FFCP PHASE1:Mm9::chr11:115889275..115889292,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=15078,15081,623365,625328,627371,636952,638008,667250|HGNC=|MCL_coexpression_id=86|UniProt=P84244|association_with_transcript=0bp_to_ENSMUST00000106454_5end|description=CAGE_peak_9_at_Gm12657_5end,CAGE_peak_9_at_Gm6421_5end,CAGE_peak_9_at_Gm6749_5end,CAGE_peak_9_at_Gm7194_5end,CAGE_peak_9_at_Gm7227_5end,CAGE_peak_9_at_H3f3a_5end,CAGE_peak_9_at_H3f3b_5end,CAGE_peak_9_at_H3f3c_5end|id=chr11:115889275..115889292,-|ontology_enrichment_celltype=CL:0000557!1.75e-08!7|ontology_enrichment_celltype_v019_2=CL:0000557,2.52e-19,7;CL:0002320,5.24e-15,46;CL:0000134,5.24e-15,46;CL:0000049,5.16e-13,19;CL:0000219,1.56e-12,54;CL:0002476,5.57e-12,2;CL:0000182,4.68e-10,5;CL:0000763,2.19e-08,16;CL:0002092,2.62e-08,3;CL:0002540,2.62e-08,3;CL:0000988,1.91e-07,32;CL:0002032,1.91e-07,32;CL:0000037,1.91e-07,32;CL:0000837,1.91e-07,32;CL:0000213,7.38e-07,1;CL:0002078,7.38e-07,1;CL:0000115,7.38e-07,1;CL:0002262,7.38e-07,1;CL:1000398,7.38e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!7.86e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.54e-16,16;UBERON:0002384,5.24e-15,46;UBERON:0001474,1.68e-11,22;UBERON:0004765,1.68e-11,22;UBERON:0001434,1.68e-11,22;UBERON:0002204,1.11e-07,32;UBERON:0002394,7.38e-07,1;UBERON:0001281,7.38e-07,1;UBERON:0000353,7.38e-07,1;UBERON:0003497,7.38e-07,1;UBERON:0003909,7.38e-07,1;UBERON:0003928,7.38e-07,1;UBERON:0003835,7.38e-07,1;UBERON:0003513,7.38e-07,1;UBERON:0001280,7.38e-07,1;UBERON:0004647,7.38e-07,1;UBERON:0002294,7.38e-07,1;UBERON:0001173,7.38e-07,1;UBERON:0004912,7.38e-07,1;UBERON:0005171,7.38e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,2.94115744015507,0.683045484958446,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1496490104849,7.9109309005358,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,4.63783181922684,0.860423876981386,2.03991400112325,0,0.649776417447669,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0,0,0,0.150722640552623,0,0.376999773989026,0.247194967734374,0.86759614151947,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,0,0,2.80885274925294,3.08817488537658,3.6941254921427,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0.896987067609561,1.4473305640901,1.29327233116623,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,3.01582567878545,16.86107619838,0,0.275936746304732,0,0,0,0,0,0,0,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,0.49465875882444,0.484393280087717,0.422190474497091,0.358117032009409,0.492422699235184,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,1.24267862617385,0.56369293868419,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.201652370273681,0,0.384847366561318,0.233753804363138,0.453460767230423,0,0,0,0,0.93841237725591,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0|short_description=p9@Gm12657,p9@Gm6421,p9@Gm6749,p9@Gm7194,p9@Gm7227,p9@H3f3a,p9@H3f3b,p9@H3f3c}} | ||
|EntrezGene=15078,15081,623365,625328,627371,636952,638008,667250 | |||
|HGNC= | |||
|MCL_coexpression_id=86 | |||
|UniProt=P84244 | |||
|association_with_transcript=0bp_to_ENSMUST00000106454_5end | |||
|description=CAGE_peak_9_at_Gm12657_5end,CAGE_peak_9_at_Gm6421_5end,CAGE_peak_9_at_Gm6749_5end,CAGE_peak_9_at_Gm7194_5end,CAGE_peak_9_at_Gm7227_5end,CAGE_peak_9_at_H3f3a_5end,CAGE_peak_9_at_H3f3b_5end,CAGE_peak_9_at_H3f3c_5end | |||
|id=chr11:115889275..115889292,- | |||
|ontology_enrichment_celltype=CL:0000557!1.75e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,2.52e-19,7;CL:0002320,5.24e-15,46;CL:0000134,5.24e-15,46;CL:0000049,5.16e-13,19;CL:0000219,1.56e-12,54;CL:0002476,5.57e-12,2;CL:0000182,4.68e-10,5;CL:0000763,2.19e-08,16;CL:0002092,2.62e-08,3;CL:0002540,2.62e-08,3;CL:0000988,1.91e-07,32;CL:0002032,1.91e-07,32;CL:0000037,1.91e-07,32;CL:0000837,1.91e-07,32;CL:0000213,7.38e-07,1;CL:0002078,7.38e-07,1;CL:0000115,7.38e-07,1;CL:0002262,7.38e-07,1;CL:1000398,7.38e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!7.86e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.54e-16,16;UBERON:0002384,5.24e-15,46;UBERON:0001474,1.68e-11,22;UBERON:0004765,1.68e-11,22;UBERON:0001434,1.68e-11,22;UBERON:0002204,1.11e-07,32;UBERON:0002394,7.38e-07,1;UBERON:0001281,7.38e-07,1;UBERON:0000353,7.38e-07,1;UBERON:0003497,7.38e-07,1;UBERON:0003909,7.38e-07,1;UBERON:0003928,7.38e-07,1;UBERON:0003835,7.38e-07,1;UBERON:0003513,7.38e-07,1;UBERON:0001280,7.38e-07,1;UBERON:0004647,7.38e-07,1;UBERON:0002294,7.38e-07,1;UBERON:0001173,7.38e-07,1;UBERON:0004912,7.38e-07,1;UBERON:0005171,7.38e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,2.94115744015507,0.683045484958446,0.971020706062307,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1496490104849,7.9109309005358,0,0.299600110518405,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0.151143120213571,4.63783181922684,0.860423876981386,2.03991400112325,0,0.649776417447669,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.593768556259299,0,0,0,0.150722640552623,0,0.376999773989026,0.247194967734374,0.86759614151947,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,0.359445373517761,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0.101839363850316,0,0.505445516867349,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0.696504333044333,0,0,2.80885274925294,3.08817488537658,3.6941254921427,0,0,0,0,0.196764231747404,0,0,0,0,0,0,0.0810688095458557,0.146199987425332,0.439100230582101,0.268412837520744,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0.252578877947112,0.896987067609561,1.4473305640901,1.29327233116623,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0,0,0.163863314715738,0,0.289298117163023,3.01582567878545,16.86107619838,0,0.275936746304732,0,0,0,0,0,0,0,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0.395287777946524,0,0.141940085208269,0,0,0.164970122972535,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0.220528398054962,0.49465875882444,0.484393280087717,0.422190474497091,0.358117032009409,0.492422699235184,0,0,0.170870880797853,0,0,0,0,0,0.169978429993855,0.279902904647316,0,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0,1.24267862617385,0.56369293868419,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0.201652370273681,0,0.384847366561318,0.233753804363138,0.453460767230423,0,0,0,0,0.93841237725591,0.915758121336325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0.429742108096597,0,0,0 | |||
|short_description=p9@Gm12657,p9@Gm6421,p9@Gm6749,p9@Gm7194,p9@Gm7227,p9@H3f3a,p9@H3f3b,p9@H3f3c | |||
}} |
Revision as of 18:48, 12 September 2013
Short description: | p9@Gm12657, p9@Gm6421, p9@Gm6749, p9@Gm7194, p9@Gm7227, p9@H3f3a, p9@H3f3b, p9@H3f3c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Gm12657_5end, CAGE_peak_9_at_Gm6421_5end, CAGE_peak_9_at_Gm6749_5end, CAGE_peak_9_at_Gm7194_5end, CAGE_peak_9_at_Gm7227_5end, CAGE_peak_9_at_H3f3a_5end, CAGE_peak_9_at_H3f3b_5end, CAGE_peak_9_at_H3f3c_5end |
Coexpression cluster: | MCL_coexpression_mm9:86 |
Association with transcript: | 0bp_to_ENSMUST00000106454_5end |
EntrezGene: | 15078,15081,623365,625328,627371,636952,638008,667250 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 2.52e-19 | 7 |
connective tissue cell | 5.24e-15 | 46 |
mesenchymal cell | 5.24e-15 | 46 |
common myeloid progenitor | 5.16e-13 | 19 |
motile cell | 1.56e-12 | 54 |
bone marrow macrophage | 5.57e-12 | 2 |
hepatocyte | 4.68e-10 | 5 |
myeloid cell | 2.19e-08 | 16 |
bone marrow cell | 2.62e-08 | 3 |
mesenchymal stem cell of the bone marrow | 2.62e-08 | 3 |
hematopoietic cell | 1.91e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.91e-07 | 32 |
hematopoietic stem cell | 1.91e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.91e-07 | 32 |
lining cell | 7.38e-07 | 1 |
meso-epithelial cell | 7.38e-07 | 1 |
endothelial cell | 7.38e-07 | 1 |
endothelial cell of sinusoid | 7.38e-07 | 1 |
endothelial cell of hepatic sinusoid | 7.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.54e-16 | 16 |
connective tissue | 5.24e-15 | 46 |
bone element | 1.68e-11 | 22 |
skeletal element | 1.68e-11 | 22 |
skeletal system | 1.68e-11 | 22 |
musculoskeletal system | 1.11e-07 | 32 |
bile duct | 7.38e-07 | 1 |
hepatic sinusoid | 7.38e-07 | 1 |
parenchyma | 7.38e-07 | 1 |
abdomen blood vessel | 7.38e-07 | 1 |
sinusoid | 7.38e-07 | 1 |
digestive system duct | 7.38e-07 | 1 |
abdominal segment blood vessel | 7.38e-07 | 1 |
trunk blood vessel | 7.38e-07 | 1 |
liver parenchyma | 7.38e-07 | 1 |
liver lobule | 7.38e-07 | 1 |
biliary system | 7.38e-07 | 1 |
biliary tree | 7.38e-07 | 1 |
biliary bud | 7.38e-07 | 1 |
hepatic duct | 7.38e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.