FFCP PHASE1:Hg19::chr10:54515214..54515227,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|ontology_enrichment_celltype=CL:0000763!1.50e-08!112;CL:0000049!1.50e-08!112;CL:0000451!2.74e-08!10;CL:0002009!1.06e-07!65;CL:0000557!3.37e-07!71;CL:0002194!3.39e-07!63;CL:0000576!3.39e-07!63;CL:0000040!3.39e-07!63;CL:0000559!3.39e-07!63 | |ontology_enrichment_celltype=CL:0000763!1.50e-08!112;CL:0000049!1.50e-08!112;CL:0000451!2.74e-08!10;CL:0002009!1.06e-07!65;CL:0000557!3.37e-07!71;CL:0002194!3.39e-07!63;CL:0000576!3.39e-07!63;CL:0000040!3.39e-07!63;CL:0000559!3.39e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000453;3.27e-09;5!CL:0000990;1.64e-08;8!CL:0002619;1.90e-07;3!CL:0000451;5.72e-07;10 | |ontology_enrichment_celltype_v019=CL:0000453;3.27e-09;5!CL:0000990;1.64e-08;8!CL:0002619;1.90e-07;3!CL:0000451;5.72e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000453,3.02e-09,5;CL:0000990,1.58e-08,8;CL:0002619,1.96e-07,3;CL:0000451,5.54e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.60e-07;11 | |ontology_enrichment_development_v019=UBERON:0004161;7.60e-07;11 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.22e-34!115;UBERON:0001049!2.22e-31!57;UBERON:0005068!2.22e-31!57;UBERON:0006241!2.22e-31!57;UBERON:0007135!2.22e-31!57;UBERON:0002616!1.29e-24!59;UBERON:0003080!9.04e-24!42;UBERON:0001017!1.01e-23!82;UBERON:0005743!3.66e-23!86;UBERON:0000955!9.24e-23!69;UBERON:0006238!9.24e-23!69;UBERON:0002780!1.22e-22!41;UBERON:0001890!1.22e-22!41;UBERON:0006240!1.22e-22!41;UBERON:0000073!1.02e-19!94;UBERON:0001016!1.02e-19!94;UBERON:0003075!7.66e-19!86;UBERON:0007284!7.66e-19!86;UBERON:0002346!1.84e-17!90;UBERON:0001893!1.29e-16!34;UBERON:0002020!1.38e-16!34;UBERON:0003528!1.38e-16!34;UBERON:0002791!1.08e-15!33;UBERON:0003056!1.04e-14!61;UBERON:0001869!3.42e-14!32;UBERON:0002298!1.87e-12!8;UBERON:0002390!5.60e-12!102;UBERON:0003061!5.60e-12!102;UBERON:0002619!5.96e-11!22;UBERON:0002193!1.11e-10!112;UBERON:0001950!1.58e-10!20;UBERON:0002420!2.96e-10!9;UBERON:0007245!2.96e-10!9;UBERON:0010009!2.96e-10!9;UBERON:0010011!2.96e-10!9;UBERON:0000454!2.96e-10!9;UBERON:0000153!3.34e-10!129;UBERON:0007811!3.34e-10!129;UBERON:0002308!4.77e-10!9;UBERON:0000125!4.77e-10!9;UBERON:0000033!5.81e-10!123;UBERON:0000956!3.12e-09!25;UBERON:0000203!3.12e-09!25;UBERON:0003076!1.07e-08!15;UBERON:0003057!1.07e-08!15;UBERON:0001474!2.09e-08!86;UBERON:0001894!5.47e-08!7;UBERON:0006222!5.47e-08!7;UBERON:0009663!1.30e-07!7;UBERON:0002405!1.62e-07!115;UBERON:0002371!4.08e-07!80;UBERON:0004121!7.84e-07!169;UBERON:0000178!7.94e-07!15;UBERON:0000179!7.94e-07!15;UBERON:0000463!7.94e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!6.22e-34!115;UBERON:0001049!2.22e-31!57;UBERON:0005068!2.22e-31!57;UBERON:0006241!2.22e-31!57;UBERON:0007135!2.22e-31!57;UBERON:0002616!1.29e-24!59;UBERON:0003080!9.04e-24!42;UBERON:0001017!1.01e-23!82;UBERON:0005743!3.66e-23!86;UBERON:0000955!9.24e-23!69;UBERON:0006238!9.24e-23!69;UBERON:0002780!1.22e-22!41;UBERON:0001890!1.22e-22!41;UBERON:0006240!1.22e-22!41;UBERON:0000073!1.02e-19!94;UBERON:0001016!1.02e-19!94;UBERON:0003075!7.66e-19!86;UBERON:0007284!7.66e-19!86;UBERON:0002346!1.84e-17!90;UBERON:0001893!1.29e-16!34;UBERON:0002020!1.38e-16!34;UBERON:0003528!1.38e-16!34;UBERON:0002791!1.08e-15!33;UBERON:0003056!1.04e-14!61;UBERON:0001869!3.42e-14!32;UBERON:0002298!1.87e-12!8;UBERON:0002390!5.60e-12!102;UBERON:0003061!5.60e-12!102;UBERON:0002619!5.96e-11!22;UBERON:0002193!1.11e-10!112;UBERON:0001950!1.58e-10!20;UBERON:0002420!2.96e-10!9;UBERON:0007245!2.96e-10!9;UBERON:0010009!2.96e-10!9;UBERON:0010011!2.96e-10!9;UBERON:0000454!2.96e-10!9;UBERON:0000153!3.34e-10!129;UBERON:0007811!3.34e-10!129;UBERON:0002308!4.77e-10!9;UBERON:0000125!4.77e-10!9;UBERON:0000033!5.81e-10!123;UBERON:0000956!3.12e-09!25;UBERON:0000203!3.12e-09!25;UBERON:0003076!1.07e-08!15;UBERON:0003057!1.07e-08!15;UBERON:0001474!2.09e-08!86;UBERON:0001894!5.47e-08!7;UBERON:0006222!5.47e-08!7;UBERON:0009663!1.30e-07!7;UBERON:0002405!1.62e-07!115;UBERON:0002371!4.08e-07!80;UBERON:0004121!7.84e-07!169;UBERON:0000178!7.94e-07!15;UBERON:0000179!7.94e-07!15;UBERON:0000463!7.94e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0002298;2.76e-12;6!UBERON:0002331;1.33e-07;10!UBERON:0000988;5.77e-07;3!UBERON:0001896;5.77e-07;3!UBERON:0005290;5.77e-07;3!UBERON:0000073;8.92e-07;53!UBERON:0002616;8.92e-07;53 | |ontology_enrichment_uberon_v019=UBERON:0002298;2.76e-12;6!UBERON:0002331;1.33e-07;10!UBERON:0000988;5.77e-07;3!UBERON:0001896;5.77e-07;3!UBERON:0005290;5.77e-07;3!UBERON:0000073;8.92e-07;53!UBERON:0002616;8.92e-07;53 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,3.95e-12,6;UBERON:0001049,4.59e-09,56;UBERON:0005068,4.59e-09,56;UBERON:0006241,4.59e-09,56;UBERON:0007135,4.59e-09,56;UBERON:0000073,5.27e-08,53;UBERON:0002616,5.27e-08,53;UBERON:0002331,1.16e-07,10;UBERON:0000358,1.16e-07,10;UBERON:0000307,1.16e-07,10;UBERON:0000091,1.16e-07,10;UBERON:0000087,1.16e-07,10;UBERON:0007010,1.16e-07,10;UBERON:0007806,1.16e-07,10;UBERON:0008780,1.16e-07,10;UBERON:0005728,1.16e-07,10;UBERON:0003076,2.12e-07,15;UBERON:0003057,2.12e-07,15;UBERON:0001896,6.52e-07,3;UBERON:0005290,6.52e-07,3;UBERON:0010096,6.52e-07,3;UBERON:0000988,7.36e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05520307534393,0,0,0,3.13481663935894,0.971680998056939,3.8636335145128,0,0,0,0,0,0.309706370895104,0.863077176966451,0.512321413058201,0.47296445977717,0,2.5819387343353,0,0,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0.398927315243264,0,0,0,0.622822248995575,0.251248665256743,0,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,1.43094374583205,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,0,1.18904929830983,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0.640986253728404,1.48517099857058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,1.7235483311913,0,0,0,2.28234679033192,0,5.01268954180134,0,0.642352300414798,0,2.12923118845163,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,1.1253553312841,0,0.494411622680279,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.60298219312704,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,2.5116841023204,1.32969345520125,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,3.55825354416746,2.71840665682306,1.8795950910982,2.3590396543237,0,0.937057782901357,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0.577901179803038,0.600420288709789,3.42263447229983,0,0,0,0,0,0,0,0,0,0,0,0,2.44227865152393,2.80213918495966,2.56133466645903,0,0,0,0.953423842781029,0,0,0,5.62434728878751,0,0.425246896606173,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,1.32506888912221,0.258565912723101,2.38018683136842,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.876336514945499,0.573409195690071,2.44043913381075,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,5.65094895634227,0.797189041880179,1.63565394255844,0,0,0,1.9998739585493,0.853533837553127,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,1.91560630868582,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,14.3219679923718,0,0,0,0,0,0,0.337687923091973,0,0.826747186004736,0.19024743058172,0,0,0,0,0,0,1.00885116665647,0.606965604236632,0.455324382702595,0.177404740325278,0.345701962667338,0,1.08751572762931,0.460409414939944,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,4.45569600490629,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,4.44352707769499,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,2.58582489654738,0,0,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0,0,0.26940821205835,0.215166616178029,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05520307534393,0,0,0,3.13481663935894,0.971680998056939,3.8636335145128,0,0,0,0,0,0.309706370895104,0.863077176966451,0.512321413058201,0.47296445977717,0,2.5819387343353,0,0,0.272906150057846,0.224723484445085,0,0,0,0.329851300186716,0.398927315243264,0,0,0,0.622822248995575,0.251248665256743,0,0.65156653411535,0.605399502633369,0.736555271975129,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.96513985737078,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,1.43094374583205,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.67812311566055,0,1.18904929830983,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670065061337395,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75169719801128,0.640986253728404,1.48517099857058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88287601553558,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,1.7235483311913,0,0,0,2.28234679033192,0,5.01268954180134,0,0.642352300414798,0,2.12923118845163,0.343505344755765,0,0.223676107892416,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0.994147647766298,1.1253553312841,0,0.494411622680279,0,0.996239941255349,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.60298219312704,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,2.5116841023204,1.32969345520125,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,3.55825354416746,2.71840665682306,1.8795950910982,2.3590396543237,0,0.937057782901357,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.443175571691151,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0,0.135904206073614,0,0,0.577901179803038,0.600420288709789,3.42263447229983,0,0,0,0,0,0,0,0,0,0,0,0,2.44227865152393,2.80213918495966,2.56133466645903,0,0,0,0.953423842781029,0,0,0,5.62434728878751,0,0.425246896606173,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,1.32506888912221,0.258565912723101,2.38018683136842,0,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.876336514945499,0.573409195690071,2.44043913381075,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,5.65094895634227,0.797189041880179,1.63565394255844,0,0,0,1.9998739585493,0.853533837553127,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,1.91560630868582,0,0.252071696221718,0.207471757392654,0,0,0,0,0,0,0,0,14.3219679923718,0,0,0,0,0,0,0.337687923091973,0,0.826747186004736,0.19024743058172,0,0,0,0,0,0,1.00885116665647,0.606965604236632,0.455324382702595,0.177404740325278,0.345701962667338,0,1.08751572762931,0.460409414939944,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0.196308467114945,4.45569600490629,0.8453114551668,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,4.44352707769499,0,0.407948941145488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,2.58582489654738,0,0,0.129177819672012,0.124149428591716,0,0.0636471582781649,0,0,0,0.26940821205835,0.215166616178029,0,0,0,0,0,2.34640942403454,0,0,0,0,0 | ||
|short_description=p2@ENST00000443523 | |short_description=p2@ENST00000443523 | ||
}} | }} |
Revision as of 23:49, 17 November 2012
Short description: | p2@ENST00000443523 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000443523_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000443523_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.02e-09 | 5 |
conventional dendritic cell | 1.58e-08 | 8 |
adult endothelial progenitor cell | 1.96e-07 | 3 |
dendritic cell | 5.54e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
brainstem | 3.95e-12 | 6 |
neural tube | 4.59e-09 | 56 |
neural rod | 4.59e-09 | 56 |
future spinal cord | 4.59e-09 | 56 |
neural keel | 4.59e-09 | 56 |
regional part of nervous system | 5.27e-08 | 53 |
regional part of brain | 5.27e-08 | 53 |
umbilical cord | 1.16e-07 | 10 |
blastocyst | 1.16e-07 | 10 |
blastula | 1.16e-07 | 10 |
bilaminar disc | 1.16e-07 | 10 |
inner cell mass | 1.16e-07 | 10 |
cleaving embryo | 1.16e-07 | 10 |
connecting stalk | 1.16e-07 | 10 |
inner cell mass derived epiblast | 1.16e-07 | 10 |
extraembryonic mesoderm | 1.16e-07 | 10 |
posterior neural tube | 2.12e-07 | 15 |
chordal neural plate | 2.12e-07 | 15 |
medulla oblongata | 6.52e-07 | 3 |
myelencephalon | 6.52e-07 | 3 |
future myelencephalon | 6.52e-07 | 3 |
pons | 7.36e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.