLXIPL;;chr2:171572699..171572713,+!p7@SP5!0.89!6.68!SP5;;chrX:131623982..131624011,-!p6@MBNL3!0.88!9.89!MBNL3;;chr20:306177..306211,+!p2@SOX12!0.86!45.58!SOX12;;chr4:4291837..4291859,-!p2@LYAR!0.86!21.35!LYAR;;chr7:156803329..156803362,-!p1@MNX1!0.86!6.18!MNX1;;chr5:133450365..133450444,+!p1@TCF7!0.85!29.67!TCF7;;chr20:22566120..22566136,-!p4@FOXA2!0.85!6.02!FOXA2;;chr10:97889464..97889494,+!p3@ZNF518A!0.84!11.54!ZNF518A;;chr1:214161358..214161377,+!p3@PROX1!0.84!5.93!PROX1;;chr2:180427261..180427297,-!p6@ZNF385B!0.84!5.85!ZNF385B;;chr2:180427304..180427323,-!p7@ZNF385B!0.84!5.85!ZNF385B;;chr2:171571909..171571920,+!p9@SP5!0.83!5.77!SP5;;chr6:41514078..41514158,+!p1@FOXP4!0.82!54.39!FOXP4;;chr20:42295745..42295765,+!p1@MYBL2!0.81!96.34!MYBL2;;chr12:3068544..3068597,+!p1@TEAD4!0.81!35.11!TEAD4;;chr17:41277372..41277418,-!p1@BRCA1!0.81!21.43!BRCA1;;chr7:96635178..96635181,+!p1@DLX6!0.81!5.44!DLX6;;chr6:20402102..20402152,+!p1@E2F3!0.80!23.32!E2F3;;chr18:55102628..55102646,+!p2@ONECUT2!0.80!5.27!ONECUT2;;chr6:155635583..155635644,-!p1@TFB1M!0.79!73.43!TFB1M;;chr20:32274179..32274213,-!p1@E2F1!0.79!37.42!E2F1;;chr15:76629123..76629151,+!p1@ISL2!0.79!5.77!ISL2;;chr2:171572729..171572745,+!p10@SP5!0.79!5.19!SP5;;chr18:55102598..55102623,+!p1@ONECUT2!0.79!5.11!ONECUT2;;chr20:306489..306564,+!p1@SOX12!0.78!60.25!SOX12;;chr8:71316428..71316459,-!p2@NCOA2!0.78!8.90!NCOA2;;chr9:127533519..127533573,-!p2@NR6A1!0.78!6.26!NR6A1;;chr19:4153613..4153652,+!p1@CREB3L3!0.78!5.03!CREB3L3;;chr20:30193083..30193098,+!p1@ID1!0.77!439.77!ID1;;chrX:131624020..131624048,-!p9@MBNL3!0.77!6.02!MBNL3;;chr2:178129619..178129633,-!p16@NFE2L2!0.77!4.94!NFE2L2;;chr7:101917407..101917443,+!p3@CUX1!0.77!4.86!CUX1;;chr16:51185318..51185348,-!p2@SALL1!0.77!4.86!SALL1;;chr18:6414884..6414942,-!p1@L3MBTL4!0.76!6.10!L3MBTL4;;chr12:66358080..66358094,+!p15@HMGA2!0.76!4.78!HMGA2;;chr1:201979703..201979721,+!p2@ELF3!0.76!4.78!ELF3;;chr20:22565370..22565388,-!p2@FOXA2!0.76!4.78!FOXA2;;chr20:43029970..43029990,+!p4@HNF4A!0.76!4.70!HNF4A;;chr10:51565239..51565263,+!p2@NCOA4!0.74!117.85!NCOA4;;chr3:119500941..119500961,+!p1@NR1I2!0.74!4.53!NR1I2;;chr3:24536253..24536328,-!p1@THRB!0.73!8.74!THRB;;chr2:63277978..63277995,+!p2@OTX1!0.73!4.37!OTX1;;chr19:12444440..12444455,-!p1@ZNF563!0.72!7.91!ZNF563;;chr12:54694807..54694832,-!p3@NFE2!0.72!4.29!NFE2;;chr2:178129680..178129691,-!p35@NFE2L2!0.72!4.20!NFE2L2;;chr2:42721205..42721307,+!p4@MTA3!0.72!4.20!MTA3;;chr4:4861385..4861398,+!p1@MSX1!0.71!13.43!MSX1;;chr17:47492203..47492214,-!p3@PHB!0.71!6.92!PHB;;chr3:40547564..40547616,+!p1@ZNF620!0.71!6.10!ZNF620;;chr19:12163769..12163798,-!p1@ZNF878!0.71!5.60!ZNF878;;chr8:71316403..71316427,-!p6@NCOA2!0.71!5.11!NCOA2;;chr7:101917447..101917479,+!p4@CUX1!0.71!4.12!CUX1;;chr12:100867777..100867788,+!p5@NR1H4!0.71!4.12!NR1H4;;chrY:2803415..2803468,+!p1@ZFY!0.71!4.12!ZFY;;chr1:61547894..61547968,+!p2@NFIA!0.70!12.77!NFIA;;chr16:54320158..54320200,-!p5@IRX3!0.70!6.02!IRX3;;chrX:131623026..131623039,-!p5@MBNL3!0.70!4.04!MBNL3;;chr11:19262421..19262455,-!p3@E2F8!0.70!4.04!E2F8;;chr12:66218420..66218439,+!p12@HMGA2!0.70!4.04!HMGA2;;chr7:96634850..96634874,+!p3@DLX6!0.70!3.96!DLX6;;chr17:41623009..41623053,-!p4@ETV4!0.69!6.76!ETV4;;chr19:12551785..12551823,-!p1@ZNF443!0.69!6.76!ZNF443;;chr22:29196492..29196503,-!p3@XBP1!0.69!6.35!XBP1;;chr9:127533582..127533615,-!p1@NR6A1!0.69!6.10!NR6A1;;chr2:10091815..10091864,+!p1@GRHL1!0.69!5.44!GRHL1;;chr11:19263160..19263176,-!p1@E2F8!0.69!4.70!E2F8;;chr17:36105042..36105060,-!p1@HNF1B!0.69!3.87!HNF1B;;chr7:96634878..96634900,+!p2@DLX6!0.69!3.87!DLX6;;chr16:54320675..54320715,-!p1@IRX3!0.68!8.98!IRX3;;chr15:85144307..85144329,+!p2@ZSCAN2!0.68!4.45!ZSCAN2;;chr17:53342451..53342471,+!p4@HLF!0.68!3.79!HLF;;chr19:19281060..19281078,-!p2@MEF2BNB-MEF2B,p2@MEF2B!0.68!3.79!MEF2B;;chr2:171572483..171572501,+!p5@SP5!0.68!3.79!SP5;;chr12:3068668..3068689,+!p7@TEAD4!0.68!3.79!TEAD4;;chr19:925727..925784,+!p3@ARID3A!0.67!8.65!ARID3A;;chr5:76383133..76383186,-!p2@ZBED3!0.67!8.24!ZBED3;;chr10:70320074..70320106,+!p1@TET1!0.67!8.16!TET1;;chr1:23857698..23857733,-!p1@E2F2!0.67!7.34!E2F2;;chr19:12512015..12512044,-!p2@ZNF799!0.67!5.69!ZNF799;;chr17:41622982..41623001,-!p11@ETV4!0.67!3.71!ETV4;;chr17:48045917..48045977,+!p1@DLX4!0.67!3.71!DLX4;;chr1:151804244..151804310,-!p1@RORC!0.67!3.63!RORC;;chr1:92952473..92952489,-!p3@GFI1!0.67!3.63!GFI1;;chr2:171572525..171572547,+!p6@SP5!0.67!3.63!SP5;;chr6:1312155..1312187,+!p2@FOXQ1!0.67!3.63!FOXQ1;;chr3:71630980..71631110,-!p3@FOXP1!0.66!14.09!FOXP1;;chr2:75937794..75937867,-!p2@GCFC2!0.66!8.82!GCFC2;;chr16:54320646..54320672,-!p2@IRX3!0.66!5.77!IRX3;;chr22:29196547..29196563,-!p2@XBP1!0.65!150.49!XBP1;;chrX:128657413..128657456,-!p2@SMARCA1!0.65!35.19!SMARCA1;;chr8:145669791..145669834,-!p1@TONSL!0.65!11.29!TONSL;;chr17:41623634..41623645,-!p15@ETV4!0.65!3.46!ETV4;;chr4:4291861..4291913,-!p1@LYAR!0.64!92.80!LYAR;;chr1:45805872..45805900,+!p2@TOE1!0.64!9.07!TOE1;;chr2:71127699..71127744,+!p1@VAX2!0.64!7.66!VAX2;;chr12:115121962..115121987,-!p1@TBX3!0.63!32.31!TBX3;;chr5:172662197..172662216,-!p1@NKX2-5!0.63!3.30!NKX2-5;;chr6:1312688..1312701,+!p3@FOXQ1!0.63!3.30!FOXQ1;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chr12:125002861..125002894,-!p7@NCOR2!0.22!1.40!NCOR2;;chr10:98592776..98592796,+!p4@LCOR!0.22!1.32!LCOR;;chr6:122720837..122720857,+!p2@HSF2!0.22!1.32!HSF2;;chrX:131623932..131623964,-!p7@MBNL3!0.22!1.32!MBNL3;;chr4:146859887..146859921,-!p3@ZNF827!0.22!1.32!ZNF827;;chr8:86089341..86089362,+!p5@E2F5!0.22!1.24!E2F5;;chrX:119384749..119384763,+!p4@ZBTB33!0.22!1.15!ZBTB33;;chr10:97890311..97890324,+!p6@ZNF518A!0.22!0.99!ZNF518A;;chr20:62601309..62601320,-!p2@ZNF512B!0.22!0.99!ZNF512B;;chr19:39390697..39390713,+!p4@NFKBIB!0.22!0.82!NFKBIB;;chr19:38183103..38183114,-!p5@ZNF781!0.22!0.66!ZNF781;;chr19:57327900..57327911,-!p14@PEG3!0.22!0.66!PEG3;;chr1:8763573..8763584,-!p30@RERE!0.22!0.66!RERE;;chr16:30616396..30616400,-!p4@ZNF689!0.22!0.66!ZNF689;;chr17:17740823..17740833,-!p8@SREBF1!0.22!0.66!SREBF1;;chr2:178129853..178129860,-!p14@NFE2L2!0.22!0.66!NFE2L2;;chr3:141151044..141151053,+!p51@ZBTB38!0.22!0.66!ZBTB38;;chr3:39196049..39196062,-!p5@CSRNP1!0.22!0.66!CSRNP1;;chr12:2968536..2968539,-!p3@FOXM1!0.22!0.66!FOXM1;;chr12:54393880..54393962,+!p1@HOXC9!0.22!0.66!HOXC9;;chr14:35874125..35874149,-!p11@NFKBIA!0.22!0.66!NFKBIA;;chr14:38064495..38064506,-!p4@FOXA1!0.22!0.66!FOXA1;;chr6:41703952..41703994,-!p4@TFEB!0.22!0.66!TFEB;;chr9:115819058..115819082,-!p2@ZFP37!0.22!0.66!ZFP37;;chr2:43453734..43453751,-!p1@ZFP36L2!0.21!157.25!ZFP36L2;;chr1:90460661..90460745,+!p1@ZNF326!0.21!41.04!ZNF326;;chr14:21945335..21945419,+!p1@TOX4!0.21!37.75!TOX4;;chr6:170863423..170863484,+!p1@TBP!0.21!30.08!TBP;;chr19:24216213..24216314,+!p1@ZNF254!0.21!24.97!ZNF254;;chr2:113012592..113012671,-!p1@ZC3H8!0.21!24.64!ZC3H8;;chr16:31885093..31885165,+!p1@ZNF267!0.21!22.09!ZNF267;;chr10:98592009..98592061,+!p1@C10orf12,p1@LCOR!0.21!20.52!LCOR;;chr20:61493117..61493187,-!p1@TCFL5!0.21!16.07!TCFL5;;chr4:47916588..47916607,-!p1@NFXL1!0.21!11.46!NFXL1;;chr11:76092097..76092183,-!p1@PRKRIR!0.21!11.13!PRKRIR;;chr4:140005443..140005527,-!p2@ELF2!0.21!7.99!ELF2;;chr2:70142232..70142251,+!p1@MXD1!0.21!7.58!MXD1;;chr7:64363638..64363667,+!p1@ZNF273!0.21!6.68!ZNF273;;chr19:12267524..12267564,-!p1@ZNF20,p1@ZNF625!0.21!6.35!ZNF20;;chr9:86594530..86594564,-!p@chr9:86594530..86594564,-!0.21!4.86!HNRPK;;chr16:2059754..2059777,-!p2@ZNF598!0.21!4.37!ZNF598;;chr1:40997285..40997352,+!p1@ZNF684!0.21!4.37!ZNF684;;chr1:35656508..35656584,-!p2@SFPQ!0.21!3.87!SFPQ;;chr6:12008986..12009016,+!p3@HIVEP1!0.21!3.79!HIVEP1;;chr14:21994449..21994524,-!p2@SALL2!0.21!3.63!SALL2;;chr19:42759300..42759324,-!p2@ERF!0.21!2.97!ERF;;chr2:187350951..187350962,+!p2@ZC3H15!0.21!2.72!ZC3H15;;chr1:35656397..35656455,-!p3@SFPQ!0.21!2.64!SFPQ;;chr19:21203481..21203504,+!p2@ZNF430!0.21!2.64!ZNF430;;chr14:89628064..89628109,-!p4@FOXN3!0.21!2.23!FOXN3;;chr19:21512115..21512135,-!p3@ZNF708!0.21!2.23!ZNF708;;chr17:42297282..42297300,-!p9@UBTF!0.21!1.81!UBTF;;chr8:124286670..124286702,-!p3@ZHX1!0.21!1.73!ZHX1;;chrX:119384566..119384585,+!p2@ZBTB33!0.21!1.57!ZBTB33;;chr17:47439354..47439383,-!p3@ZNF652!0.21!1.57!ZNF652;;chr11:47270477..47270494,+!p4@NR1H3!0.21!1.32!NR1H3;;chr12:49446120..49446135,-!p4@MLL2!0.21!1.15!MLL2;;chr6:151712922..151712942,-!p6@ZBTB2!0.21!1.15!ZBTB2;;chr16:29817199..29817222,+!p17@MAZ!0.21!1.07!MAZ;;chr16:69727150..69727178,+!p7@NFAT5!0.21!0.82!NFAT5;;chr19:40503013..40503044,+!p3@ZNF546!0.21!0.82!ZNF546;;chr17:42295955..42295964,-!p22@UBTF!0.21!0.74!UBTF;;chr6:41555169..41555196,+!p6@FOXP4!0.21!0.74!FOXP4;;chr18:32924372..32924430,-!p1@ZNF24!0.20!43.10!ZNF24;;chr19:33864600..33864732,+!p1@CEBPG!0.20!40.05!CEBPG;;chr19:11071685..11071798,+!p1@SMARCA4!0.20!39.89!SMARCA4;;chr16:88636795..88636827,+!p1@ZC3H18!0.20!34.37!ZC3H18;;chr6:33422343..33422394,+!p1@ZBTB9!0.20!8.90!ZBTB9;;chr19:56826201..56826247,-!p1@ZSCAN5A!0.20!8.74!ZSCAN5A;;chr19:56152437..56152467,+!p3@ZNF580!0.20!6.68!ZNF580;;chr17:5095126..5095169,-!p1@ZNF594!0.20!5.36!ZNF594;;chrX:131623044..131623089,-!p1@MBNL3!0.20!5.19!MBNL3;;chr18:45457478..45457517,-!p6@SMAD2!0.20!3.38!SMAD2;;chr9:137218362..137218385,+!p4@RXRA!0.20!3.05!RXRA;;chr12:72058060..72058101,+!p5@THAP2!0.20!2.72!THAP2;;chr22:42229210..42229229,+!p3@SREBF2!0.20!2.55!SREBF2;;chr19:21950332..21950356,-!p2@ZNF100!0.20!2.23!ZNF100;;chr19:56652621..56652641,+!p2@ZNF444!0.20!2.23!ZNF444;;chr11:695215..695231,-!p2@DEAF1!0.20!1.90!DEAF1;;chr18:19749517..19749531,+!p3@GATA6!0.20!1.73!GATA6;;chr4:38665753..38665757,+!p7@KLF3!0.20!1.57!KLF3;;chr8:71316222..71316259,-!p5@NCOA2!0.20!1.48!NCOA2;;chr20:52185283..52185294,-!p5@ZNF217!0.20!0.99!ZNF217;;chr12:80083544..80083558,-!p13@PAWR!0.20!0.99!PAWR;;chr19:44764031..44764072,+!p1@ZNF233!0.20!0.91!ZNF233;;chr19:38210552..38210570,-!p2@ZNF607!0.20!0.58!ZNF607;;chr19:50832895..50832928,+!p3@NR1H2!0.20!0.58!NR1H2;;chr1:3568961..3568973,+!p6@TP73!0.20!0.58!TP73;;chr1:92951607..92951661,-!p1@GFI1!0.20!0.58!GFI1;;chr20:50808639..50808661,-!p6@ZFP64!0.20!0.58!ZFP64;;chr6:35464729..35464738,-!p3@TEAD3!0.20!0.58!TEAD3;;chr7:27170274..27170308,-!p3@HOXA4!0.20!0.58!HOXA4;;chr7:96635277..96635301,+!p7@DLX6!0.20!0.58!DLX6;;chr7:96635448..96635470,+!p5@DLX6!0.20!0.58!DLX6;;chr7:96635665..96635685,+!p6@DLX6!0.20!0.58!DLX6;;chr8:128747729..128747748,+!p14@MYC!0.20!0.58!MYC;;chr22:22863031..22863050,-!p2@ZNF280B!0.20!0.58!ZNF280B;;chr3:12329339..12329356,+!p5@PPARG!0.20!0.58!PPARG;;chr3:52002412..52002433,-!p7@PCBP4!0.20!0.58!PCBP4;;chr13:37494248..37494260,-!p3@SMAD9!0.20!0.58!SMAD9;;chr15:76629064..76629073,+!p3@ISL2!0.20!0.58!ISL2;;chr16:69681215..69681227,+!p17@NFAT5!0.20!0.58!NFAT5;;chr7:148892653..148892729,+!p1@ZNF282!0.19!19.86!ZNF282;;chr12:52445218..52445237,+!p1@NR4A1!0.19!17.22!NR4A1;;chr1:205601093..205601158,-!p1@ELK4!0.19!11.95!ELK4;;chr11:67007477..67007493,+!p2@KDM2A!0.19!11.29!KDM2A;;chr17:33288552..33288598,+!p1@ZNF830!0.19!10.22!ZNF830;;chr16:30406721..30406820,+!p1@ZNF48!0.19!6.84!ZNF48;;chr4:140005341..140005411,-!p3@ELF2!0.19!6.76!ELF2;;chr10:43134001..43134026,-!p1@ZNF33B!0.19!5.60!ZNF33B;;chr17:42297028..42297056,-!p3@UBTF!0.19!4.86!UBTF;;chr20:47894936..47895010,-!p2@ZNFX1!0.19!3.79!ZNFX1;;chr6:28367510..28367537,-!p1@ZSCAN12!0.19!3.63!ZSCAN12;;chr19:53445819..53445860,-!p2@ZNF321P,p2@ZNF816-ZNF321P,p2@ZNF816!0.19!3.46!ZNF321P;;chr1:42800848..42800859,-!p2@FOXJ3!0.19!3.13!FOXJ3;;chr1:8763463..8763499,-!p6@RERE!0.19!3.05!RERE;;chr19:52552051..52552113,-!p1@ZNF432!0.19!2.14!ZNF432;;chr1:204042215..204042228,+!p2@SOX13!0.19!2.14!SOX13;;chr20:49547766..49547785,-!p5@ADNP!0.19!2.14!ADNP;;chr7:64126535..64126559,+!p2@ZNF107!0.19!2.14!ZNF107;;chr3:40566488..40566502,+!p3@ZNF621!0.19!1.73!ZNF621;;chr3:141820622..141820635,-!p5@TFDP2!0.19!1.65!TFDP2;;chr16:1429674..1429703,-!p3@UNKL!0.19!1.48!UNKL;;chr9:2015275..2015287,+!p8@SMARCA2!0.19!1.40!SMARCA2;;chr1:41157326..41157337,+!p5@NFYC!0.19!1.32!NFYC;;chr1:935496..935509,-!p3@HES4!0.19!1.32!HES4;;chr19:58874112..58874125,-!p1@ZNF497,p5@A1BG!0.19!1.15!ZNF497;;chr16:89787436..89787450,+!p4@ZNF276!0.19!1.07!ZNF276;;chr20:42136308..42136358,+!p2@L3MBTL1!0.19!0.99!L3MBTL;;chr12:80084137..80084165,-!p10@PAWR!0.19!0.99!PAWR;;chr14:24025106..24025172,-!p2@ZFHX2!0.19!0.99!ZFHX2;;chr15:37392094..37392116,-!p6@MEIS2!0.19!0.91!MEIS2;;chr2:66662895..66662907,+!p3@MEIS1!0.19!0.91!MEIS1;;chr6:43140095..43140145,+!p5@SRF!0.19!0.91!SRF;;chr1:43148716..43148756,+!p6@YBX1!0.19!0.91!YBX1;;chr16:30407021..30407061,+!p3@ZNF48!0.19!0.74!ZNF48;;chr12:3068196..3068232,+!p9@TEAD4!0.19!0.66!TEAD4;;chr13:114238997..114239077,+!p1@TFDP1!0.18!68.41!TFDP1;;chr19:56632592..56632670,-!p1@ZNF787!0.18!30.25!ZNF787;;chr3:187463248..187463264,-!p1@BCL6!0.18!28.76!BCL6;;chr3:33481835..33481905,-!p1@UBP1!0.18!23.08!UBP1;;chr22:41601296..41601355,+!p1@L3MBTL2!0.18!15.08!L3MBTL2;;chr12:54020107..54020196,-!p1@ATF7!0.18!12.53!ATF7;;chr3:44519131..44519186,-!p1@ZNF445!0.18!7.01!ZNF445;;chr16:3285144..3285191,-!p1@ZNF200!0.18!5.93!ZNF200;;chr12:57400261..57400344,-!p1@ZBTB39!0.18!5.69!ZBTB39;;chr19:19496624..19496660,+!p3@GATAD2A!0.18!5.52!GATAD2A;;chr14:89029336..89029363,+!p2@ZC3H14!0.18!4.78!ZC3H14;;chr19:23869970..23869991,-!p1@ZNF675!0.18!4.45!ZNF675;;chr19:22034809..22034878,-!p2@ZNF43!0.18!4.04!ZNF43;;chr19:36705617..36705644,+!p4@ZNF146!0.18!3.13!ZNF146;;chr12:72057747..72057854,+!p4@THAP2!0.18!2.97!THAP2;;chr1:40942922..40942997,+!p1@ZNF642!0.18!2.80!ZNF642;;chr19:47615426..47615439,-!p5@ZC3H4!0.18!2.39!ZC3H4;;chr12:19671171..19671175,+!p4@AEBP2!0.18!2.39!AEBP2;;chr2:174830043..174830071,-!p6@SP3!0.18!2.14!SP3;;chr1:42800836..42800847,-!p3@FOXJ3!0.18!1.90!FOXJ3;;chr17:61920116..61920131,-!p5@SMARCD2!0.18!1.81!SMARCD2;;chr19:12203069..12203094,+!p2@ZNF788!0.18!1.15!ZNF788;;chr9:99180662..99180690,-!p2@ZNF367!0.18!1.07!ZNF367;; |
Revision as of 13:54, 29 June 2012
Name: | hepatocellular carcinoma cell line: HepG2 ENCODE, biol_rep2 |
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Species: | |
Library ID: | {{{library_id}}} |
Sample type: | {{{sample_category}}} |
Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000210 human sample
FF:0100599 Hep-G2 cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000723 (somatic stem cell)
0000048 (multi fate stem cell)
0000548 (animal cell)
0000034 (stem cell)
0002321 (embryonic cell)
0002320 (connective tissue cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000219 (motile cell)
0000181 (metabolising cell)
0000417 (endopolyploid cell)
0000668 (parenchymal cell)
0000134 (mesenchymal cell)
0000412 (polyploid cell)
0000255 (eukaryotic cell)
0000182 (hepatocyte)
0000223 (endodermal cell)
DOID: Disease
4 (disease)
162 (cancer)
14566 (disease of cellular proliferation)
0050687 (cell type cancer)
7 (disease of anatomical entity)
305 (carcinoma)
UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0002107 (liver)
0002100 (trunk)
0000483 (epithelium)
0002530 (gland)
0002384 (connective tissue)
0000926 (mesoderm)
0000479 (tissue)
0001007 (digestive system)
0000077 (mixed endoderm/mesoderm-derived structure)
0002368 (endocrine gland)
0000466 (immaterial anatomical entity)
0000062 (organ)
0004111 (anatomical conduit)
0000475 (organism subdivision)
0004120 (mesoderm-derived structure)
0000025 (tube)
0004119 (endoderm-derived structure)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000480 (anatomical group)
0000923 (germ layer)
0003914 (epithelial tube)
0007499 (epithelial sac)
0002050 (embryonic structure)
0005911 (endo-epithelium)
0004921 (subdivision of digestive tract)
0005423 (developing anatomical structure)
0000477 (anatomical cluster)
0000481 (multi-tissue structure)
0000467 (anatomical system)
0001062 (anatomical entity)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0009569 (subdivision of trunk)
0005291 (embryonic tissue)
0009854 (digestive tract diverticulum)
0003929 (gut epithelium)
0005177 (trunk region element)
0002365 (exocrine gland)
0003104 (mesenchyme)
0005057 (immune organ)
0005172 (abdomen element)
0006925 (digestive gland)
0005256 (trunk mesenchyme)
0001048 (primordium)
0000925 (endoderm)
0006598 (presumptive structure)
0009497 (epithelium of foregut-midgut junction)
0004185 (endodermal part of digestive tract)
0005173 (abdominal segment element)
0000015 (anatomical boundary)
0009856 (sac)
0002532 (epiblast (generic))
0001555 (digestive tract)
0002417 (abdominal segment of trunk)
0007026 (primitive gut)
0001041 (foregut)
0000949 (endocrine system)
0002330 (exocrine system)
0000916 (abdomen)
0002405 (immune system)
0002423 (hepatobiliary system)
0009142 (entire embryonic mesenchyme)
0006235 (foregut-midgut junction)
0006595 (presumptive endoderm)
0006603 (presumptive mesoderm)
0008835 (hepatic diverticulum)
0003894 (liver primordium)
0004161 (septum transversum)
0008836 (liver bud)
FF: FANTOM5
NA
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA