FFCP PHASE1:Hg19::chr17:48351809..48351870,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=162461|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26579|TSSclassifier=S|UniProt=Q6UXU6|association_with_transcript=0bp_to_uc002iqn.1_5end|description=CAGE_peak_1_at_TMEM92_5end|id=chr17:48351809..48351870,+|ontology_enrichment_celltype=CL:0000066!9.92e-32!254;CL:0002076!1.01e-13!43;CL:0000223!8.17e-13!59;CL:1000497!2.49e-07!18;CL:0002518!2.49e-07!18;CL:0002368!8.79e-07!13|ontology_enrichment_celltype_v019=CL:0002076;2.33e-12;42!CL:1000497;4.64e-10;17!CL:0002518;4.64e-10;17!CL:1000507;5.51e-09;10!CL:1000494;5.51e-09;10!CL:0002368;7.75e-09;13!CL:1000449;1.87e-08;15|ontology_enrichment_celltype_v019_2=CL:0000066,1.78e-43,253;CL:0002076,1.26e-15,42;CL:0000223,6.39e-15,58;CL:1000497,4.41e-10,17;CL:0002518,4.41e-10,17;CL:1000507,5.88e-09,10;CL:1000494,5.88e-09,10;CL:0002368,7.52e-09,13;CL:1000449,1.81e-08,15|ontology_enrichment_development_v019=CL:0000223;6.36e-09;58!UBERON:0008947;1.00e-08;29|ontology_enrichment_disease=DOID:305!7.76e-17!106;DOID:0050687!4.09e-13!143;DOID:162!7.81e-13!235;DOID:14566!1.68e-11!239|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,1.27e-20,106;DOID:0050687,2.77e-15,143;DOID:162,2.11e-11,235;DOID:14566,1.52e-10,239|ontology_enrichment_uberon=UBERON:0004119!9.97e-18!169;UBERON:0000925!9.97e-18!169;UBERON:0006595!9.97e-18!169;UBERON:0004921!4.93e-14!129;UBERON:0004185!4.93e-14!129;UBERON:0001007!6.39e-14!155;UBERON:0001555!6.39e-14!155;UBERON:0007026!6.39e-14!155;UBERON:0000466!2.51e-12!126;UBERON:0000077!5.72e-12!130;UBERON:0000464!2.66e-11!104;UBERON:0008947!4.08e-11!38;UBERON:0003258!4.08e-11!38;UBERON:0000063!7.57e-11!97;UBERON:0005177!8.85e-11!107;UBERON:0001048!2.43e-10!168;UBERON:0005911!5.60e-10!82;UBERON:0000065!5.86e-10!53;UBERON:0001004!1.44e-09!72;UBERON:0001041!2.97e-09!98;UBERON:0001008!3.59e-09!45;UBERON:0006554!7.21e-09!44;UBERON:0000481!1.06e-08!347;UBERON:0005178!1.29e-07!34;UBERON:0002224!1.29e-07!34;UBERON:0000072!2.57e-07!46;UBERON:0000064!3.31e-07!219;UBERON:0005181!4.76e-07!35;UBERON:0003104!8.73e-07!238;UBERON:0009142!8.73e-07!238;UBERON:0000062!9.14e-07!511|ontology_enrichment_uberon_v019=UBERON:0006554;9.60e-11;30!UBERON:0001008;9.60e-11;30!UBERON:0000065;3.11e-10;44!UBERON:0000072;5.13e-09;37!UBERON:0004211;5.51e-09;10!UBERON:0009773;5.51e-09;10!UBERON:0001231;5.51e-09;10!UBERON:0004810;5.51e-09;10!UBERON:0006555;1.87e-08;15!UBERON:0004819;1.87e-08;15!UBERON:0001285;1.87e-08;15!UBERON:0007684;1.87e-08;15!UBERON:0005178;6.48e-08;34!UBERON:0002224;6.48e-08;34!UBERON:0005911;1.99e-07;36!UBERON:0005181;2.55e-07;35!UBERON:0002113;3.90e-07;24!UBERON:0011143;3.90e-07;24!UBERON:0004807;6.62e-07;22!UBERON:0000489;6.72e-07;29!UBERON:0005409;8.94e-07;22!UBERON:0004921;9.17e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.55e-22,160;UBERON:0000925,2.55e-22,160;UBERON:0006595,2.55e-22,160;UBERON:0001007,1.73e-17,145;UBERON:0001555,1.73e-17,145;UBERON:0007026,1.73e-17,145;UBERON:0004921,3.86e-17,118;UBERON:0005177,6.53e-13,101;UBERON:0008947,9.55e-13,38;UBERON:0003258,9.55e-13,38;UBERON:0005911,1.10e-12,82;UBERON:0001008,3.73e-12,48;UBERON:0006554,9.40e-12,47;UBERON:0001048,8.67e-11,160;UBERON:0001041,9.69e-11,87;UBERON:0000065,1.99e-10,54;UBERON:0001004,5.00e-09,74;UBERON:0004810,5.88e-09,10;UBERON:0005178,8.26e-09,34;UBERON:0002224,8.26e-09,34;UBERON:0004211,1.81e-08,15;UBERON:0009773,1.81e-08,15;UBERON:0001231,1.81e-08,15;UBERON:0001285,1.81e-08,15;UBERON:0007684,1.81e-08,15;UBERON:0004208,1.81e-08,15;UBERON:0005181,2.52e-08,35;UBERON:0006555,1.20e-07,16;UBERON:0004819,1.20e-07,16;UBERON:0009569,1.53e-07,112;UBERON:0000072,3.13e-07,47;UBERON:0002113,6.66e-07,26;UBERON:0003918,6.66e-07,26;UBERON:0011143,6.66e-07,26;UBERON:0005095,6.66e-07,26;UBERON:0007687,6.66e-07,26|phase1_expression=0,0.214100523890983,0,1.0007329835313,0,0,2.53299878168311,0,0,24.3276597136494,61.4065027815736,4.58726881473362,20.3100573235909,0.618831764800233,1.98838425436749,0,0,0.730310090387373,0,7.75662665883764,7.54802557603736,4.38836610069323,0,0.958120975510189,0.125542639594803,3.43860325865781,1.47781061009902,1.73163718890094,0,0.383829398097213,0,11.9524759182261,37.9519457660595,25.5130267015083,0,0,0.880801318004542,0,0,0.217010870715852,0,0,0,0.872389432677388,1.51150377475524,0.970336244751265,0.232429036905685,0.411167888021826,0.619412741790207,0,0,0,0,0,0,1.12945403725563,0.818718450173537,0.898893937780338,0.612167784741805,0.641858054152187,0,0,0.398927315243264,0,0,0,0.622822248995575,0,0,0.434377689410233,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,1.02290049474824,0.361439152384566,2.00535164254356,1.88300474649071,0.795285947051099,0.973269740605272,11.2496432425241,17.7383517970051,26.5261052793241,1.24430121722827,25.500670180478,14.8313777113772,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,1.952496460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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=162461 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26579 | |||
|TSSclassifier=S | |||
|UniProt=Q6UXU6 | |||
|association_with_transcript=0bp_to_uc002iqn.1_5end | |||
|description=CAGE_peak_1_at_TMEM92_5end | |||
|id=chr17:48351809..48351870,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.92e-32!254;CL:0002076!1.01e-13!43;CL:0000223!8.17e-13!59;CL:1000497!2.49e-07!18;CL:0002518!2.49e-07!18;CL:0002368!8.79e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.33e-12;42!CL:1000497;4.64e-10;17!CL:0002518;4.64e-10;17!CL:1000507;5.51e-09;10!CL:1000494;5.51e-09;10!CL:0002368;7.75e-09;13!CL:1000449;1.87e-08;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.78e-43,253;CL:0002076,1.26e-15,42;CL:0000223,6.39e-15,58;CL:1000497,4.41e-10,17;CL:0002518,4.41e-10,17;CL:1000507,5.88e-09,10;CL:1000494,5.88e-09,10;CL:0002368,7.52e-09,13;CL:1000449,1.81e-08,15 | |||
|ontology_enrichment_development_v019=CL:0000223;6.36e-09;58!UBERON:0008947;1.00e-08;29 | |||
|ontology_enrichment_disease=DOID:305!7.76e-17!106;DOID:0050687!4.09e-13!143;DOID:162!7.81e-13!235;DOID:14566!1.68e-11!239 | |||
|ontology_enrichment_disease_v019= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006554;9.60e-11;30!UBERON:0001008;9.60e-11;30!UBERON:0000065;3.11e-10;44!UBERON:0000072;5.13e-09;37!UBERON:0004211;5.51e-09;10!UBERON:0009773;5.51e-09;10!UBERON:0001231;5.51e-09;10!UBERON:0004810;5.51e-09;10!UBERON:0006555;1.87e-08;15!UBERON:0004819;1.87e-08;15!UBERON:0001285;1.87e-08;15!UBERON:0007684;1.87e-08;15!UBERON:0005178;6.48e-08;34!UBERON:0002224;6.48e-08;34!UBERON:0005911;1.99e-07;36!UBERON:0005181;2.55e-07;35!UBERON:0002113;3.90e-07;24!UBERON:0011143;3.90e-07;24!UBERON:0004807;6.62e-07;22!UBERON:0000489;6.72e-07;29!UBERON:0005409;8.94e-07;22!UBERON:0004921;9.17e-07;33 | |||
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| |||
|short_description=p1@TMEM92 | |||
}} |
Revision as of 14:29, 11 September 2013
Short description: | p1@TMEM92 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TMEM92_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002iqn.1_5end |
EntrezGene: | TMEM92 |
HGNC: | 26579 |
UniProt: | Q6UXU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.78e-43 | 253 |
endo-epithelial cell | 1.26e-15 | 42 |
endodermal cell | 6.39e-15 | 58 |
kidney cell | 4.41e-10 | 17 |
kidney epithelial cell | 4.41e-10 | 17 |
kidney tubule cell | 5.88e-09 | 10 |
nephron tubule epithelial cell | 5.88e-09 | 10 |
respiratory epithelial cell | 7.52e-09 | 13 |
epithelial cell of nephron | 1.81e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.27e-20 | 106 |
cell type cancer | 2.77e-15 | 143 |
cancer | 2.11e-11 | 235 |
disease of cellular proliferation | 1.52e-10 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.