FFCP PHASE1:Hg19::chr3:98531239..98531265,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=131566|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24627|TSSclassifier=S|UniProt=|association_with_transcript=62bp_to_ENST00000494614_5end|coexpression_cluster_id=C504|description=CAGE_peak_12_at_DCBLD2_5end|id=chr3:98531239..98531265,-|ontology_enrichment_celltype=CL:0002321!5.33e-15!248;CL:0000220!1.06e-14!246;CL:0000055!1.27e-13!180;CL:0000680!2.36e-10!57;CL:0000056!2.36e-10!57;CL:0000355!2.36e-10!57;CL:0000359!3.76e-09!32;CL:0000187!7.49e-09!54;CL:0000548!1.31e-08!679;CL:0000004!1.31e-08!679;CL:0000255!1.31e-08!679;CL:0000192!1.49e-08!42;CL:0000514!1.49e-08!42;CL:0000012!3.24e-08!682;CL:0000393!6.32e-08!60;CL:0000211!6.32e-08!60;CL:0000183!1.21e-07!59;CL:0002539!4.99e-07!10|ontology_enrichment_celltype_v019=CL:0002595;1.10e-10;5!CL:0000056;2.40e-08;4!CL:0000064;8.14e-08;3!CL:0000067;8.14e-08;3!CL:0005012;8.14e-08;3!CL:0002304;8.14e-08;3!CL:0000359;1.45e-07;32!CL:0000048;4.68e-07;58!CL:0000134;7.38e-07;55|ontology_enrichment_celltype_v019_2=CL:0002595,7.71e-11,5;CL:0000515,6.60e-09,4;CL:0000359,5.51e-08,32;CL:0000064,8.92e-08,3;CL:0000067,8.92e-08,3;CL:0005012,8.92e-08,3;CL:0002304,8.92e-08,3;CL:0002539,5.68e-07,10|ontology_enrichment_development_v019=CL:0000515;2.40e-08;4|ontology_enrichment_disease=DOID:120!2.69e-09!27;DOID:193!2.89e-09!29;DOID:2394!1.33e-08!14|ontology_enrichment_disease_v019=DOID:2394;2.27e-17;14!DOID:193;1.63e-15;29!DOID:120;9.81e-15;27!DOID:0060072;5.96e-10;4!DOID:0060084;5.20e-08;3!DOID:127;5.20e-08;3|ontology_enrichment_disease_v019_2=DOID:2394,2.45e-17,14;DOID:193,1.91e-15,29;DOID:120,1.04e-14,27;DOID:0060072,6.21e-10,4;DOID:0060084,4.88e-08,3;DOID:127,4.88e-08,3|ontology_enrichment_uberon=UBERON:0005256!9.51e-11!143;UBERON:0000486!1.73e-09!82;UBERON:0004290!3.84e-09!70;UBERON:0000119!6.44e-09!312;UBERON:0000483!6.98e-09!309;UBERON:0001134!9.70e-09!61;UBERON:0002036!9.70e-09!61;UBERON:0003082!9.70e-09!61;UBERON:0002100!9.87e-09!216;UBERON:0002385!1.63e-08!63;UBERON:0001015!1.63e-08!63;UBERON:0000383!1.63e-08!63;UBERON:0000490!1.69e-08!138;UBERON:0000475!1.80e-08!365;UBERON:0001637!3.32e-08!42;UBERON:0003509!3.32e-08!42;UBERON:0004572!3.32e-08!42;UBERON:0000914!1.26e-07!83;UBERON:0002329!1.26e-07!83;UBERON:0003077!1.26e-07!83;UBERON:0003059!1.26e-07!83;UBERON:0007282!1.26e-07!83;UBERON:0009618!1.26e-07!83;UBERON:0007285!1.26e-07!83;UBERON:0004573!3.37e-07!33;UBERON:0004571!3.37e-07!33;UBERON:0004237!4.99e-07!10;UBERON:0004695!4.99e-07!10;UBERON:0002111!4.99e-07!10;UBERON:0004178!4.99e-07!10;UBERON:0001135!7.79e-07!15;UBERON:0003914!9.26e-07!118|ontology_enrichment_uberon_v019=UBERON:0007625;1.78e-11;11!UBERON:0003834;1.10e-10;5!UBERON:0001533;1.10e-10;5!UBERON:0000992;9.27e-10;13!UBERON:0000488;9.27e-10;4!UBERON:0004573;9.04e-09;33!UBERON:0004571;9.04e-09;33!UBERON:0001778;8.14e-08;3!UBERON:0001775;8.14e-08;3!UBERON:0003513;1.69e-07;7!UBERON:0003134;2.53e-07;33!UBERON:0002118;4.58e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0007625,1.16e-11,11;UBERON:0003834,7.71e-11,5;UBERON:0001533,7.71e-11,5;UBERON:0004573,1.91e-10,33;UBERON:0004571,1.91e-10,33;UBERON:0000488,8.46e-10,4;UBERON:0000992,9.79e-10,13;UBERON:0001637,1.61e-08,42;UBERON:0003509,1.61e-08,42;UBERON:0004572,1.61e-08,42;UBERON:0001778,8.92e-08,3;UBERON:0001775,8.92e-08,3;UBERON:0003513,1.33e-07,7;UBERON:0003134,3.74e-07,37;UBERON:0000474,3.74e-07,37;UBERON:0004237,5.68e-07,10;UBERON:0004695,5.68e-07,10;UBERON:0002111,5.68e-07,10;UBERON:0004178,5.68e-07,10;UBERON:0002118,6.46e-07,5|phase1_expression=0.54503513781167,0.856402095563933,0.140954404095971,0,0,0.872338524100369,0,0.631719873426831,0,0,0,0.218441372130172,0,0.495065411840187,0,1.34465029290355,1.80808358407193,1.46062018077475,0.487932798790507,0,0.408001382488506,0,0.286235987131057,2.32686522623903,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0,3.11964896641424,2.66075276955077,3.51339142772504,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,1.51956613997496,0.529636723252875,1.43418310374407,1.41867352879343,0,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0.151357427644931,0.576175924479999,0,0.312160076830321,0,1.79338416662161,0.469737994575059,0.161872944368132,0.140450806702248,0,0.368502951935304,0.103325781175765,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0,0,0,0.453728732640084,0.717558542755448,0.427114777637135,0.423863802319124,1.50045548042201,0.309157587715317,0,0,0.675105328965065,0.0974370051611986,0.504867548488229,0.184099797284599,0,1.77504796258307,0.806016785821122,0,0,0.545492241181669,0.573609190778008,0.365921118388786,0.132529768321485,0,0.310983165046111,0,0,0,1.28648187638577,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=131566 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24627 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=62bp_to_ENST00000494614_5end | |||
|coexpression_cluster_id=C504 | |||
|description=CAGE_peak_12_at_DCBLD2_5end | |||
|id=chr3:98531239..98531265,- | |||
|ontology_enrichment_celltype=CL:0002321!5.33e-15!248;CL:0000220!1.06e-14!246;CL:0000055!1.27e-13!180;CL:0000680!2.36e-10!57;CL:0000056!2.36e-10!57;CL:0000355!2.36e-10!57;CL:0000359!3.76e-09!32;CL:0000187!7.49e-09!54;CL:0000548!1.31e-08!679;CL:0000004!1.31e-08!679;CL:0000255!1.31e-08!679;CL:0000192!1.49e-08!42;CL:0000514!1.49e-08!42;CL:0000012!3.24e-08!682;CL:0000393!6.32e-08!60;CL:0000211!6.32e-08!60;CL:0000183!1.21e-07!59;CL:0002539!4.99e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0002595;1.10e-10;5!CL:0000056;2.40e-08;4!CL:0000064;8.14e-08;3!CL:0000067;8.14e-08;3!CL:0005012;8.14e-08;3!CL:0002304;8.14e-08;3!CL:0000359;1.45e-07;32!CL:0000048;4.68e-07;58!CL:0000134;7.38e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002595,7.71e-11,5;CL:0000515,6.60e-09,4;CL:0000359,5.51e-08,32;CL:0000064,8.92e-08,3;CL:0000067,8.92e-08,3;CL:0005012,8.92e-08,3;CL:0002304,8.92e-08,3;CL:0002539,5.68e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000515;2.40e-08;4 | |||
|ontology_enrichment_disease=DOID:120!2.69e-09!27;DOID:193!2.89e-09!29;DOID:2394!1.33e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.27e-17;14!DOID:193;1.63e-15;29!DOID:120;9.81e-15;27!DOID:0060072;5.96e-10;4!DOID:0060084;5.20e-08;3!DOID:127;5.20e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.45e-17,14;DOID:193,1.91e-15,29;DOID:120,1.04e-14,27;DOID:0060072,6.21e-10,4;DOID:0060084,4.88e-08,3;DOID:127,4.88e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0005256!9.51e-11!143;UBERON:0000486!1.73e-09!82;UBERON:0004290!3.84e-09!70;UBERON:0000119!6.44e-09!312;UBERON:0000483!6.98e-09!309;UBERON:0001134!9.70e-09!61;UBERON:0002036!9.70e-09!61;UBERON:0003082!9.70e-09!61;UBERON:0002100!9.87e-09!216;UBERON:0002385!1.63e-08!63;UBERON:0001015!1.63e-08!63;UBERON:0000383!1.63e-08!63;UBERON:0000490!1.69e-08!138;UBERON:0000475!1.80e-08!365;UBERON:0001637!3.32e-08!42;UBERON:0003509!3.32e-08!42;UBERON:0004572!3.32e-08!42;UBERON:0000914!1.26e-07!83;UBERON:0002329!1.26e-07!83;UBERON:0003077!1.26e-07!83;UBERON:0003059!1.26e-07!83;UBERON:0007282!1.26e-07!83;UBERON:0009618!1.26e-07!83;UBERON:0007285!1.26e-07!83;UBERON:0004573!3.37e-07!33;UBERON:0004571!3.37e-07!33;UBERON:0004237!4.99e-07!10;UBERON:0004695!4.99e-07!10;UBERON:0002111!4.99e-07!10;UBERON:0004178!4.99e-07!10;UBERON:0001135!7.79e-07!15;UBERON:0003914!9.26e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;1.78e-11;11!UBERON:0003834;1.10e-10;5!UBERON:0001533;1.10e-10;5!UBERON:0000992;9.27e-10;13!UBERON:0000488;9.27e-10;4!UBERON:0004573;9.04e-09;33!UBERON:0004571;9.04e-09;33!UBERON:0001778;8.14e-08;3!UBERON:0001775;8.14e-08;3!UBERON:0003513;1.69e-07;7!UBERON:0003134;2.53e-07;33!UBERON:0002118;4.58e-07;5 | |||
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| |||
|short_description=p12@DCBLD2 | |||
}} |
Revision as of 01:40, 13 September 2013
Short description: | p12@DCBLD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_DCBLD2_5end |
Coexpression cluster: | C504_leiomyoma_Lens_Ciliary_mesenchymal_Smooth_Mesothelial_Renal |
Association with transcript: | 62bp_to_ENST00000494614_5end |
EntrezGene: | DCBLD2 |
HGNC: | 24627 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the subclavian artery | 7.71e-11 | 5 |
skeletal muscle myoblast | 6.60e-09 | 4 |
vascular associated smooth muscle cell | 5.51e-08 | 32 |
ciliated cell | 8.92e-08 | 3 |
ciliated epithelial cell | 8.92e-08 | 3 |
multi-ciliated epithelial cell | 8.92e-08 | 3 |
non-pigmented ciliary epithelial cell | 8.92e-08 | 3 |
aortic smooth muscle cell | 5.68e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 1.16e-11 | 11 |
thoracic segment blood vessel | 7.71e-11 | 5 |
subclavian artery | 7.71e-11 | 5 |
systemic artery | 1.91e-10 | 33 |
systemic arterial system | 1.91e-10 | 33 |
atypical epithelium | 8.46e-10 | 4 |
female gonad | 9.79e-10 | 13 |
artery | 1.61e-08 | 42 |
arterial blood vessel | 1.61e-08 | 42 |
arterial system | 1.61e-08 | 42 |
ciliary epithelium | 8.92e-08 | 3 |
ciliary body | 8.92e-08 | 3 |
trunk blood vessel | 1.33e-07 | 7 |
female reproductive organ | 3.74e-07 | 37 |
female reproductive system | 3.74e-07 | 37 |
blood vessel smooth muscle | 5.68e-07 | 10 |
arterial system smooth muscle | 5.68e-07 | 10 |
artery smooth muscle tissue | 5.68e-07 | 10 |
aorta smooth muscle tissue | 5.68e-07 | 10 |
right ovary | 6.46e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.45e-17 | 14 |
reproductive organ cancer | 1.91e-15 | 29 |
female reproductive organ cancer | 1.04e-14 | 27 |
benign neoplasm | 6.21e-10 | 4 |
cell type benign neoplasm | 4.88e-08 | 3 |
leiomyoma | 4.88e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.