FFCP PHASE1:Hg19::chr3:179674518..179674534,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C116|description=CAGE_peak_at_chr3:179674518..179674534,+|id=chr3:179674518..179674534,+|ontology_enrichment_celltype=CL:0000838!1.43e-33!52;CL:0000542!7.58e-33!53;CL:0000051!7.58e-33!53;CL:0000945!1.14e-22!24;CL:0000826!1.14e-22!24;CL:0000037!5.16e-16!172;CL:0000566!5.16e-16!172;CL:0002032!1.70e-15!165;CL:0000837!1.70e-15!165;CL:0002087!8.12e-15!119;CL:0000988!8.52e-15!182;CL:0000084!9.56e-15!25;CL:0000827!9.56e-15!25;CL:0002031!5.06e-14!124;CL:0000738!3.26e-13!140;CL:0000817!4.13e-07!3|ontology_enrichment_celltype_v019=CL:0000084;3.73e-21;25!CL:0000542;1.71e-18;53!CL:0000945;1.66e-16;24!CL:0002127;7.89e-13;1!CL:0000911;7.89e-13;1!CL:0000814;7.89e-13;1|ontology_enrichment_celltype_v019_2=CL:0000838,2.01e-34,52;CL:0000542,9.63e-34,53;CL:0000051,9.63e-34,53;CL:0000084,3.61e-21,25;CL:0000827,3.61e-21,25;CL:0000945,1.62e-16,24;CL:0000826,1.62e-16,24;CL:0000037,1.11e-14,168;CL:0002087,1.87e-14,115;CL:0000738,5.44e-14,136;CL:0000988,7.89e-14,177;CL:0002031,8.83e-14,120;CL:0002032,2.17e-13,161;CL:0000837,2.17e-13,161;CL:0002127,7.89e-13,1;CL:0000914,7.89e-13,1;CL:0000911,7.89e-13,1;CL:0000814,7.89e-13,1;CL:0002042,7.89e-13,1;CL:0002039,7.89e-13,1;CL:0002040,7.89e-13,1;CL:0002041,7.89e-13,1;CL:0000893,4.83e-07,2;CL:0002489,4.83e-07,2;CL:0000809,4.83e-07,2;CL:0000808,4.83e-07,2;CL:0000894,4.83e-07,2;CL:0000806,4.83e-07,2;CL:0000807,4.83e-07,2;CL:0000805,4.83e-07,2;CL:0002425,4.83e-07,2|ontology_enrichment_development_v019=CL:0000051;1.71e-18;53!CL:0002425;4.83e-07;2|ontology_enrichment_disease=DOID:2531!7.10e-34!51;DOID:0060083!7.10e-34!51;DOID:0060058!1.64e-23!10;DOID:1240!2.16e-18!39;DOID:74!7.73e-11!2;DOID:0050686!1.25e-09!137|ontology_enrichment_disease_v019=DOID:0060058;1.37e-27;10!DOID:2531;2.12e-19;51!DOID:0060083;2.12e-19;51!DOID:4960;7.03e-13;1!DOID:0070004;7.03e-13;1!DOID:2355;1.18e-12;1!DOID:0060060;4.31e-12;1!DOID:0060061;4.31e-12;1!DOID:8691;4.31e-12;1!DOID:1240;7.50e-11;39!DOID:74;5.90e-07;2|ontology_enrichment_disease_v019_2=DOID:2531,1.63e-29,51;DOID:0060083,1.63e-29,51;DOID:0060058,1.30e-27,10;DOID:1240,2.89e-13,39;DOID:4960,7.03e-13,1;DOID:0070004,7.03e-13,1;DOID:2355,1.11e-12,1;DOID:0060060,3.85e-12,1;DOID:0060061,3.85e-12,1;DOID:8691,3.85e-12,1;DOID:0050686,7.35e-10,137;DOID:74,5.73e-07,2|ontology_enrichment_uberon=UBERON:0004177!2.48e-17!7;UBERON:0002370!4.41e-12!4;UBERON:0005058!4.41e-12!4;UBERON:0009113!4.41e-12!4;UBERON:0003295!4.41e-12!4;UBERON:0005562!4.41e-12!4;UBERON:0003408!3.17e-08!10;UBERON:0003351!3.40e-08!6;UBERON:0009722!2.35e-07!11;UBERON:0007690!2.35e-07!11;UBERON:0002106!4.69e-07!3;UBERON:0004854!4.69e-07!3;UBERON:0009034!4.69e-07!3;UBERON:0002095!4.69e-07!3;UBERON:0004782!4.69e-07!3;UBERON:0003281!4.69e-07!3;UBERON:0009664!4.69e-07!3;UBERON:0002296!4.69e-07!3;UBERON:0005602!4.69e-07!3;UBERON:0001179!4.69e-07!3;UBERON:0006293!4.69e-07!3|ontology_enrichment_uberon_v019=UBERON:0002370;8.55e-23;2!UBERON:0005058;8.55e-23;2!UBERON:0009113;8.55e-23;2!UBERON:0004177;1.06e-09;5!UBERON:0005057;1.06e-09;5|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.54e-25,4;UBERON:0005058,1.54e-25,4;UBERON:0009113,1.54e-25,4;UBERON:0003295,1.54e-25,4;UBERON:0005562,1.54e-25,4;UBERON:0003351,2.97e-17,6;UBERON:0004177,7.03e-15,7;UBERON:0005057,7.03e-15,7;UBERON:0000974,1.37e-10,10;UBERON:0003408,1.37e-10,10;UBERON:0001042,1.37e-10,10;UBERON:0009145,1.37e-10,10;UBERON:0006562,1.12e-09,11;UBERON:0009722,1.12e-09,11;UBERON:0007690,1.12e-09,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,8.63471484951849,9.52366837619371,11.8066171970519,0,0,0,0,0,0,0.387336002901508,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.1577933269514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144269212976445,2.98795742063339,4.14508309094938,0.399158742865633,0,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,2.06103206853459,0,0,0.166849141711909,1.17232857241224,0,0,0,0,0,0,0,0,13.9304230346848,0,0,0,0,0,0,0,10.2178402020591,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C116 | |||
|description=CAGE_peak_at_chr3:179674518..179674534,+ | |||
|id=chr3:179674518..179674534,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.43e-33!52;CL:0000542!7.58e-33!53;CL:0000051!7.58e-33!53;CL:0000945!1.14e-22!24;CL:0000826!1.14e-22!24;CL:0000037!5.16e-16!172;CL:0000566!5.16e-16!172;CL:0002032!1.70e-15!165;CL:0000837!1.70e-15!165;CL:0002087!8.12e-15!119;CL:0000988!8.52e-15!182;CL:0000084!9.56e-15!25;CL:0000827!9.56e-15!25;CL:0002031!5.06e-14!124;CL:0000738!3.26e-13!140;CL:0000817!4.13e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.73e-21;25!CL:0000542;1.71e-18;53!CL:0000945;1.66e-16;24!CL:0002127;7.89e-13;1!CL:0000911;7.89e-13;1!CL:0000814;7.89e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.01e-34,52;CL:0000542,9.63e-34,53;CL:0000051,9.63e-34,53;CL:0000084,3.61e-21,25;CL:0000827,3.61e-21,25;CL:0000945,1.62e-16,24;CL:0000826,1.62e-16,24;CL:0000037,1.11e-14,168;CL:0002087,1.87e-14,115;CL:0000738,5.44e-14,136;CL:0000988,7.89e-14,177;CL:0002031,8.83e-14,120;CL:0002032,2.17e-13,161;CL:0000837,2.17e-13,161;CL:0002127,7.89e-13,1;CL:0000914,7.89e-13,1;CL:0000911,7.89e-13,1;CL:0000814,7.89e-13,1;CL:0002042,7.89e-13,1;CL:0002039,7.89e-13,1;CL:0002040,7.89e-13,1;CL:0002041,7.89e-13,1;CL:0000893,4.83e-07,2;CL:0002489,4.83e-07,2;CL:0000809,4.83e-07,2;CL:0000808,4.83e-07,2;CL:0000894,4.83e-07,2;CL:0000806,4.83e-07,2;CL:0000807,4.83e-07,2;CL:0000805,4.83e-07,2;CL:0002425,4.83e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000051;1.71e-18;53!CL:0002425;4.83e-07;2 | |||
|ontology_enrichment_disease=DOID:2531!7.10e-34!51;DOID:0060083!7.10e-34!51;DOID:0060058!1.64e-23!10;DOID:1240!2.16e-18!39;DOID:74!7.73e-11!2;DOID:0050686!1.25e-09!137 | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.37e-27;10!DOID:2531;2.12e-19;51!DOID:0060083;2.12e-19;51!DOID:4960;7.03e-13;1!DOID:0070004;7.03e-13;1!DOID:2355;1.18e-12;1!DOID:0060060;4.31e-12;1!DOID:0060061;4.31e-12;1!DOID:8691;4.31e-12;1!DOID:1240;7.50e-11;39!DOID:74;5.90e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.63e-29,51;DOID:0060083,1.63e-29,51;DOID:0060058,1.30e-27,10;DOID:1240,2.89e-13,39;DOID:4960,7.03e-13,1;DOID:0070004,7.03e-13,1;DOID:2355,1.11e-12,1;DOID:0060060,3.85e-12,1;DOID:0060061,3.85e-12,1;DOID:8691,3.85e-12,1;DOID:0050686,7.35e-10,137;DOID:74,5.73e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.48e-17!7;UBERON:0002370!4.41e-12!4;UBERON:0005058!4.41e-12!4;UBERON:0009113!4.41e-12!4;UBERON:0003295!4.41e-12!4;UBERON:0005562!4.41e-12!4;UBERON:0003408!3.17e-08!10;UBERON:0003351!3.40e-08!6;UBERON:0009722!2.35e-07!11;UBERON:0007690!2.35e-07!11;UBERON:0002106!4.69e-07!3;UBERON:0004854!4.69e-07!3;UBERON:0009034!4.69e-07!3;UBERON:0002095!4.69e-07!3;UBERON:0004782!4.69e-07!3;UBERON:0003281!4.69e-07!3;UBERON:0009664!4.69e-07!3;UBERON:0002296!4.69e-07!3;UBERON:0005602!4.69e-07!3;UBERON:0001179!4.69e-07!3;UBERON:0006293!4.69e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.55e-23;2!UBERON:0005058;8.55e-23;2!UBERON:0009113;8.55e-23;2!UBERON:0004177;1.06e-09;5!UBERON:0005057;1.06e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.54e-25,4;UBERON:0005058,1.54e-25,4;UBERON:0009113,1.54e-25,4;UBERON:0003295,1.54e-25,4;UBERON:0005562,1.54e-25,4;UBERON:0003351,2.97e-17,6;UBERON:0004177,7.03e-15,7;UBERON:0005057,7.03e-15,7;UBERON:0000974,1.37e-10,10;UBERON:0003408,1.37e-10,10;UBERON:0001042,1.37e-10,10;UBERON:0009145,1.37e-10,10;UBERON:0006562,1.12e-09,11;UBERON:0009722,1.12e-09,11;UBERON:0007690,1.12e-09,11 | |||
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|short_description=p@chr3:179674518..179674534,+ | |||
}} |
Revision as of 22:52, 12 September 2013
Short description: | p@chr3:179674518..179674534, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:179674518..179674534, + |
Coexpression cluster: | C116_myeloma_xeroderma_tonsil_CD19_spleen_lymph_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.54e-25 | 4 |
hemolymphoid system gland | 1.54e-25 | 4 |
thymic region | 1.54e-25 | 4 |
pharyngeal gland | 1.54e-25 | 4 |
thymus primordium | 1.54e-25 | 4 |
pharyngeal epithelium | 2.97e-17 | 6 |
hemopoietic organ | 7.03e-15 | 7 |
immune organ | 7.03e-15 | 7 |
neck | 1.37e-10 | 10 |
gland of gut | 1.37e-10 | 10 |
chordate pharynx | 1.37e-10 | 10 |
pharyngeal region of foregut | 1.37e-10 | 10 |
pharynx | 1.12e-09 | 11 |
entire pharyngeal arch endoderm | 1.12e-09 | 11 |
early pharyngeal endoderm | 1.12e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.63e-29 | 51 |
immune system cancer | 1.63e-29 | 51 |
lymphoma | 1.30e-27 | 10 |
leukemia | 2.89e-13 | 39 |
bone marrow cancer | 7.03e-13 | 1 |
myeloma | 7.03e-13 | 1 |
anemia | 1.11e-12 | 1 |
non-Hodgkin lymphoma | 3.85e-12 | 1 |
cutaneous T cell lymphoma | 3.85e-12 | 1 |
mycosis fungoides | 3.85e-12 | 1 |
organ system cancer | 7.35e-10 | 137 |
hematopoietic system disease | 5.73e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.