FFCP PHASE1:Hg19::chr12:125399493..125399504,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7316|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12468|TSSclassifier=S|UniProt=F5H041|association_with_transcript=-15bp_to_ENST00000541046_5end|coexpression_cluster_id=C1|description=CAGE_peak_17_at_UBC_5end|id=chr12:125399493..125399504,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002363;2.74e-12;2!CL:0002593;2.74e-12;2!CL:0000746;9.66e-09;3!CL:0000737;7.27e-07;4!CL:0000244;8.85e-07;4!CL:0000731;8.85e-07;4|ontology_enrichment_celltype_v019_2=CL:0002593,3.24e-12,2;CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2;CL:0000746,9.66e-09,3;CL:0000513,9.66e-09,3;CL:0000737,7.27e-07,4;CL:0000244,7.70e-07,4;CL:0000731,7.70e-07,4|ontology_enrichment_development_v019=CL:0000008;2.74e-12;2!UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!CL:0000513;9.66e-09;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0003566;2.74e-12;2!UBERON:0001777;2.74e-12;2!UBERON:0002456;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0003891;8.85e-07;4!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.24e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0003135,4.08e-09,11|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0.436882744260345,0,0,0,0,0.602694528023977,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0.6024118375565,0,0.0774672005803016,0.284338464974843,0,0.553995408531877,0,0,0,0,0.257575567634187,0.145398238779565,0,0,0,0,0.309706370895104,0.28769239232215,0,0,0,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0.251248665256743,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.916853528483988,0,0,0,0.174129737299267,0,0,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.336672227908132,0,0,0,0,0,0.226864366320042,0.358779271377724,0.213557388818567,0,0,0.515262646192195,0,0,0.337552664482532,0,0,0,0,0,0,0.339121184620975,0,0.272746120590835,0.286804595389004,0.243947412259191,0.397589304964456,0.580969714347592,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0,0,0,0,0.237270619111097,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0.245976877086227,0.171567810298526,0,0,0,0.0925884451585296,0,1.03993478527958,0,0,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0,0,0,0.30239029332968,0,0,0.561320188866147,0.256278298511402,0.511707249066704,0,0,0,0,0.164254312027618,0,0,0,0.200506470303285,0,0.114814448164607,0.182091168006717,0,0.451199612907412,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0.650756789328606,0,0,0.165018999841176,0,0,0,0.290012154876366,0.308097234229289,0,0,0.107420244868274,0,0.0852266274161009,0.178064071293475,0,0.192190067365106,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0.572499546967965,0,0,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0.202182481573316,0,0,0,0,1.05650146756755,0.272999822815972,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.188287601553558,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0.318852545457645,0.199579371432817,0,0,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0,0,0.447352215784832,0,0,0,0,0.270455678475983,0.33307196799782,0,0,0,0.242721043499027,0.222886768554957,0,0,0,0.307160702099232,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.227586896570999,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0,0.295547618953547,0.219385397153973,0,0.278847488557207,0,0.569710279235006,0,0.179515288819544,0,0,0.0915975934018623,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0.163232808159148,0.565412285735763,0,0,0.0884575645033392,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7316 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12468 | |||
|TSSclassifier=S | |||
|UniProt=F5H041 | |||
|association_with_transcript=-15bp_to_ENST00000541046_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_17_at_UBC_5end | |||
|id=chr12:125399493..125399504,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002363;2.74e-12;2!CL:0002593;2.74e-12;2!CL:0000746;9.66e-09;3!CL:0000737;7.27e-07;4!CL:0000244;8.85e-07;4!CL:0000731;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,3.24e-12,2;CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2;CL:0000746,9.66e-09,3;CL:0000513,9.66e-09,3;CL:0000737,7.27e-07,4;CL:0000244,7.70e-07,4;CL:0000731,7.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000008;2.74e-12;2!UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!CL:0000513;9.66e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;2.74e-12;2!UBERON:0001777;2.74e-12;2!UBERON:0002456;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0003135;4.08e-09;11!UBERON:0003891;8.85e-07;4!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002456,3.24e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0003135,4.08e-09,11 | |||
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| |||
|short_description=p17@UBC | |||
}} |
Revision as of 21:37, 10 September 2013
Short description: | p17@UBC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_UBC_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -15bp_to_ENST00000541046_5end |
EntrezGene: | UBC |
HGNC: | 12468 |
UniProt: | F5H041 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 3.24e-12 | 2 |
keratocyte | 3.62e-12 | 2 |
migratory cranial neural crest cell | 3.62e-12 | 2 |
cardiac muscle cell | 9.66e-09 | 3 |
cardiac muscle myoblast | 9.66e-09 | 3 |
striated muscle cell | 7.27e-07 | 4 |
transitional epithelial cell | 7.70e-07 | 4 |
urothelial cell | 7.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
internal thoracic artery | 3.24e-12 | 2 |
testis | 3.54e-12 | 8 |
head connective tissue | 3.62e-12 | 2 |
substantia propria of cornea | 3.62e-12 | 2 |
male reproductive organ | 4.08e-09 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.