FFCP PHASE1:Hg19::chr17:79849695..79849711,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10189|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19071|TSSclassifier=S|UniProt=Q86V81,E9PB61|association_with_transcript=-233bp_to_ENST00000331204,ENST00000505490,NM_005782,uc002kbu.2_5end|description=CAGE_peak_6_at_ALYREF_5end|id=chr17:79849695..79849711,-|ontology_enrichment_celltype=CL:0000066!9.10e-18!254;CL:0000548!3.26e-14!679;CL:0000004!3.26e-14!679;CL:0000255!3.26e-14!679;CL:0000012!9.56e-14!682;CL:0000003!3.08e-10!722;CL:0000063!1.31e-09!578|ontology_enrichment_celltype_v019=CL:0002188;2.21e-10;5!CL:1000449;4.79e-09;15!CL:1000497;6.03e-08;17!CL:0002518;6.03e-08;17!CL:1000746;1.54e-07;7!CL:1000612;1.54e-07;7|ontology_enrichment_celltype_v019_2=CL:0002188,2.79e-10,5;CL:1000449,5.44e-09,15;CL:1000497,6.74e-08,17;CL:0002518,6.74e-08,17;CL:1000746,1.82e-07,7;CL:1000612,1.82e-07,7;CL:0000511,7.19e-07,1;CL:0002625,7.19e-07,1;CL:0000216,7.19e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:162!1.63e-25!235;DOID:14566!4.03e-25!239;DOID:0050687!2.53e-14!143;DOID:305!8.51e-14!106;DOID:2531!7.27e-12!51;DOID:0060083!7.27e-12!51;DOID:0050686!2.28e-11!137;DOID:1240!1.00e-07!39|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0002113;1.84e-13;24!UBERON:0011143;1.84e-13;24!UBERON:0000489;6.35e-11;29!UBERON:0006554;1.62e-10;30!UBERON:0001008;1.62e-10;30!UBERON:0006555;4.79e-09;15!UBERON:0004819;4.79e-09;15!UBERON:0001285;4.79e-09;15!UBERON:0007684;4.79e-09;15!UBERON:0005172;2.21e-08;52!UBERON:0005173;2.21e-08;52!UBERON:0000074;1.54e-07;7!UBERON:0001229;1.54e-07;7!UBERON:0002417;9.88e-07;58!UBERON:0000916;9.88e-07;58|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.26e-12,26;UBERON:0003918,2.26e-12,26;UBERON:0011143,2.26e-12,26;UBERON:0005095,2.26e-12,26;UBERON:0007687,2.26e-12,26;UBERON:0005172,5.10e-12,54;UBERON:0005173,5.10e-12,54;UBERON:0002417,1.41e-10,60;UBERON:0000916,1.41e-10,60;UBERON:0000489,3.58e-10,31;UBERON:0004211,5.44e-09,15;UBERON:0009773,5.44e-09,15;UBERON:0001231,5.44e-09,15;UBERON:0001285,5.44e-09,15;UBERON:0007684,5.44e-09,15;UBERON:0004208,5.44e-09,15;UBERON:0006555,2.07e-08,16;UBERON:0004819,2.07e-08,16;UBERON:0004876,4.69e-08,11;UBERON:0005177,1.41e-07,101;UBERON:0010532,1.82e-07,7;UBERON:0000074,1.82e-07,7;UBERON:0001229,1.82e-07,7;UBERON:0001230,1.82e-07,7;UBERON:0003220,1.82e-07,7;UBERON:0005749,1.82e-07,7;UBERON:0004199,1.82e-07,7;UBERON:0004209,1.82e-07,7;UBERON:0004198,1.82e-07,7;UBERON:0003887,3.10e-07,12;UBERON:0001136,7.19e-07,1;UBERON:0001343,7.19e-07,1;UBERON:0004910,7.19e-07,1;UBERON:0005154,7.19e-07,1;UBERON:0005295,7.19e-07,1;UBERON:0004813,7.19e-07,1;UBERON:0005297,7.19e-07,1;UBERON:0005294,7.19e-07,1;UBERON:0010141,7.19e-07,1;UBERON:0005891,7.19e-07,1|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,3.48900583986214,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0.408001382488506,0,0,0.410623275218653,0.125542639594803,1.29902789771517,1.14940825229924,0.787107813136792,0,0.767658796194425,0,0.919421224478927,0.30120591877825,0.739508020333575,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,1.09288586487763,0.741568885568859,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0,0.626984899610432,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,0.735326160691737,0.81014194788176,0.17859945656816,0,0.225222960966644,1.53316637465883,0.949265659568129,0.916008719652036,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,1.71141546463335,0,0.469737994575059,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0.504867548488229,0,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0.946454400318751,1.18009283054671,0.964044119533928,0.772057809126758,1.08939722046203,0.71181185733329,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.570762456703795,0.790204397959275,0,0,0,0,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,1.91691339582606,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.308482478109971,0.300343057843917,0,1.23344192779897,0,0.4400297149257,0,0,0,0,0,0.5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EF}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19071 | |||
|TSSclassifier=S | |||
|UniProt=Q86V81,E9PB61 | |||
|association_with_transcript=-233bp_to_ENST00000331204,ENST00000505490,NM_005782,uc002kbu.2_5end | |||
|description=CAGE_peak_6_at_ALYREF_5end | |||
|id=chr17:79849695..79849711,- | |||
|ontology_enrichment_celltype=CL:0000066!9.10e-18!254;CL:0000548!3.26e-14!679;CL:0000004!3.26e-14!679;CL:0000255!3.26e-14!679;CL:0000012!9.56e-14!682;CL:0000003!3.08e-10!722;CL:0000063!1.31e-09!578 | |||
|ontology_enrichment_celltype_v019=CL:0002188;2.21e-10;5!CL:1000449;4.79e-09;15!CL:1000497;6.03e-08;17!CL:0002518;6.03e-08;17!CL:1000746;1.54e-07;7!CL:1000612;1.54e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.79e-10,5;CL:1000449,5.44e-09,15;CL:1000497,6.74e-08,17;CL:0002518,6.74e-08,17;CL:1000746,1.82e-07,7;CL:1000612,1.82e-07,7;CL:0000511,7.19e-07,1;CL:0002625,7.19e-07,1;CL:0000216,7.19e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.63e-25!235;DOID:14566!4.03e-25!239;DOID:0050687!2.53e-14!143;DOID:305!8.51e-14!106;DOID:2531!7.27e-12!51;DOID:0060083!7.27e-12!51;DOID:0050686!2.28e-11!137;DOID:1240!1.00e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.84e-13;24!UBERON:0011143;1.84e-13;24!UBERON:0000489;6.35e-11;29!UBERON:0006554;1.62e-10;30!UBERON:0001008;1.62e-10;30!UBERON:0006555;4.79e-09;15!UBERON:0004819;4.79e-09;15!UBERON:0001285;4.79e-09;15!UBERON:0007684;4.79e-09;15!UBERON:0005172;2.21e-08;52!UBERON:0005173;2.21e-08;52!UBERON:0000074;1.54e-07;7!UBERON:0001229;1.54e-07;7!UBERON:0002417;9.88e-07;58!UBERON:0000916;9.88e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.26e-12,26;UBERON:0003918,2.26e-12,26;UBERON:0011143,2.26e-12,26;UBERON:0005095,2.26e-12,26;UBERON:0007687,2.26e-12,26;UBERON:0005172,5.10e-12,54;UBERON:0005173,5.10e-12,54;UBERON:0002417,1.41e-10,60;UBERON:0000916,1.41e-10,60;UBERON:0000489,3.58e-10,31;UBERON:0004211,5.44e-09,15;UBERON:0009773,5.44e-09,15;UBERON:0001231,5.44e-09,15;UBERON:0001285,5.44e-09,15;UBERON:0007684,5.44e-09,15;UBERON:0004208,5.44e-09,15;UBERON:0006555,2.07e-08,16;UBERON:0004819,2.07e-08,16;UBERON:0004876,4.69e-08,11;UBERON:0005177,1.41e-07,101;UBERON:0010532,1.82e-07,7;UBERON:0000074,1.82e-07,7;UBERON:0001229,1.82e-07,7;UBERON:0001230,1.82e-07,7;UBERON:0003220,1.82e-07,7;UBERON:0005749,1.82e-07,7;UBERON:0004199,1.82e-07,7;UBERON:0004209,1.82e-07,7;UBERON:0004198,1.82e-07,7;UBERON:0003887,3.10e-07,12;UBERON:0001136,7.19e-07,1;UBERON:0001343,7.19e-07,1;UBERON:0004910,7.19e-07,1;UBERON:0005154,7.19e-07,1;UBERON:0005295,7.19e-07,1;UBERON:0004813,7.19e-07,1;UBERON:0005297,7.19e-07,1;UBERON:0005294,7.19e-07,1;UBERON:0010141,7.19e-07,1;UBERON:0005891,7.19e-07,1 | |||
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| |||
|short_description=p6@ALYREF | |||
}} |
Revision as of 16:29, 11 September 2013
Short description: | p6@ALYREF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_ALYREF_5end |
Coexpression cluster: | NA |
Association with transcript: | -233bp_to_ENST00000331204, ENST00000505490, NM_005782, uc002kbu.2_5end |
EntrezGene: | ALYREF |
HGNC: | 19071 |
UniProt: | Q86V81E9PB61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.79e-10 | 5 |
epithelial cell of nephron | 5.44e-09 | 15 |
kidney cell | 6.74e-08 | 17 |
kidney epithelial cell | 6.74e-08 | 17 |
glomerular cell | 1.82e-07 | 7 |
kidney corpuscule cell | 1.82e-07 | 7 |
androgen binding protein secreting cell | 7.19e-07 | 1 |
seminiferous tubule epithelial cell | 7.19e-07 | 1 |
Sertoli cell | 7.19e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.