FFCP PHASE1:Hg19::chr3:149260370..149260390,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25937|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24042|TSSclassifier=S|UniProt=|association_with_transcript=-144bp_to_ENST00000485244_5end|coexpression_cluster_id=C1922|description=CAGE_peak_21_at_WWTR1_5end|id=chr3:149260370..149260390,-|ontology_enrichment_celltype=CL:1000497!1.72e-23!18;CL:0002518!1.72e-23!18;CL:1000449!7.95e-19!16;CL:1000507!2.95e-17!12;CL:1000494!2.95e-17!12;CL:0002078!4.25e-17!44;CL:0002681!7.57e-16!13;CL:0002584!7.57e-16!13;CL:0002139!1.05e-15!24;CL:0000066!5.26e-14!254;CL:0000115!1.75e-13!35;CL:0000213!2.58e-13!57;CL:0000215!2.58e-13!57;CL:0002543!3.46e-11!6;CL:0000071!2.37e-10!18;CL:0002546!2.37e-10!18;CL:0000222!9.67e-10!119;CL:0000239!2.02e-09!3;CL:1000615!2.02e-09!3;CL:0002306!2.02e-09!3;CL:0002618!6.80e-09!3;CL:0000220!1.59e-07!246;CL:0002321!2.17e-07!248;CL:0005020!2.98e-07!6;CL:0002138!2.98e-07!6;CL:0005022!2.98e-07!6|ontology_enrichment_celltype_v019=CL:1000497;5.85e-31;17!CL:0002518;5.85e-31;17!CL:1000449;3.43e-18;15!CL:1000507;7.57e-18;10!CL:1000494;7.57e-18;10!CL:0000239;6.74e-16;3!CL:1000615;6.74e-16;3!CL:0002306;6.74e-16;3!CL:0002681;6.36e-15;12!CL:0002584;6.36e-15;12!CL:0000313;1.48e-12;1!CL:1000746;4.16e-07;7!CL:1000612;4.16e-07;7!CL:0000159;6.61e-07;2|ontology_enrichment_celltype_v019_2=CL:1000497,6.70e-31,17;CL:0002518,6.70e-31,17;CL:1000449,3.90e-18,15;CL:1000507,8.27e-18,10;CL:1000494,8.27e-18,10;CL:0000239,7.83e-16,3;CL:1000615,7.83e-16,3;CL:0002306,7.83e-16,3;CL:0002681,7.91e-15,12;CL:0002584,7.91e-15,12;CL:0000313,1.25e-12,1;CL:1000746,4.71e-07,7;CL:1000612,4.71e-07,7;CL:0000159,6.07e-07,2|ontology_enrichment_development_v019=UBERON:0003918;4.00e-18;10!UBERON:0007687;4.00e-18;10|ontology_enrichment_disease=DOID:4468!5.48e-07!2|ontology_enrichment_disease_v019=DOID:4468;1.88e-23;2!DOID:2152;1.48e-12;1|ontology_enrichment_disease_v019_2=DOID:4468,1.78e-23,2;DOID:2152,1.25e-12,1|ontology_enrichment_uberon=UBERON:0002113!6.82e-20!27;UBERON:0003918!6.82e-20!27;UBERON:0005095!6.82e-20!27;UBERON:0007687!6.82e-20!27;UBERON:0004211!7.95e-19!16;UBERON:0001285!7.95e-19!16;UBERON:0007684!7.95e-19!16;UBERON:0003220!7.95e-19!16;UBERON:0004208!7.95e-19!16;UBERON:0006555!1.47e-17!17;UBERON:0005103!1.47e-17!17;UBERON:0000083!1.47e-17!17;UBERON:0009201!1.47e-17!17;UBERON:0004819!1.47e-17!17;UBERON:0006553!1.47e-17!17;UBERON:0003074!1.47e-17!17;UBERON:0003060!1.47e-17!17;UBERON:0009773!2.95e-17!12;UBERON:0001231!2.95e-17!12;UBERON:0004810!2.95e-17!12;UBERON:0000080!1.96e-16!18;UBERON:0002120!1.96e-16!18;UBERON:0004875!1.96e-16!18;UBERON:0005721!1.96e-16!18;UBERON:0005754!1.96e-16!18;UBERON:0007297!1.96e-16!18;UBERON:0000489!3.83e-16!32;UBERON:0001225!7.57e-16!13;UBERON:0008987!7.57e-16!13;UBERON:0001851!2.79e-15!16;UBERON:0000058!9.36e-15!26;UBERON:0004876!1.60e-14!20;UBERON:0006554!9.05e-14!44;UBERON:0003887!1.05e-13!21;UBERON:0001008!2.31e-13!45;UBERON:0005172!6.24e-13!55;UBERON:0005173!6.24e-13!55;UBERON:0002417!1.54e-12!61;UBERON:0000916!1.54e-12!61;UBERON:0003914!8.45e-12!118;UBERON:0000353!1.17e-11!17;UBERON:0003064!7.01e-11!37;UBERON:0001986!2.37e-10!18;UBERON:0004638!2.37e-10!18;UBERON:0004852!2.37e-10!18;UBERON:0005177!4.93e-10!107;UBERON:0006853!2.02e-09!3;UBERON:0007685!2.02e-09!3;UBERON:0004134!2.02e-09!3;UBERON:0009569!4.13e-09!113;UBERON:0004111!1.02e-08!241;UBERON:0000025!1.42e-08!194;UBERON:0000487!3.83e-08!22;UBERON:0003103!3.89e-08!69;UBERON:0000466!4.16e-08!126;UBERON:0001638!2.59e-07!9;UBERON:0003920!2.59e-07!9;UBERON:0004582!2.59e-07!9;UBERON:0003886!4.36e-07!63;UBERON:0006914!5.87e-07!25;UBERON:0002100!5.98e-07!216;UBERON:0000119!6.51e-07!312;UBERON:0000464!9.02e-07!104|ontology_enrichment_uberon_v019=UBERON:0002113;5.11e-36;24!UBERON:0011143;5.11e-36;24!UBERON:0000489;1.21e-29;29!UBERON:0006554;1.27e-28;30!UBERON:0001008;1.27e-28;30!UBERON:0006555;3.43e-18;15!UBERON:0004819;3.43e-18;15!UBERON:0001285;3.43e-18;15!UBERON:0007684;3.43e-18;15!UBERON:0004211;7.57e-18;10!UBERON:0009773;7.57e-18;10!UBERON:0001231;7.57e-18;10!UBERON:0004810;7.57e-18;10!UBERON:0006853;6.74e-16;3!UBERON:0007685;6.74e-16;3!UBERON:0004134;6.74e-16;3!UBERON:0001225;6.36e-15;12!UBERON:0008987;6.36e-15;12!UBERON:0004911;1.48e-12;1!UBERON:0002171;2.20e-12;1!UBERON:0006518;2.20e-12;1!UBERON:0008949;2.20e-12;1!UBERON:0000101;2.20e-12;1!UBERON:0002167;2.20e-12;1!UBERON:0001851;5.44e-12;15!UBERON:0000353;5.44e-12;15!UBERON:0005172;7.27e-11;52!UBERON:0005173;7.27e-11;52!UBERON:0002417;1.58e-09;58!UBERON:0000916;1.58e-09;58!UBERON:0000074;4.16e-07;7!UBERON:0001229;4.16e-07;7!UBERON:0005177;6.02e-07;99!UBERON:0004909;6.61e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.16e-33,26;UBERON:0003918,4.16e-33,26;UBERON:0011143,4.16e-33,26;UBERON:0005095,4.16e-33,26;UBERON:0007687,4.16e-33,26;UBERON:0000489,1.30e-27,31;UBERON:0004211,3.90e-18,15;UBERON:0009773,3.90e-18,15;UBERON:0001231,3.90e-18,15;UBERON:0001285,3.90e-18,15;UBERON:0007684,3.90e-18,15;UBERON:0004208,3.90e-18,15;UBERON:0006554,7.28e-18,47;UBERON:0004810,8.27e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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25937 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24042 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-144bp_to_ENST00000485244_5end | |||
|coexpression_cluster_id=C1922 | |||
|description=CAGE_peak_21_at_WWTR1_5end | |||
|id=chr3:149260370..149260390,- | |||
|ontology_enrichment_celltype=CL:1000497!1.72e-23!18;CL:0002518!1.72e-23!18;CL:1000449!7.95e-19!16;CL:1000507!2.95e-17!12;CL:1000494!2.95e-17!12;CL:0002078!4.25e-17!44;CL:0002681!7.57e-16!13;CL:0002584!7.57e-16!13;CL:0002139!1.05e-15!24;CL:0000066!5.26e-14!254;CL:0000115!1.75e-13!35;CL:0000213!2.58e-13!57;CL:0000215!2.58e-13!57;CL:0002543!3.46e-11!6;CL:0000071!2.37e-10!18;CL:0002546!2.37e-10!18;CL:0000222!9.67e-10!119;CL:0000239!2.02e-09!3;CL:1000615!2.02e-09!3;CL:0002306!2.02e-09!3;CL:0002618!6.80e-09!3;CL:0000220!1.59e-07!246;CL:0002321!2.17e-07!248;CL:0005020!2.98e-07!6;CL:0002138!2.98e-07!6;CL:0005022!2.98e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.85e-31;17!CL:0002518;5.85e-31;17!CL:1000449;3.43e-18;15!CL:1000507;7.57e-18;10!CL:1000494;7.57e-18;10!CL:0000239;6.74e-16;3!CL:1000615;6.74e-16;3!CL:0002306;6.74e-16;3!CL:0002681;6.36e-15;12!CL:0002584;6.36e-15;12!CL:0000313;1.48e-12;1!CL:1000746;4.16e-07;7!CL:1000612;4.16e-07;7!CL:0000159;6.61e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,6.70e-31,17;CL:0002518,6.70e-31,17;CL:1000449,3.90e-18,15;CL:1000507,8.27e-18,10;CL:1000494,8.27e-18,10;CL:0000239,7.83e-16,3;CL:1000615,7.83e-16,3;CL:0002306,7.83e-16,3;CL:0002681,7.91e-15,12;CL:0002584,7.91e-15,12;CL:0000313,1.25e-12,1;CL:1000746,4.71e-07,7;CL:1000612,4.71e-07,7;CL:0000159,6.07e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003918;4.00e-18;10!UBERON:0007687;4.00e-18;10 | |||
|ontology_enrichment_disease=DOID:4468!5.48e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;1.88e-23;2!DOID:2152;1.48e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.78e-23,2;DOID:2152,1.25e-12,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0.602694528023977,0,0,0,0.204000691244253,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,1.44076983047484,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0.24406205754817,0,0,0.625098097988558,0.898117490504679,0.450445921933289,0,2.84779697870439,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0.234817388471643,0.433099343283221,0.462985512576611,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321707842287215,0,0.154209693802656,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0.770153371044148,0,1.46139224653261,0.422206515571503,0,0,1.0795795805107,0,0.270946437543853,1.00337954770971,3.3133915495855,3.3243040357149,0.895499018888713,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43095935508857,3.7543545876604,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,10.6387704853918,2.62272940674991,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,7.86999454267915,0,1.38823636338003,0.157204305099666,2.89967338743037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214821114084977,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,16.1432156710406,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,9.71674160483796,1.43325506366115,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,3.91494011292273,0,0.609589624911347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p21@WWTR1 | |||
}} |
Revision as of 22:04, 12 September 2013
Short description: | p21@WWTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_21_at_WWTR1_5end |
Coexpression cluster: | C1922_renal_mesothelioma_serous_Renal_glioblastoma_Skeletal_lung |
Association with transcript: | -144bp_to_ENST00000485244_5end |
EntrezGene: | WWTR1 |
HGNC: | 24042 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 6.70e-31 | 17 |
kidney epithelial cell | 6.70e-31 | 17 |
epithelial cell of nephron | 3.90e-18 | 15 |
kidney tubule cell | 8.27e-18 | 10 |
nephron tubule epithelial cell | 8.27e-18 | 10 |
brush border epithelial cell | 7.83e-16 | 3 |
kidney cortex tubule cell | 7.83e-16 | 3 |
epithelial cell of proximal tubule | 7.83e-16 | 3 |
kidney cortical cell | 7.91e-15 | 12 |
renal cortical epithelial cell | 7.91e-15 | 12 |
serous secreting cell | 1.25e-12 | 1 |
glomerular cell | 4.71e-07 | 7 |
kidney corpuscule cell | 4.71e-07 | 7 |
seromucus secreting cell | 6.07e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.78e-23 | 2 |
ovary epithelial cancer | 1.25e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.