FFCP PHASE1:Hg19::chr17:74533416..74533417,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=S|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C364|description=CAGE_peak_at_chr17:74533416..74533417,+|id=chr17:74533416..74533417,+|ontology_enrichment_celltype=CL:0002057!3.53e-49!42;CL:0000860!5.73e-45!45;CL:0000839!2.52e-39!70;CL:0000557!3.76e-39!71;CL:0002009!5.32e-36!65;CL:0000766!8.99e-36!76;CL:0002194!1.36e-33!63;CL:0000576!1.36e-33!63;CL:0000040!1.36e-33!63;CL:0000559!1.36e-33!63;CL:0000763!8.58e-33!112;CL:0000049!8.58e-33!112;CL:0002031!9.75e-19!124;CL:0000738!4.44e-18!140;CL:0002032!1.96e-17!165;CL:0000837!1.96e-17!165;CL:0000037!5.01e-16!172;CL:0000566!5.01e-16!172;CL:0000988!3.20e-14!182;CL:0002087!1.34e-12!119;CL:0000197!3.49e-08!6;CL:0000098!3.49e-08!6;CL:0002167!3.49e-08!6;CL:0000453!3.78e-08!5|ontology_enrichment_celltype_v019=CL:0000860;4.38e-57;33!CL:0002057;4.38e-57;33!CL:0000473;5.51e-48;39!CL:0000234;5.51e-48;39!CL:0000576;2.04e-35;48!CL:0000766;3.28e-27;69!CL:0000763;5.46e-13;100!CL:0000453;4.81e-11;5!CL:0000738;3.34e-09;136!CL:0002087;1.27e-07;104!CL:0000097;1.96e-07;5|ontology_enrichment_celltype_v019_2=CL:0000473,2.50e-68,48;CL:0000234,2.50e-68,48;CL:0000860,1.66e-66,42;CL:0002057,1.66e-66,42;CL:0000557,5.22e-61,67;CL:0000766,2.80e-56,72;CL:0000839,3.22e-56,66;CL:0002009,5.64e-56,61;CL:0002194,2.91e-52,59;CL:0000576,2.91e-52,59;CL:0000040,2.91e-52,59;CL:0000559,2.91e-52,59;CL:0000763,9.34e-45,108;CL:0000049,9.34e-45,108;CL:0000738,1.27e-32,136;CL:0002031,4.12e-30,120;CL:0002032,9.57e-27,161;CL:0000837,9.57e-27,161;CL:0000037,4.81e-25,168;CL:0000988,4.66e-23,177;CL:0002087,7.36e-23,115;CL:0000453,2.28e-11,5;CL:0000134,6.56e-08,354;CL:0002320,1.69e-07,361;CL:0000097,2.50e-07,5;CL:0002028,2.50e-07,5;CL:0002393,5.76e-07,9;CL:0002397,5.76e-07,9|ontology_enrichment_development_v019=CL:0002057;3.39e-47;42!CL:0000049;4.42e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!5.58e-33!80;UBERON:0001474!1.35e-29!86;UBERON:0004765!3.09e-25!101;UBERON:0001434!3.09e-25!101;UBERON:0002390!1.17e-23!102;UBERON:0003061!1.17e-23!102;UBERON:0002193!3.36e-22!112;UBERON:0002405!3.08e-20!115;UBERON:0001737!4.08e-15!9;UBERON:0002204!4.07e-14!167;UBERON:0003081!1.59e-07!216|ontology_enrichment_uberon_v019=UBERON:0001737;1.06e-21;9!UBERON:0001557;1.06e-21;9|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.61e-52,76;UBERON:0001474,1.45e-47,82;UBERON:0004765,3.23e-42,90;UBERON:0002405,1.89e-40,93;UBERON:0002390,9.65e-38,98;UBERON:0003061,9.65e-38,98;UBERON:0001434,9.81e-37,100;UBERON:0002193,4.42e-33,108;UBERON:0001737,9.70e-22,9;UBERON:0002204,3.57e-19,167;UBERON:0003081,1.85e-13,203;UBERON:0001557,3.13e-09,19;UBERON:0002384,6.03e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,6.65709330259127,0,0,0,0,0,0,0,0,0,0,0,0,2.76256653681173,3.77875943688809,8.24785808038575,2.32429036905685,3.70051099219643,8.3620720141678,0.863077176966451,2.0492856522328,4.25668013799453,1.03423704220986,4.51839278508678,5.41705946377367,2.63539275359647,7.36846605156184,4.49446968890169,1.22433556948361,2.24650318953266,5.75403413219137,2.30895910130701,1.19678194572979,4.26224750532694,1.7412554317715,5.10646702222026,6.85104473895132,2.00998932205395,6.25779502104242,4.56096573880745,3.63239701580021,2.20966581592539,3.48108626184973,2.11255286311942,5.31510749912609,6.28975936525128,0.898629049171961,1.95229960693958,3.85741408072992,0,6.76316702476906,6.21058122799755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,1.5046784585161,0,0,0,0.779873198196215,2.3568472597987,2.87994062958707,1.08321545506006,1.92136979588513,1.43065282315866,0.822189523018381,1.65810010671509,0,0.889719378972363,0.802622484269139,0,1.0197840842781,0,0,1.51811815211702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,1.2931684545505,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.72995471815166,0,0,0,0,0,2.01121560067735,5.90046415273356,6.02527574708705,2.86764329104224,8.27941887551143,3.79632990577755,2.56179485504312,7.84885860501384,9.23393176671337,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.671928512795438,0.708875486211932,0,0,0,0,1.32072651019839,3.10992173311158,2.88239906833923,1.00993946741104,0.253991577168676,0,0,0,0,0,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,7.5338563714819,4.21667878966063,0,0,4.27910715122155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,1.42743191037729,1.26161932027148,1.87426263988341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,1.484180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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=S | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_at_chr17:74533416..74533417,+ | |||
|id=chr17:74533416..74533417,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.53e-49!42;CL:0000860!5.73e-45!45;CL:0000839!2.52e-39!70;CL:0000557!3.76e-39!71;CL:0002009!5.32e-36!65;CL:0000766!8.99e-36!76;CL:0002194!1.36e-33!63;CL:0000576!1.36e-33!63;CL:0000040!1.36e-33!63;CL:0000559!1.36e-33!63;CL:0000763!8.58e-33!112;CL:0000049!8.58e-33!112;CL:0002031!9.75e-19!124;CL:0000738!4.44e-18!140;CL:0002032!1.96e-17!165;CL:0000837!1.96e-17!165;CL:0000037!5.01e-16!172;CL:0000566!5.01e-16!172;CL:0000988!3.20e-14!182;CL:0002087!1.34e-12!119;CL:0000197!3.49e-08!6;CL:0000098!3.49e-08!6;CL:0002167!3.49e-08!6;CL:0000453!3.78e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.38e-57;33!CL:0002057;4.38e-57;33!CL:0000473;5.51e-48;39!CL:0000234;5.51e-48;39!CL:0000576;2.04e-35;48!CL:0000766;3.28e-27;69!CL:0000763;5.46e-13;100!CL:0000453;4.81e-11;5!CL:0000738;3.34e-09;136!CL:0002087;1.27e-07;104!CL:0000097;1.96e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.50e-68,48;CL:0000234,2.50e-68,48;CL:0000860,1.66e-66,42;CL:0002057,1.66e-66,42;CL:0000557,5.22e-61,67;CL:0000766,2.80e-56,72;CL:0000839,3.22e-56,66;CL:0002009,5.64e-56,61;CL:0002194,2.91e-52,59;CL:0000576,2.91e-52,59;CL:0000040,2.91e-52,59;CL:0000559,2.91e-52,59;CL:0000763,9.34e-45,108;CL:0000049,9.34e-45,108;CL:0000738,1.27e-32,136;CL:0002031,4.12e-30,120;CL:0002032,9.57e-27,161;CL:0000837,9.57e-27,161;CL:0000037,4.81e-25,168;CL:0000988,4.66e-23,177;CL:0002087,7.36e-23,115;CL:0000453,2.28e-11,5;CL:0000134,6.56e-08,354;CL:0002320,1.69e-07,361;CL:0000097,2.50e-07,5;CL:0002028,2.50e-07,5;CL:0002393,5.76e-07,9;CL:0002397,5.76e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;3.39e-47;42!CL:0000049;4.42e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.58e-33!80;UBERON:0001474!1.35e-29!86;UBERON:0004765!3.09e-25!101;UBERON:0001434!3.09e-25!101;UBERON:0002390!1.17e-23!102;UBERON:0003061!1.17e-23!102;UBERON:0002193!3.36e-22!112;UBERON:0002405!3.08e-20!115;UBERON:0001737!4.08e-15!9;UBERON:0002204!4.07e-14!167;UBERON:0003081!1.59e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.06e-21;9!UBERON:0001557;1.06e-21;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.61e-52,76;UBERON:0001474,1.45e-47,82;UBERON:0004765,3.23e-42,90;UBERON:0002405,1.89e-40,93;UBERON:0002390,9.65e-38,98;UBERON:0003061,9.65e-38,98;UBERON:0001434,9.81e-37,100;UBERON:0002193,4.42e-33,108;UBERON:0001737,9.70e-22,9;UBERON:0002204,3.57e-19,167;UBERON:0003081,1.85e-13,203;UBERON:0001557,3.13e-09,19;UBERON:0002384,6.03e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0.487932798790507,0,0,0.313454721478088,0,0,0,0,0,0,0,0,6.65709330259127,0,0,0,0,0,0,0,0,0,0,0,0,2.76256653681173,3.77875943688809,8.24785808038575,2.32429036905685,3.70051099219643,8.3620720141678,0.863077176966451,2.0492856522328,4.25668013799453,1.03423704220986,4.51839278508678,5.41705946377367,2.63539275359647,7.36846605156184,4.49446968890169,1.22433556948361,2.24650318953266,5.75403413219137,2.30895910130701,1.19678194572979,4.26224750532694,1.7412554317715,5.10646702222026,6.85104473895132,2.00998932205395,6.25779502104242,4.56096573880745,3.63239701580021,2.20966581592539,3.48108626184973,2.11255286311942,5.31510749912609,6.28975936525128,0.898629049171961,1.95229960693958,3.85741408072992,0,6.76316702476906,6.21058122799755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,1.5046784585161,0,0,0,0.779873198196215,2.3568472597987,2.87994062958707,1.08321545506006,1.92136979588513,1.43065282315866,0.822189523018381,1.65810010671509,0,0.889719378972363,0.802622484269139,0,1.0197840842781,0,0,1.51811815211702,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,1.2931684545505,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0.72995471815166,0,0,0,0,0,2.01121560067735,5.90046415273356,6.02527574708705,2.86764329104224,8.27941887551143,3.79632990577755,2.56179485504312,7.84885860501384,9.23393176671337,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0.671928512795438,0.708875486211932,0,0,0,0,1.32072651019839,3.10992173311158,2.88239906833923,1.00993946741104,0.253991577168676,0,0,0,0,0,1.42913216315289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.72990245129524,7.5338563714819,4.21667878966063,0,0,4.27910715122155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,1.42743191037729,1.26161932027148,1.87426263988341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31178950409327,0,0,0,0.430234056612155,0.392996164052485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0.649243880549111,0,0,0,0,3.04725200042886,0,0,0,0,0,0,0,0,0,0,0.811367035427949,0,0,0,0,0,0,0,0.71623345421307,1.18785872333055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321506296930038,0.550157746388935,0.83088067605837,3.59958226482401,1.5476039091159,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0342636508924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,1.14681839138014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899606224327209,0,1.24411862352257,0,0.521745061811734,0,0.761610424337591,0,0,0,0.928067519756987,0.398095888698616,0,2.06037423109676,1.34699795506368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14346339723327,1.99297260470045,1.79921933681429,0,0,0,0,0,0,0,0,0.699397538597222,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0.62041277132864,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76677620403451,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65833887891756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:74533416..74533417,+ | |||
}} |
Revision as of 15:48, 11 September 2013
Short description: | p@chr17:74533416..74533417, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:74533416..74533417, + |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.50e-68 | 48 |
phagocyte | 2.50e-68 | 48 |
classical monocyte | 1.66e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.66e-66 | 42 |
granulocyte monocyte progenitor cell | 5.22e-61 | 67 |
myeloid leukocyte | 2.80e-56 | 72 |
myeloid lineage restricted progenitor cell | 3.22e-56 | 66 |
macrophage dendritic cell progenitor | 5.64e-56 | 61 |
monopoietic cell | 2.91e-52 | 59 |
monocyte | 2.91e-52 | 59 |
monoblast | 2.91e-52 | 59 |
promonocyte | 2.91e-52 | 59 |
myeloid cell | 9.34e-45 | 108 |
common myeloid progenitor | 9.34e-45 | 108 |
leukocyte | 1.27e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 4.12e-30 | 120 |
hematopoietic oligopotent progenitor cell | 9.57e-27 | 161 |
hematopoietic multipotent progenitor cell | 9.57e-27 | 161 |
hematopoietic stem cell | 4.81e-25 | 168 |
hematopoietic cell | 4.66e-23 | 177 |
nongranular leukocyte | 7.36e-23 | 115 |
Langerhans cell | 2.28e-11 | 5 |
mesenchymal cell | 6.56e-08 | 354 |
connective tissue cell | 1.69e-07 | 361 |
mast cell | 2.50e-07 | 5 |
basophil mast progenitor cell | 2.50e-07 | 5 |
intermediate monocyte | 5.76e-07 | 9 |
CD14-positive, CD16-positive monocyte | 5.76e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.61e-52 | 76 |
bone element | 1.45e-47 | 82 |
skeletal element | 3.23e-42 | 90 |
immune system | 1.89e-40 | 93 |
hematopoietic system | 9.65e-38 | 98 |
blood island | 9.65e-38 | 98 |
skeletal system | 9.81e-37 | 100 |
hemolymphoid system | 4.42e-33 | 108 |
larynx | 9.70e-22 | 9 |
musculoskeletal system | 3.57e-19 | 167 |
lateral plate mesoderm | 1.85e-13 | 203 |
upper respiratory tract | 3.13e-09 | 19 |
connective tissue | 6.03e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.