FFCP PHASE1:Mm9::chr10:120911138..120911151,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=855|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:120911138..120911151,-|id=chr10:120911138..120911151,-|ontology_enrichment_celltype=CL:0000791!3.83e-14!9;CL:0000789!3.83e-14!9;CL:0002420!3.83e-14!9;CL:0002419!3.83e-14!9;CL:0000790!3.83e-14!9;CL:0002031!9.54e-13!25;CL:0000624!1.04e-12!8;CL:0000063!1.38e-12!66;CL:0000838!1.54e-12!12;CL:0000988!1.53e-11!32;CL:0002032!1.53e-11!32;CL:0000037!1.53e-11!32;CL:0000566!1.53e-11!32;CL:0000837!1.53e-11!32;CL:0000542!2.30e-11!13;CL:0000051!2.30e-11!13;CL:0000084!3.81e-11!11;CL:0000827!3.81e-11!11;CL:0002563!3.37e-10!9;CL:0002251!3.37e-10!9;CL:0000738!1.07e-09!17;CL:0002087!1.07e-09!17;CL:0000893!1.30e-09!6;CL:0002489!1.30e-09!6;CL:0000898!1.30e-09!6;CL:0000809!1.30e-09!6;CL:0000810!1.30e-09!6;CL:0000895!1.30e-09!6;CL:0000808!1.30e-09!6;CL:0000894!1.30e-09!6;CL:0000806!1.30e-09!6;CL:0000807!1.30e-09!6;CL:0000805!1.30e-09!6;CL:0002425!1.30e-09!6;CL:0002436!1.30e-09!6;CL:0002427!1.30e-09!6;CL:0002428!1.30e-09!6;CL:0002429!1.30e-09!6;CL:0002433!1.30e-09!6;CL:0002431!1.30e-09!6;CL:0002432!1.30e-09!6;CL:0002320!1.17e-08!46;CL:0000134!1.17e-08!46|ontology_enrichment_celltype_v019_2=CL:0000838,1.08e-16,12;CL:0000791,6.77e-16,9;CL:0000789,6.77e-16,9;CL:0002420,6.77e-16,9;CL:0002419,6.77e-16,9;CL:0000790,6.77e-16,9;CL:0000542,2.21e-15,13;CL:0000051,2.21e-15,13;CL:0000084,5.42e-13,11;CL:0000827,5.42e-13,11;CL:0000624,5.91e-12,8;CL:0000738,1.12e-11,17;CL:0002087,1.12e-11,17;CL:0002250,5.45e-08,3;CL:0002031,8.26e-08,25;CL:0000815,3.59e-07,1;CL:0000792,3.59e-07,1;CL:0000213,4.68e-07,1;CL:0002078,4.68e-07,1;CL:0000115,4.68e-07,1;CL:0002262,4.68e-07,1;CL:1000398,4.68e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.84e-08,3;DOID:4045,1.84e-08,3|ontology_enrichment_uberon=UBERON:0003350!3.37e-10!9;UBERON:0004808!3.37e-10!9;UBERON:0001277!3.37e-10!9;UBERON:0002384!1.17e-08!46;UBERON:0004923!1.70e-08!24;UBERON:0001242!4.79e-08!13;UBERON:0000060!4.79e-08!13;UBERON:0001262!4.79e-08!13;UBERON:0004786!4.79e-08!13;UBERON:0000485!5.04e-08!11;UBERON:0000490!2.50e-07!66;UBERON:0003929!6.14e-07!55|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.68e-07,1;UBERON:0001281,4.68e-07,1;UBERON:0000353,4.68e-07,1;UBERON:0003497,4.68e-07,1;UBERON:0003909,4.68e-07,1;UBERON:0003928,4.68e-07,1;UBERON:0003835,4.68e-07,1;UBERON:0003513,4.68e-07,1;UBERON:0001280,4.68e-07,1;UBERON:0004647,4.68e-07,1;UBERON:0002294,4.68e-07,1;UBERON:0001173,4.68e-07,1;UBERON:0004912,4.68e-07,1;UBERON:0005171,4.68e-07,1|phase1_expression=0,0.697950815278722,0,0.60492842261366,0.500895729946347,0.33575854382378,0.467225281191051,7.23090611272827,0.703943610758334,0.936258105287974,0.34243593645101,0.319088635981346,8.56003649656029,8.04267702254776,0.333109761815663,0.202475267389826,0,0.946386496074713,0.822686601634433,0.42438965179803,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,1.73310971850765,0.664938581433969,1.02084678131185,2.09265815368454,3.1253413780952,0.523523743973798,5.29408339227913,2.04913645487534,1.94204141212461,0,0,0,0,0,0,0,0,0,1.67782606057736,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2175607966302,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,1.03552062350364,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:120911138..120911151,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=855 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:120911138..120911151,- | |||
|id=chr10:120911138..120911151,- | |||
|ontology_enrichment_celltype=CL:0000791!3.83e-14!9;CL:0000789!3.83e-14!9;CL:0002420!3.83e-14!9;CL:0002419!3.83e-14!9;CL:0000790!3.83e-14!9;CL:0002031!9.54e-13!25;CL:0000624!1.04e-12!8;CL:0000063!1.38e-12!66;CL:0000838!1.54e-12!12;CL:0000988!1.53e-11!32;CL:0002032!1.53e-11!32;CL:0000037!1.53e-11!32;CL:0000566!1.53e-11!32;CL:0000837!1.53e-11!32;CL:0000542!2.30e-11!13;CL:0000051!2.30e-11!13;CL:0000084!3.81e-11!11;CL:0000827!3.81e-11!11;CL:0002563!3.37e-10!9;CL:0002251!3.37e-10!9;CL:0000738!1.07e-09!17;CL:0002087!1.07e-09!17;CL:0000893!1.30e-09!6;CL:0002489!1.30e-09!6;CL:0000898!1.30e-09!6;CL:0000809!1.30e-09!6;CL:0000810!1.30e-09!6;CL:0000895!1.30e-09!6;CL:0000808!1.30e-09!6;CL:0000894!1.30e-09!6;CL:0000806!1.30e-09!6;CL:0000807!1.30e-09!6;CL:0000805!1.30e-09!6;CL:0002425!1.30e-09!6;CL:0002436!1.30e-09!6;CL:0002427!1.30e-09!6;CL:0002428!1.30e-09!6;CL:0002429!1.30e-09!6;CL:0002433!1.30e-09!6;CL:0002431!1.30e-09!6;CL:0002432!1.30e-09!6;CL:0002320!1.17e-08!46;CL:0000134!1.17e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.08e-16,12;CL:0000791,6.77e-16,9;CL:0000789,6.77e-16,9;CL:0002420,6.77e-16,9;CL:0002419,6.77e-16,9;CL:0000790,6.77e-16,9;CL:0000542,2.21e-15,13;CL:0000051,2.21e-15,13;CL:0000084,5.42e-13,11;CL:0000827,5.42e-13,11;CL:0000624,5.91e-12,8;CL:0000738,1.12e-11,17;CL:0002087,1.12e-11,17;CL:0002250,5.45e-08,3;CL:0002031,8.26e-08,25;CL:0000815,3.59e-07,1;CL:0000792,3.59e-07,1;CL:0000213,4.68e-07,1;CL:0002078,4.68e-07,1;CL:0000115,4.68e-07,1;CL:0002262,4.68e-07,1;CL:1000398,4.68e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.84e-08,3;DOID:4045,1.84e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!3.37e-10!9;UBERON:0004808!3.37e-10!9;UBERON:0001277!3.37e-10!9;UBERON:0002384!1.17e-08!46;UBERON:0004923!1.70e-08!24;UBERON:0001242!4.79e-08!13;UBERON:0000060!4.79e-08!13;UBERON:0001262!4.79e-08!13;UBERON:0004786!4.79e-08!13;UBERON:0000485!5.04e-08!11;UBERON:0000490!2.50e-07!66;UBERON:0003929!6.14e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,4.68e-07,1;UBERON:0001281,4.68e-07,1;UBERON:0000353,4.68e-07,1;UBERON:0003497,4.68e-07,1;UBERON:0003909,4.68e-07,1;UBERON:0003928,4.68e-07,1;UBERON:0003835,4.68e-07,1;UBERON:0003513,4.68e-07,1;UBERON:0001280,4.68e-07,1;UBERON:0004647,4.68e-07,1;UBERON:0002294,4.68e-07,1;UBERON:0001173,4.68e-07,1;UBERON:0004912,4.68e-07,1;UBERON:0005171,4.68e-07,1 | |||
|phase1_expression=0,0.697950815278722,0,0.60492842261366,0.500895729946347,0.33575854382378,0.467225281191051,7.23090611272827,0.703943610758334,0.936258105287974,0.34243593645101,0.319088635981346,8.56003649656029,8.04267702254776,0.333109761815663,0.202475267389826,0,0.946386496074713,0.822686601634433,0.42438965179803,0.0850432901510698,0,0,0,0,0.57423196411502,0,0,0.190023419456374,0,0,0,0,0,1.73310971850765,0.664938581433969,1.02084678131185,2.09265815368454,3.1253413780952,0.523523743973798,5.29408339227913,2.04913645487534,1.94204141212461,0,0,0,0,0,0,0,0,0,1.67782606057736,2.17608642603403,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2175607966302,0,0,0.539703191637817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.29468941823586,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0.19496408711912,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0.188368457004691,0,0.228778173206523,0,0.139951452323658,0,0,0,0,0,0,0,0.269728692769641,0,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0.675022500231806,0,0,1.03552062350364,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:120911138..120911151,- | |||
}} |
Revision as of 15:54, 12 September 2013
Short description: | p@chr10:120911138..120911151, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:120911138..120911151, - |
Coexpression cluster: | MCL_coexpression_mm9:855 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.08e-16 | 12 |
mature alpha-beta T cell | 6.77e-16 | 9 |
alpha-beta T cell | 6.77e-16 | 9 |
immature T cell | 6.77e-16 | 9 |
mature T cell | 6.77e-16 | 9 |
immature alpha-beta T cell | 6.77e-16 | 9 |
lymphocyte | 2.21e-15 | 13 |
common lymphoid progenitor | 2.21e-15 | 13 |
T cell | 5.42e-13 | 11 |
pro-T cell | 5.42e-13 | 11 |
CD4-positive, alpha-beta T cell | 5.91e-12 | 8 |
leukocyte | 1.12e-11 | 17 |
nongranular leukocyte | 1.12e-11 | 17 |
intestinal crypt stem cell | 5.45e-08 | 3 |
hematopoietic lineage restricted progenitor cell | 8.26e-08 | 25 |
regulatory T cell | 3.59e-07 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.59e-07 | 1 |
lining cell | 4.68e-07 | 1 |
meso-epithelial cell | 4.68e-07 | 1 |
endothelial cell | 4.68e-07 | 1 |
endothelial cell of sinusoid | 4.68e-07 | 1 |
endothelial cell of hepatic sinusoid | 4.68e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bile duct | 4.68e-07 | 1 |
hepatic sinusoid | 4.68e-07 | 1 |
parenchyma | 4.68e-07 | 1 |
abdomen blood vessel | 4.68e-07 | 1 |
sinusoid | 4.68e-07 | 1 |
digestive system duct | 4.68e-07 | 1 |
abdominal segment blood vessel | 4.68e-07 | 1 |
trunk blood vessel | 4.68e-07 | 1 |
liver parenchyma | 4.68e-07 | 1 |
liver lobule | 4.68e-07 | 1 |
biliary system | 4.68e-07 | 1 |
biliary tree | 4.68e-07 | 1 |
biliary bud | 4.68e-07 | 1 |
hepatic duct | 4.68e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.84e-08 | 3 |
muscle cancer | 1.84e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.