FFCP PHASE1:Hg19::chr15:71146436..71146447,-: Difference between revisions
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{{FFCP | 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254253650292766,0,0.344743373241465,0,0.520874984799877,0,1.5677537021303,0,0.774054819518572,4.43321428430321,1.31631238292384,0.653630781113941,2.50962739701486,0.384751292518985,4.89950840142105,0,0,0.325942115766024,0,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0.848118428603645,0.216388639742091,0,0.265372693510018,0,4.44781693020933,2.22415090103705,1.67075119208729,15.5022605855557,0.802577647298789,9.37057782901357,0,1.36965233252463,3.15614493394321,0.394584402849391,0,0,1.01098527405581,3.60776206594782,1.7626992537532,4.6525771089503,1.98595173525299,4.08112793929393,3.58417289318877,2.56148591426813,5.40831224751241,1.73559738335131,0.195984794828755,1.04471047896483,0.34945333648406,0.687944129886466,0.580537987734511,0.438535902517113,0.328461828212837,0.484945082442097,0.0882561266915003,1.12990370390266,3.01492234222852,0.794858446811959,6.58432277941138,0.391102765469606,0.160317640503067,0.640358984218058,0.39961921916426,1.58499458869517,1.03082936549324,0,1.87271237384595,1.73953549791606,0.707082103850386,1.76675467895698,1.882851233622,3.2639429643623,2.88950589901519,1.20084057741958,4.51787750343577,0,2.57859264851974,0,1.39641200636127,1.14580212005842,0,1.79711100449092,1.28767814440971,3.57074331906996,1.67958681216816,2.88239906833923,0,0.157566364614447,0.164831716762333,0.202210631562555,8.36633592875365,0.677386656526276,0.795229689809303,2.45166131000836,0.643012593860077,0.275078873194468,0,0,0,4.6777158626679,0.335434687599266,1.02447419488958,0.419636705079985,0.844802692155252,0.35857467866569,2.49489756515279,0.714695326373367,2.64836788146173,7.88232466729724,9.77399283156683,6.04955043840887,2.28611152076586,0,0.656740165994712,1.70388021785422,2.37955392192264,0.293104467356165,0,3.23207390903876,2.6446520348538,3.07956308191793,0,0.320362237703084,0.314408610199332,0,0,0,0,2.55336503108073,3.26410682021684,7.520696820681,2.75711019087115,4.26234419922746,1.72759505875258,0.886068179966986,0.854183854313742,3.3801551290755,1.14681839138014,2.66229723688445,9.56284605297305,0.830091809617385,0.249960815924213,0.303298235083296,0.570930667089935,3.05845565607623,0.468334905806882,0.144921028610825,3.73137007217185,3.97312626740282,11.6509230915549,4.54567212660214,5.78606174030923,2.66943366478961,16.2476448561816,10.4349337396635,6.372925223894,3.99208904972012,3.34523211043775,9.4458653554357,2.79473322377267,4.97647449409027,3.98762571836992,4.17396049449387,2.55437935295271,8.75851987988229,2.44122439922797,2.00033525122815,4.83347506691198,1.85613503951397,5.57334244178062,0.400027764663154,4.46414416737631,5.38799182025471,17.6658857520111,4.04501643855337,0,8.87380592681719,0.906823702049089,1.15761237161917,2.93684045407761,1.4327107286519,0,0.877136198314828,2.8270263351341,4.43702288023104,0.506827321959218,0.256241518587947,0.345430341731199,1.51929978088691,3.04168559533808,0,0,0,1.31043939538565,0.491545817507439,3.80361822045529,0,0,0,5.10764358210152,2.02516545277025,1.258915569475,1.86623178009892,1.27894371303652,0.754773679776773,2.35898912783845,0,0.33946505990805,0,3.09839410647505,0,6.67809136372179,0,0.80057074828547,1.76337971845342,0.918736432059601,5.0741087826203,1.41696576325585,2.87340946302872,5.74325819874114,0.252071696221718,9.12875732527676,2.26065903884592,12.8492478233239,1.96295437002051,0.471878893390961,0.183428598521679,0.577628330751691,4.57658514560601,2.7614397042404,4.77398933079059,0.451261970095544,0.60511520611056,0,0,1.96526301012116,0.887136517302272,7.09144638493144,3.12431239445539,2.68692835451539,5.77083872764552,0.546974809018219,0.548257766857182,0.992422356778588,0.879356221798103,2.55524855279191,0,0,0.606965604236632,0.227662191351298,0.266107110487916,0.115233987555779,1.20041606606193,7.61261009340515,7.30077786547625,0.236387681767936,1.55723962648897,0.235479278551542,0.785577949580009,1.40136081656895,0,1.94334832096759,0,0.857718530119876,0.158013611732727,0,0.521574816907738,1.60342272946051,0.828864656652147,0.17071847709395,0,0,3.4316280211864,4.26067023795788,0.423387050190929,1.3746412112643,0.93061915699296,0,0.559277158988962,0,0,0.647428837187895,0.205325613712494,0,0.485710993059139,0.935757853848423,0.795803100645473,0.356760272332706,0.79062257427272,0,2.8682940277668,0.0771741581079447,0.218559560503957,0.470317296361523,0.490296643507811,0.235676547101626,2.1593931382644,2.67341760294377,5.9171801861676,3.56846940844415,0.0939839179798536,0.193373663920732,0,0.535661815816973,3.52894871715692,3.45037876763424,0,0,5.16022499345225,0.315543124386369,8.49893627386434,1.30905207102113,0,1.11598505450025,1.38652688589425,1.73050624849516,1.13549782351571,0.764859003745869,0.126698501011437,4.89546382761512,1.60330443159336,3.6757959813938,0.250707539292375,0.227336094654718,0.535928260312357,5.80418607621146,5.17164979309476,0,0.23806443146374,0.129177819672012,0.186224142887574,2.35476911419288,2.73682780596109,0.606351566874658,0.435433495793923,0.342233301085281,0.0673520530145875,0.573777643141411,0.332660356546013,1.38385556638657,3.20182037633146,1.9307228228694,2.24563005266467,0,0.488965776731466,0,1.99727032255654,0.603821380773079,0.320568492303233|short_description=p3@LARP6}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24012 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=18bp_to_ENST00000559140_5end | |||
|coexpression_cluster_id=C3509 | |||
|description=CAGE_peak_3_at_LARP6_5end | |||
|id=chr15:71146436..71146447,- | |||
|ontology_enrichment_celltype=CL:0000055!2.04e-29!180;CL:0000192!2.69e-15!42;CL:0000514!2.69e-15!42;CL:0000680!2.81e-15!57;CL:0000056!2.81e-15!57;CL:0000355!2.81e-15!57;CL:0000183!4.40e-15!59;CL:0000359!9.70e-15!32;CL:0000187!2.42e-14!54;CL:0000057!3.38e-13!75;CL:0000393!2.07e-12!60;CL:0000211!2.07e-12!60;CL:0000222!4.98e-08!119;CL:0002321!7.38e-07!248;CL:0000220!7.55e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.52e-15;32!CL:0000192;6.64e-12;43!CL:0000187;1.83e-07;55!CL:0002539;3.14e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.64e-16,32;CL:0000192,9.08e-16,43;CL:0000514,9.08e-16,43;CL:0000680,6.44e-15,58;CL:0000056,6.44e-15,58;CL:0000355,6.44e-15,58;CL:0000187,7.72e-14,55;CL:0000057,5.90e-12,76;CL:0000393,8.08e-11,61;CL:0000211,8.08e-11,61;CL:0002539,3.61e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;6.64e-12;43!CL:0000355;2.00e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.38e-18!365;UBERON:0000914!2.14e-14!83;UBERON:0002329!2.14e-14!83;UBERON:0003077!2.14e-14!83;UBERON:0003059!2.14e-14!83;UBERON:0007282!2.14e-14!83;UBERON:0009618!2.14e-14!83;UBERON:0007285!2.14e-14!83;UBERON:0001134!8.80e-14!61;UBERON:0002036!8.80e-14!61;UBERON:0003082!8.80e-14!61;UBERON:0002385!4.02e-13!63;UBERON:0001015!4.02e-13!63;UBERON:0000383!4.02e-13!63;UBERON:0000119!5.75e-13!312;UBERON:0004290!1.05e-12!70;UBERON:0000481!1.45e-12!347;UBERON:0000483!2.76e-12!309;UBERON:0001637!4.10e-12!42;UBERON:0003509!4.10e-12!42;UBERON:0004572!4.10e-12!42;UBERON:0000486!1.09e-11!82;UBERON:0000477!1.63e-11!286;UBERON:0004573!7.98e-11!33;UBERON:0004571!7.98e-11!33;UBERON:0004111!1.63e-10!241;UBERON:0000025!2.07e-10!194;UBERON:0000468!3.89e-10!659;UBERON:0000073!1.86e-09!94;UBERON:0001016!1.86e-09!94;UBERON:0002049!2.91e-09!79;UBERON:0007798!2.91e-09!79;UBERON:0000033!3.12e-09!123;UBERON:0004872!4.74e-09!84;UBERON:0000955!7.05e-09!69;UBERON:0006238!7.05e-09!69;UBERON:0000467!8.85e-09!625;UBERON:0005743!9.43e-09!86;UBERON:0002100!1.21e-08!216;UBERON:0000480!1.41e-08!626;UBERON:0001009!3.14e-08!113;UBERON:0001017!4.10e-08!82;UBERON:0001981!4.21e-08!60;UBERON:0007500!4.21e-08!60;UBERON:0004537!4.21e-08!60;UBERON:0006965!4.21e-08!60;UBERON:0002616!5.56e-08!59;UBERON:0004535!8.13e-08!110;UBERON:0001049!8.60e-08!57;UBERON:0005068!8.60e-08!57;UBERON:0006241!8.60e-08!57;UBERON:0007135!8.60e-08!57;UBERON:0000153!8.99e-08!129;UBERON:0007811!8.99e-08!129;UBERON:0000055!1.46e-07!69;UBERON:0003075!1.78e-07!86;UBERON:0007284!1.78e-07!86;UBERON:0002346!3.45e-07!90;UBERON:0005256!3.93e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.41e-10;33!UBERON:0004571;3.41e-10;33!UBERON:0001637;6.22e-08;42!UBERON:0003509;6.22e-08;42!UBERON:0004572;6.22e-08;42!UBERON:0004237;3.14e-07;10!UBERON:0004695;3.14e-07;10!UBERON:0002111;3.14e-07;10!UBERON:0004178;3.14e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,9.11e-13,62;UBERON:0002036,9.11e-13,62;UBERON:0003082,9.11e-13,62;UBERON:0002385,8.16e-12,64;UBERON:0001015,8.16e-12,64;UBERON:0000383,8.16e-12,64;UBERON:0001637,1.08e-11,42;UBERON:0003509,1.08e-11,42;UBERON:0004572,1.08e-11,42;UBERON:0007524,1.38e-11,73;UBERON:0003077,1.90e-11,72;UBERON:0007285,1.90e-11,72;UBERON:0004573,2.45e-11,33;UBERON:0004571,2.45e-11,33;UBERON:0002329,3.05e-11,71;UBERON:0003059,3.05e-11,71;UBERON:0007282,3.05e-11,71;UBERON:0004290,3.05e-11,71;UBERON:0009618,3.05e-11,71;UBERON:0010314,9.65e-11,132;UBERON:0007503,1.37e-09,78;UBERON:0000486,5.14e-09,83;UBERON:0000955,6.19e-08,68;UBERON:0006238,6.19e-08,68;UBERON:0000025,8.18e-08,192;UBERON:0004872,1.64e-07,83;UBERON:0001016,2.36e-07,89;UBERON:0001049,3.58e-07,56;UBERON:0005068,3.58e-07,56;UBERON:0006241,3.58e-07,56;UBERON:0007135,3.58e-07,56;UBERON:0004237,3.61e-07,10;UBERON:0004695,3.61e-07,10;UBERON:0002111,3.61e-07,10;UBERON:0004178,3.61e-07,10;UBERON:0001009,5.71e-07,112;UBERON:0003075,7.50e-07,82;UBERON:0007284,7.50e-07,82 | |||
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| |||
|short_description=p3@LARP6 | |||
}} |
Revision as of 08:05, 11 September 2013
Short description: | p3@LARP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LARP6_5end |
Coexpression cluster: | C3509_Fibroblast_Keratocytes_Myoblast_tridermal_Smooth_optic_embryonic |
Association with transcript: | 18bp_to_ENST00000559140_5end |
EntrezGene: | LARP6 |
HGNC: | 24012 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.64e-16 | 32 |
smooth muscle cell | 9.08e-16 | 43 |
smooth muscle myoblast | 9.08e-16 | 43 |
muscle precursor cell | 6.44e-15 | 58 |
myoblast | 6.44e-15 | 58 |
multi-potent skeletal muscle stem cell | 6.44e-15 | 58 |
muscle cell | 7.72e-14 | 55 |
fibroblast | 5.90e-12 | 76 |
electrically responsive cell | 8.08e-11 | 61 |
electrically active cell | 8.08e-11 | 61 |
aortic smooth muscle cell | 3.61e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.