FFCP PHASE1:Hg19::chr6:34204921..34204939,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000548!2.20e-46!679;CL:0000004!2.20e-46!679;CL:0000255!2.20e-46!679;CL:0000012!1.53e-45!682;CL:0000144!1.77e-32!625;CL:0002371!8.73e-28!591;CL:0000003!3.19e-27!722;CL:0000222!1.97e-25!119;CL:0002321!5.72e-25!248;CL:0000220!5.74e-25!246;CL:0000055!4.04e-24!180;CL:0000066!1.03e-15!254;CL:0000183!3.09e-15!59;CL:0000063!3.68e-15!578;CL:0000680!4.57e-14!57;CL:0000056!4.57e-14!57;CL:0000355!4.57e-14!57;CL:0000393!6.92e-14!60;CL:0000211!6.92e-14!60;CL:0000187!7.68e-14!54;CL:0000192!7.04e-13!42;CL:0000514!7.04e-13!42;CL:0000115!1.56e-12!35;CL:0002139!7.95e-12!24;CL:0002078!2.00e-11!44;CL:0000359!5.68e-11!32;CL:0000071!6.74e-11!18;CL:0002546!6.74e-11!18;CL:0000213!9.96e-11!57;CL:0000215!9.96e-11!57;CL:0000057!2.11e-09!75;CL:0000076!3.07e-09!62;CL:1000449!8.31e-09!16;CL:0002681!2.98e-07!13;CL:0002584!2.98e-07!13;CL:1000497!3.31e-07!18;CL:0002518!3.31e-07!18;CL:1000507!5.39e-07!12;CL:1000494!5.39e-07!12 | |ontology_enrichment_celltype=CL:0000548!2.20e-46!679;CL:0000004!2.20e-46!679;CL:0000255!2.20e-46!679;CL:0000012!1.53e-45!682;CL:0000144!1.77e-32!625;CL:0002371!8.73e-28!591;CL:0000003!3.19e-27!722;CL:0000222!1.97e-25!119;CL:0002321!5.72e-25!248;CL:0000220!5.74e-25!246;CL:0000055!4.04e-24!180;CL:0000066!1.03e-15!254;CL:0000183!3.09e-15!59;CL:0000063!3.68e-15!578;CL:0000680!4.57e-14!57;CL:0000056!4.57e-14!57;CL:0000355!4.57e-14!57;CL:0000393!6.92e-14!60;CL:0000211!6.92e-14!60;CL:0000187!7.68e-14!54;CL:0000192!7.04e-13!42;CL:0000514!7.04e-13!42;CL:0000115!1.56e-12!35;CL:0002139!7.95e-12!24;CL:0002078!2.00e-11!44;CL:0000359!5.68e-11!32;CL:0000071!6.74e-11!18;CL:0002546!6.74e-11!18;CL:0000213!9.96e-11!57;CL:0000215!9.96e-11!57;CL:0000057!2.11e-09!75;CL:0000076!3.07e-09!62;CL:1000449!8.31e-09!16;CL:0002681!2.98e-07!13;CL:0002584!2.98e-07!13;CL:1000497!3.31e-07!18;CL:0002518!3.31e-07!18;CL:1000507!5.39e-07!12;CL:1000494!5.39e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002139;7.73e-12;24!CL:0000115;4.94e-11;36!CL:0000071;6.61e-11;18!CL:0000359;1.80e-10;32!CL:0000192;1.20e-09;43!CL:1000449;6.28e-09;15!CL:0000187;3.74e-08;55!CL:0002078;6.81e-08;45!CL:0002681;2.28e-07;12!CL:0002584;2.28e-07;12!CL:0000213;2.59e-07;58!CL:0000215;2.59e-07;58!CL:1000497;3.09e-07;17!CL:0002518;3.09e-07;17!CL:0000393;3.93e-07;61!CL:0000211;3.93e-07;61 | |ontology_enrichment_celltype_v019=CL:0002139;7.73e-12;24!CL:0000115;4.94e-11;36!CL:0000071;6.61e-11;18!CL:0000359;1.80e-10;32!CL:0000192;1.20e-09;43!CL:1000449;6.28e-09;15!CL:0000187;3.74e-08;55!CL:0002078;6.81e-08;45!CL:0002681;2.28e-07;12!CL:0002584;2.28e-07;12!CL:0000213;2.59e-07;58!CL:0000215;2.59e-07;58!CL:1000497;3.09e-07;17!CL:0002518;3.09e-07;17!CL:0000393;3.93e-07;61!CL:0000211;3.93e-07;61 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.68e-26,121;CL:0002321,1.20e-25,250;CL:0000066,1.14e-15,253;CL:0000680,3.86e-14,58;CL:0000056,3.86e-14,58;CL:0000355,3.86e-14,58;CL:0000393,5.77e-14,61;CL:0000211,5.77e-14,61;CL:0000187,6.54e-14,55;CL:0000115,4.67e-13,36;CL:0000192,6.85e-13,43;CL:0000514,6.85e-13,43;CL:0002078,6.50e-12,45;CL:0002139,7.90e-12,24;CL:0000213,3.54e-11,58;CL:0000215,3.54e-11,58;CL:0000359,5.64e-11,32;CL:0000071,6.71e-11,18;CL:0002546,6.71e-11,18;CL:0000076,1.69e-09,63;CL:0000057,3.86e-09,76;CL:1000449,6.33e-09,15;CL:0002681,2.29e-07,12;CL:0002584,2.29e-07,12;CL:1000497,3.08e-07,17;CL:0002518,3.08e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;6.61e-11;18!CL:0000514;1.20e-09;43!CL:0000222;5.29e-08;121!CL:0000355;8.61e-08;58 | |ontology_enrichment_development_v019=CL:0002546;6.61e-11;18!CL:0000514;1.20e-09;43!CL:0000222;5.29e-08;121!CL:0000355;8.61e-08;58 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.32e-20!79;UBERON:0007798!5.32e-20!79;UBERON:0000055!3.39e-19!69;UBERON:0001981!3.78e-17!60;UBERON:0007500!3.78e-17!60;UBERON:0004537!3.78e-17!60;UBERON:0006965!3.78e-17!60;UBERON:0000914!1.00e-16!83;UBERON:0002329!1.00e-16!83;UBERON:0003077!1.00e-16!83;UBERON:0003059!1.00e-16!83;UBERON:0007282!1.00e-16!83;UBERON:0009618!1.00e-16!83;UBERON:0007285!1.00e-16!83;UBERON:0001637!2.28e-16!42;UBERON:0003509!2.28e-16!42;UBERON:0004572!2.28e-16!42;UBERON:0004290!1.49e-15!70;UBERON:0003914!4.20e-15!118;UBERON:0005256!1.15e-14!143;UBERON:0000490!2.48e-14!138;UBERON:0000486!2.66e-14!82;UBERON:0004872!2.50e-13!84;UBERON:0004573!4.34e-12!33;UBERON:0004571!4.34e-12!33;UBERON:0001134!7.59e-12!61;UBERON:0002036!7.59e-12!61;UBERON:0003082!7.59e-12!61;UBERON:0002100!3.47e-11!216;UBERON:0000487!5.95e-11!22;UBERON:0001986!6.74e-11!18;UBERON:0004638!6.74e-11!18;UBERON:0004852!6.74e-11!18;UBERON:0002385!1.29e-10!63;UBERON:0001015!1.29e-10!63;UBERON:0000383!1.29e-10!63;UBERON:0003104!2.31e-10!238;UBERON:0009142!2.31e-10!238;UBERON:0004535!4.79e-10!110;UBERON:0000926!4.40e-09!448;UBERON:0004120!4.40e-09!448;UBERON:0006603!4.40e-09!448;UBERON:0001009!5.24e-09!113;UBERON:0006914!6.19e-09!25;UBERON:0004211!8.31e-09!16;UBERON:0001285!8.31e-09!16;UBERON:0007684!8.31e-09!16;UBERON:0003220!8.31e-09!16;UBERON:0004208!8.31e-09!16;UBERON:0000119!1.74e-07!312;UBERON:0006555!1.85e-07!17;UBERON:0005103!1.85e-07!17;UBERON:0000083!1.85e-07!17;UBERON:0009201!1.85e-07!17;UBERON:0004819!1.85e-07!17;UBERON:0006553!1.85e-07!17;UBERON:0003074!1.85e-07!17;UBERON:0003060!1.85e-07!17;UBERON:0000947!2.53e-07!21;UBERON:0010191!2.53e-07!21;UBERON:0001225!2.98e-07!13;UBERON:0008987!2.98e-07!13;UBERON:0009773!5.39e-07!12;UBERON:0001231!5.39e-07!12;UBERON:0004810!5.39e-07!12;UBERON:0000483!7.02e-07!309 | |ontology_enrichment_uberon=UBERON:0002049!5.32e-20!79;UBERON:0007798!5.32e-20!79;UBERON:0000055!3.39e-19!69;UBERON:0001981!3.78e-17!60;UBERON:0007500!3.78e-17!60;UBERON:0004537!3.78e-17!60;UBERON:0006965!3.78e-17!60;UBERON:0000914!1.00e-16!83;UBERON:0002329!1.00e-16!83;UBERON:0003077!1.00e-16!83;UBERON:0003059!1.00e-16!83;UBERON:0007282!1.00e-16!83;UBERON:0009618!1.00e-16!83;UBERON:0007285!1.00e-16!83;UBERON:0001637!2.28e-16!42;UBERON:0003509!2.28e-16!42;UBERON:0004572!2.28e-16!42;UBERON:0004290!1.49e-15!70;UBERON:0003914!4.20e-15!118;UBERON:0005256!1.15e-14!143;UBERON:0000490!2.48e-14!138;UBERON:0000486!2.66e-14!82;UBERON:0004872!2.50e-13!84;UBERON:0004573!4.34e-12!33;UBERON:0004571!4.34e-12!33;UBERON:0001134!7.59e-12!61;UBERON:0002036!7.59e-12!61;UBERON:0003082!7.59e-12!61;UBERON:0002100!3.47e-11!216;UBERON:0000487!5.95e-11!22;UBERON:0001986!6.74e-11!18;UBERON:0004638!6.74e-11!18;UBERON:0004852!6.74e-11!18;UBERON:0002385!1.29e-10!63;UBERON:0001015!1.29e-10!63;UBERON:0000383!1.29e-10!63;UBERON:0003104!2.31e-10!238;UBERON:0009142!2.31e-10!238;UBERON:0004535!4.79e-10!110;UBERON:0000926!4.40e-09!448;UBERON:0004120!4.40e-09!448;UBERON:0006603!4.40e-09!448;UBERON:0001009!5.24e-09!113;UBERON:0006914!6.19e-09!25;UBERON:0004211!8.31e-09!16;UBERON:0001285!8.31e-09!16;UBERON:0007684!8.31e-09!16;UBERON:0003220!8.31e-09!16;UBERON:0004208!8.31e-09!16;UBERON:0000119!1.74e-07!312;UBERON:0006555!1.85e-07!17;UBERON:0005103!1.85e-07!17;UBERON:0000083!1.85e-07!17;UBERON:0009201!1.85e-07!17;UBERON:0004819!1.85e-07!17;UBERON:0006553!1.85e-07!17;UBERON:0003074!1.85e-07!17;UBERON:0003060!1.85e-07!17;UBERON:0000947!2.53e-07!21;UBERON:0010191!2.53e-07!21;UBERON:0001225!2.98e-07!13;UBERON:0008987!2.98e-07!13;UBERON:0009773!5.39e-07!12;UBERON:0001231!5.39e-07!12;UBERON:0004810!5.39e-07!12;UBERON:0000483!7.02e-07!309 | ||
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| ||
|short_description=p3@HMGA1 | |short_description=p3@HMGA1 | ||
}} | }} |
Revision as of 17:25, 15 November 2012
Short description: | p3@HMGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_HMGA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -41bp_to_ENST00000478214, uc010jvl.2_5end |
EntrezGene: | 100130009,3159 |
HGNC: | 5010 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.68e-26 | 121 |
embryonic cell | 1.20e-25 | 250 |
epithelial cell | 1.14e-15 | 253 |
muscle precursor cell | 3.86e-14 | 58 |
myoblast | 3.86e-14 | 58 |
multi-potent skeletal muscle stem cell | 3.86e-14 | 58 |
electrically responsive cell | 5.77e-14 | 61 |
electrically active cell | 5.77e-14 | 61 |
muscle cell | 6.54e-14 | 55 |
endothelial cell | 4.67e-13 | 36 |
smooth muscle cell | 6.85e-13 | 43 |
smooth muscle myoblast | 6.85e-13 | 43 |
meso-epithelial cell | 6.50e-12 | 45 |
endothelial cell of vascular tree | 7.90e-12 | 24 |
lining cell | 3.54e-11 | 58 |
barrier cell | 3.54e-11 | 58 |
vascular associated smooth muscle cell | 5.64e-11 | 32 |
blood vessel endothelial cell | 6.71e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.71e-11 | 18 |
squamous epithelial cell | 1.69e-09 | 63 |
fibroblast | 3.86e-09 | 76 |
epithelial cell of nephron | 6.33e-09 | 15 |
kidney cortical cell | 2.29e-07 | 12 |
renal cortical epithelial cell | 2.29e-07 | 12 |
kidney cell | 3.08e-07 | 17 |
kidney epithelial cell | 3.08e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.