FFCP PHASE1:Hg19::chr20:50827144..50827163,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-20bp_to_ENST00000454600_5end|coexpression_cluster_id=C1|description=CAGE_peak_3_at_ENST00000454600_5end|id=chr20:50827144..50827163,+|ontology_enrichment_celltype=CL:0002541!1.59e-12!3|ontology_enrichment_celltype_v019=CL:0002541;9.91e-07;3|ontology_enrichment_celltype_v019_2=CL:0002541,9.64e-07,3|ontology_enrichment_development_v019=UBERON:0003124;1.33e-17;1!UBERON:0009117;1.04e-07;10!UBERON:0005564;1.04e-07;10|ontology_enrichment_disease=DOID:1036!6.28e-18!8;DOID:1240!1.06e-07!39;DOID:8692!5.77e-07!31|ontology_enrichment_disease_v019=DOID:1036;5.09e-33;8!DOID:1240;2.35e-10;39!DOID:8692;4.40e-09;31|ontology_enrichment_disease_v019_2=DOID:1036,5.09e-33,8;DOID:1240,1.31e-10,39;DOID:8692,8.47e-09,31;DOID:2531,4.09e-08,51;DOID:0060083,4.09e-08,51|ontology_enrichment_uberon=UBERON:0000473!7.15e-18!8;UBERON:0003135!4.64e-13!11;UBERON:0000476!1.59e-12!3;UBERON:0000920!1.59e-12!3;UBERON:0003124!9.09e-12!7;UBERON:0001282!2.84e-10!1;UBERON:0009842!2.84e-10!1;UBERON:0003704!2.84e-10!1;UBERON:0001171!2.84e-10!1;UBERON:0001172!2.84e-10!1;UBERON:0005631!4.32e-10!14;UBERON:0000158!4.32e-10!14;UBERON:0000991!6.55e-07!21;UBERON:0009196!6.55e-07!21;UBERON:0009117!6.55e-07!21;UBERON:0005564!6.55e-07!21|ontology_enrichment_uberon_v019=UBERON:0001282;6.78e-18;1!UBERON:0009842;6.78e-18;1!UBERON:0003704;6.78e-18;1!UBERON:0001171;6.78e-18;1!UBERON:0001172;6.78e-18;1!UBERON:0000473;2.03e-09;8!UBERON:0003135;4.37e-07;11!UBERON:0001280;7.92e-07;3!UBERON:0004647;7.92e-07;3!UBERON:0003124;9.91e-07;3!UBERON:0000920;9.91e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.37e-18,1;UBERON:0009842,7.37e-18,1;UBERON:0003704,7.37e-18,1;UBERON:0001171,7.37e-18,1;UBERON:0001172,7.37e-18,1;UBERON:0003124,2.83e-10,7;UBERON:0000473,2.07e-09,8;UBERON:0003135,4.43e-07,11;UBERON:0001280,8.15e-07,3;UBERON:0004647,8.15e-07,3;UBERON:0005171,8.15e-07,3;UBERON:0000920,9.64e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,2.45175445410452,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05095700524602,0,0,0,1.27600463892768,0.366390373607449,0,0,0,0,1.1279783030859,1.76456280885966,2.01385904371011,2.84630599086278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64127056201227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0,0,0.250707539292375,4.47094319487613,11.7904217268719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@ENST00000454600}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENST00000454600_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_ENST00000454600_5end | |||
|id=chr20:50827144..50827163,+ | |||
|ontology_enrichment_celltype=CL:0002541!1.59e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.33e-17;1!UBERON:0009117;1.04e-07;10!UBERON:0005564;1.04e-07;10 | |||
|ontology_enrichment_disease=DOID:1036!6.28e-18!8;DOID:1240!1.06e-07!39;DOID:8692!5.77e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.09e-33;8!DOID:1240;2.35e-10;39!DOID:8692;4.40e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,5.09e-33,8;DOID:1240,1.31e-10,39;DOID:8692,8.47e-09,31;DOID:2531,4.09e-08,51;DOID:0060083,4.09e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0000473!7.15e-18!8;UBERON:0003135!4.64e-13!11;UBERON:0000476!1.59e-12!3;UBERON:0000920!1.59e-12!3;UBERON:0003124!9.09e-12!7;UBERON:0001282!2.84e-10!1;UBERON:0009842!2.84e-10!1;UBERON:0003704!2.84e-10!1;UBERON:0001171!2.84e-10!1;UBERON:0001172!2.84e-10!1;UBERON:0005631!4.32e-10!14;UBERON:0000158!4.32e-10!14;UBERON:0000991!6.55e-07!21;UBERON:0009196!6.55e-07!21;UBERON:0009117!6.55e-07!21;UBERON:0005564!6.55e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.78e-18;1!UBERON:0009842;6.78e-18;1!UBERON:0003704;6.78e-18;1!UBERON:0001171;6.78e-18;1!UBERON:0001172;6.78e-18;1!UBERON:0000473;2.03e-09;8!UBERON:0003135;4.37e-07;11!UBERON:0001280;7.92e-07;3!UBERON:0004647;7.92e-07;3!UBERON:0003124;9.91e-07;3!UBERON:0000920;9.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.37e-18,1;UBERON:0009842,7.37e-18,1;UBERON:0003704,7.37e-18,1;UBERON:0001171,7.37e-18,1;UBERON:0001172,7.37e-18,1;UBERON:0003124,2.83e-10,7;UBERON:0000473,2.07e-09,8;UBERON:0003135,4.43e-07,11;UBERON:0001280,8.15e-07,3;UBERON:0004647,8.15e-07,3;UBERON:0005171,8.15e-07,3;UBERON:0000920,9.64e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.90080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,0,0,0,0,0,0,0,2.45175445410452,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05095700524602,0,0,0,1.27600463892768,0.366390373607449,0,0,0,0,1.1279783030859,1.76456280885966,2.01385904371011,2.84630599086278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.64127056201227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509944148709909,0,0,0.250707539292375,4.47094319487613,11.7904217268719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@ENST00000454600 | |||
}} |
Revision as of 09:10, 12 September 2013
Short description: | p3@ENST00000454600 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENST00000454600_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -20bp_to_ENST00000454600_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.37e-18 | 1 |
acinus | 7.37e-18 | 1 |
intrahepatic bile duct | 7.37e-18 | 1 |
portal lobule | 7.37e-18 | 1 |
hepatic acinus | 7.37e-18 | 1 |
chorion | 2.83e-10 | 7 |
testis | 2.07e-09 | 8 |
male reproductive organ | 4.43e-07 | 11 |
liver parenchyma | 8.15e-07 | 3 |
liver lobule | 8.15e-07 | 3 |
hepatic duct | 8.15e-07 | 3 |
egg chorion | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 5.09e-33 | 8 |
leukemia | 1.31e-10 | 39 |
myeloid leukemia | 8.47e-09 | 31 |
hematologic cancer | 4.09e-08 | 51 |
immune system cancer | 4.09e-08 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.