FFCP PHASE1:Hg19::chr14:78083149..78083160,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9517|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11278|TSSclassifier=S|UniProt=O15270|association_with_transcript=-33bp_to_ENST00000216484_5end|description=CAGE_peak_4_at_SPTLC2_5end|id=chr14:78083149..78083160,-|ontology_enrichment_celltype=CL:0000037!2.88e-09!172;CL:0000566!2.88e-09!172;CL:0000791!7.79e-08!18;CL:0000789!7.79e-08!18;CL:0002420!7.79e-08!18;CL:0002419!7.79e-08!18;CL:0000790!7.79e-08!18;CL:0002032!8.71e-08!165;CL:0000837!8.71e-08!165;CL:0000988!1.94e-07!182;CL:0000738!9.28e-07!140|ontology_enrichment_celltype_v019=CL:0000039;3.24e-08;7!CL:0000586;3.24e-08;7|ontology_enrichment_celltype_v019_2=CL:0000039,2.30e-08,7;CL:0000586,2.30e-08,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.96e-17!115;UBERON:0001049!5.31e-12!57;UBERON:0005068!5.31e-12!57;UBERON:0006241!5.31e-12!57;UBERON:0007135!5.31e-12!57;UBERON:0003080!1.18e-10!42;UBERON:0002780!2.04e-10!41;UBERON:0001890!2.04e-10!41;UBERON:0006240!2.04e-10!41;UBERON:0002616!3.04e-09!59;UBERON:0002020!1.05e-08!34;UBERON:0003528!1.05e-08!34;UBERON:0001893!1.70e-08!34;UBERON:0002791!2.72e-08!33;UBERON:0000955!4.41e-08!69;UBERON:0006238!4.41e-08!69;UBERON:0003075!6.73e-08!86;UBERON:0007284!6.73e-08!86;UBERON:0000073!9.61e-08!94;UBERON:0001016!9.61e-08!94;UBERON:0002346!1.13e-07!90;UBERON:0001869!1.32e-07!32;UBERON:0005743!2.32e-07!86;UBERON:0001017!8.69e-07!82|ontology_enrichment_uberon_v019=UBERON:0000125;8.26e-10;9!UBERON:0002308;8.26e-10;9!UBERON:0002420;1.55e-07;9!UBERON:0007245;1.55e-07;9!UBERON:0010009;1.55e-07;9!UBERON:0010011;1.55e-07;9!UBERON:0000454;1.55e-07;9!UBERON:0009663;1.88e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.51e-11,114;UBERON:0000125,8.29e-11,9;UBERON:0002308,8.29e-11,9;UBERON:0001049,2.07e-10,56;UBERON:0005068,2.07e-10,56;UBERON:0006241,2.07e-10,56;UBERON:0007135,2.07e-10,56;UBERON:0002420,1.52e-08,9;UBERON:0007245,1.52e-08,9;UBERON:0010009,1.52e-08,9;UBERON:0010011,1.52e-08,9;UBERON:0000454,1.52e-08,9;UBERON:0009663,2.81e-08,7;UBERON:0000073,3.15e-08,53;UBERON:0002616,3.15e-08,53;UBERON:0002780,1.23e-07,41;UBERON:0001890,1.23e-07,41;UBERON:0003080,1.23e-07,41;UBERON:0006240,1.23e-07,41;UBERON:0003528,2.17e-07,34;UBERON:0002020,2.17e-07,34;UBERON:0000369,2.92e-07,4;UBERON:0002435,2.92e-07,4;UBERON:0000204,2.92e-07,4;UBERON:0010082,2.92e-07,4|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.436882744260345,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0.305653622991805,0.246301768349837,0.157421562627358,1.96682138424452,0,0.464448369948228,0,0,0,0.774672005803016,0,0.880801318004542,0,0.802177789880567,0.434021741431704,1.56740831967947,1.29557466407592,0.77272670290256,0.145398238779565,1.13362783106643,0.485168122375632,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0.612167784741805,0,0.639337125799041,0.989553900560148,0.398927315243264,0,0,0,0,0.251248665256743,1.0429658368404,0.434377689410233,1.21079900526674,0.368277635987565,0,0.633765858935825,0.637812899895131,0.628975936525128,0.786300418025466,0.300353785683013,1.92870704036496,0,0.59675003159727,0.365328307529268,3.51992488922645,1.09227722252426,0.889509253863555,0.853460445133014,1.20118796110804,0.574752439954483,1.98313461835459,1.90810750907073,0,0,1.91136614062614,3.96513985737078,1.12101712596307,0.790152254325231,0.393419540227666,1.17903228824749,0.616804496998528,0.501559486172034,0.32592226663359,1.89379122293893,0,1.22551502573691,1.17842362989935,1.32920336750173,0,1.15282187753108,1.04047478047903,0.822189523018381,1.38175008892924,1.44901542867526,1.03800594213442,0,0,1.0197840842781,1.53288197440768,2.40539211837841,1.77113784413652,0.637130828648193,2.60433381542567,1.90090408889675,0.903450714466637,1.27986611154418,2.49861453104692,1.65744076430812,2.46338399076314,0.80642697289893,0.802320587350522,0.868946423296794,0,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.72038491523742,0,0,0.649094787309367,0.174129737299267,0,0.715471872916026,1.71598473234038,1.11437250398869,0.79504962946682,0,0,1.13061588384802,0,0.275118041940067,0.208994966536811,0.775250277507987,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0,0,0.803697554556718,1.12264686313085,1.0135033243499,0,0.949265659568129,0.183201743930407,0,0,0,0,0.379891534993739,0.132409180813219,0.573673241497627,0,0,1.06748995729705,0,0,0.269421344139376,0,0.454072282934794,0,0.468642863667593,0,0,0,0.469737994575059,0.323745888736263,0.561803226808994,0.204154171254893,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9517 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11278 | |||
|TSSclassifier=S | |||
|UniProt=O15270 | |||
|association_with_transcript=-33bp_to_ENST00000216484_5end | |||
|description=CAGE_peak_4_at_SPTLC2_5end | |||
|id=chr14:78083149..78083160,- | |||
|ontology_enrichment_celltype=CL:0000037!2.88e-09!172;CL:0000566!2.88e-09!172;CL:0000791!7.79e-08!18;CL:0000789!7.79e-08!18;CL:0002420!7.79e-08!18;CL:0002419!7.79e-08!18;CL:0000790!7.79e-08!18;CL:0002032!8.71e-08!165;CL:0000837!8.71e-08!165;CL:0000988!1.94e-07!182;CL:0000738!9.28e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.24e-08;7!CL:0000586;3.24e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.30e-08,7;CL:0000586,2.30e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.96e-17!115;UBERON:0001049!5.31e-12!57;UBERON:0005068!5.31e-12!57;UBERON:0006241!5.31e-12!57;UBERON:0007135!5.31e-12!57;UBERON:0003080!1.18e-10!42;UBERON:0002780!2.04e-10!41;UBERON:0001890!2.04e-10!41;UBERON:0006240!2.04e-10!41;UBERON:0002616!3.04e-09!59;UBERON:0002020!1.05e-08!34;UBERON:0003528!1.05e-08!34;UBERON:0001893!1.70e-08!34;UBERON:0002791!2.72e-08!33;UBERON:0000955!4.41e-08!69;UBERON:0006238!4.41e-08!69;UBERON:0003075!6.73e-08!86;UBERON:0007284!6.73e-08!86;UBERON:0000073!9.61e-08!94;UBERON:0001016!9.61e-08!94;UBERON:0002346!1.13e-07!90;UBERON:0001869!1.32e-07!32;UBERON:0005743!2.32e-07!86;UBERON:0001017!8.69e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;8.26e-10;9!UBERON:0002308;8.26e-10;9!UBERON:0002420;1.55e-07;9!UBERON:0007245;1.55e-07;9!UBERON:0010009;1.55e-07;9!UBERON:0010011;1.55e-07;9!UBERON:0000454;1.55e-07;9!UBERON:0009663;1.88e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.51e-11,114;UBERON:0000125,8.29e-11,9;UBERON:0002308,8.29e-11,9;UBERON:0001049,2.07e-10,56;UBERON:0005068,2.07e-10,56;UBERON:0006241,2.07e-10,56;UBERON:0007135,2.07e-10,56;UBERON:0002420,1.52e-08,9;UBERON:0007245,1.52e-08,9;UBERON:0010009,1.52e-08,9;UBERON:0010011,1.52e-08,9;UBERON:0000454,1.52e-08,9;UBERON:0009663,2.81e-08,7;UBERON:0000073,3.15e-08,53;UBERON:0002616,3.15e-08,53;UBERON:0002780,1.23e-07,41;UBERON:0001890,1.23e-07,41;UBERON:0003080,1.23e-07,41;UBERON:0006240,1.23e-07,41;UBERON:0003528,2.17e-07,34;UBERON:0002020,2.17e-07,34;UBERON:0000369,2.92e-07,4;UBERON:0002435,2.92e-07,4;UBERON:0000204,2.92e-07,4;UBERON:0010082,2.92e-07,4 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0.436882744260345,0,0,0.331397375727916,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0.410623275218653,0.125542639594803,0.305653622991805,0.246301768349837,0.157421562627358,1.96682138424452,0,0.464448369948228,0,0,0,0.774672005803016,0,0.880801318004542,0,0.802177789880567,0.434021741431704,1.56740831967947,1.29557466407592,0.77272670290256,0.145398238779565,1.13362783106643,0.485168122375632,0.232429036905685,0,0,0.575384784644301,0.256160706529101,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0.545812300115692,0.224723484445085,0.612167784741805,0,0.639337125799041,0.989553900560148,0.398927315243264,0,0,0,0,0.251248665256743,1.0429658368404,0.434377689410233,1.21079900526674,0.368277635987565,0,0.633765858935825,0.637812899895131,0.628975936525128,0.786300418025466,0.300353785683013,1.92870704036496,0,0.59675003159727,0.365328307529268,3.51992488922645,1.09227722252426,0.889509253863555,0.853460445133014,1.20118796110804,0.574752439954483,1.98313461835459,1.90810750907073,0,0,1.91136614062614,3.96513985737078,1.12101712596307,0.790152254325231,0.393419540227666,1.17903228824749,0.616804496998528,0.501559486172034,0.32592226663359,1.89379122293893,0,1.22551502573691,1.17842362989935,1.32920336750173,0,1.15282187753108,1.04047478047903,0.822189523018381,1.38175008892924,1.44901542867526,1.03800594213442,0,0,1.0197840842781,1.53288197440768,2.40539211837841,1.77113784413652,0.637130828648193,2.60433381542567,1.90090408889675,0.903450714466637,1.27986611154418,2.49861453104692,1.65744076430812,2.46338399076314,0.80642697289893,0.802320587350522,0.868946423296794,0,0,0.255725123687061,0.361439152384566,0,0.434539556882471,0,0,0.378139268656271,0.221729397462564,0.263504357079378,0.72038491523742,0,0,0.649094787309367,0.174129737299267,0,0.715471872916026,1.71598473234038,1.11437250398869,0.79504962946682,0,0,1.13061588384802,0,0.275118041940067,0.208994966536811,0.775250277507987,1.06729878806013,0.33472061276467,0,0,0.24406205754817,0,0,0.803697554556718,1.12264686313085,1.0135033243499,0,0.949265659568129,0.183201743930407,0,0,0,0,0.379891534993739,0.132409180813219,0.573673241497627,0,0,1.06748995729705,0,0,0.269421344139376,0,0.454072282934794,0,0.468642863667593,0,0,0,0.469737994575059,0.323745888736263,0.561803226808994,0.204154171254893,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.438977620880838,0,0.300476117813194,0.113432183160021,0.717558542755448,0,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,0.37223371266318,0,0.194874010322397,0,0.184099797284599,0,0,0.10075209822764,0.339121184620975,0.386521706326594,0,0,0.243947412259191,0.662648841607426,0.464775771478074,0.621966330092223,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0.171567810298526,0.219500570817251,0,0.201057944823262,0.277765335475589,0,0,0,0.34779121492523,0.117408694235822,0,0.462985512576611,0.570762456703795,0,0,0.738651018262192,0.234004265139238,1.0404181360211,0,0,0.141775097242386,0.0895585227028483,0,0,1.47798971368783,0.792435906119034,0.829312462163088,0.576479813667846,0.12624243342638,0.190493682876507,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.51336800074665,0.387815147273333,3.57656445851882,0,0,2.08014873822732,0,0,0.266422179016099,0,0,0,0.977208552881205,0,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,0.718874566474748,0,0,0,0.821905290201534,0.179060963239896,0.896681151948218,0.394061520403854,0.862510299438069,1.15508732651774,0,0,0,0,0,0.749007023947182,0,0.828831026872071,0.36807447515742,1.00034104211935,0.542530047399471,0,0.356857977594324,0.157702415033935,0.585707074963566,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,1.44737618286021,0.431428401637234,1.28073069364133,0.303127571446259,0,0.30239029332968,0.496215615637554,0,0.280660094433074,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,0.241718899183244,0,0.644566922551274,0.114814448164607,0,0,0.451199612907412,0.385076685522074,0,0,1.05551628892876,1.13733384070897,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0.438519753291869,1.3071772551245,0.512900250232778,0.656029291399411,0.650756789328606,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.15350367472613,0.275673144969061,0,0.145016693914229,0.340906509664404,0.0890320356467374,0.165284915360978,0.576570202095319,0.893288987462089,0.50578890427775,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.316379424718726,0.190630193923825,0.255897791311334,0.855877976067841,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0.974853958525138,1.05650146756755,0.136499911407986,0.2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| |||
|short_description=p4@SPTLC2 | |||
}} |
Revision as of 05:42, 11 September 2013
Short description: | p4@SPTLC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SPTLC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -33bp_to_ENST00000216484_5end |
EntrezGene: | SPTLC2 |
HGNC: | 11278 |
UniProt: | O15270 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.30e-08 | 7 |
germ cell | 2.30e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.51e-11 | 114 |
neural nucleus | 8.29e-11 | 9 |
nucleus of brain | 8.29e-11 | 9 |
neural tube | 2.07e-10 | 56 |
neural rod | 2.07e-10 | 56 |
future spinal cord | 2.07e-10 | 56 |
neural keel | 2.07e-10 | 56 |
basal ganglion | 1.52e-08 | 9 |
nuclear complex of neuraxis | 1.52e-08 | 9 |
aggregate regional part of brain | 1.52e-08 | 9 |
collection of basal ganglia | 1.52e-08 | 9 |
cerebral subcortex | 1.52e-08 | 9 |
telencephalic nucleus | 2.81e-08 | 7 |
regional part of nervous system | 3.15e-08 | 53 |
regional part of brain | 3.15e-08 | 53 |
regional part of forebrain | 1.23e-07 | 41 |
forebrain | 1.23e-07 | 41 |
anterior neural tube | 1.23e-07 | 41 |
future forebrain | 1.23e-07 | 41 |
brain grey matter | 2.17e-07 | 34 |
gray matter | 2.17e-07 | 34 |
corpus striatum | 2.92e-07 | 4 |
striatum | 2.92e-07 | 4 |
ventral part of telencephalon | 2.92e-07 | 4 |
future corpus striatum | 2.92e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.