FFCP PHASE1:Hg19::chr4:129201505..129201507,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:129201505..129201507,-|id=chr4:129201505..129201507,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000624;5.18e-09;6|ontology_enrichment_celltype_v019_2=CL:0000624,3.01e-09,6|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:17;2.28e-07;5!DOID:450;2.28e-07;5!DOID:66;2.28e-07;5!DOID:423;2.28e-07;5!DOID:0080000;2.28e-07;5!DOID:11722;2.28e-07;5|ontology_enrichment_disease_v019_2=DOID:17,6.08e-07,5;DOID:450,6.08e-07,5;DOID:66,6.08e-07,5;DOID:423,6.08e-07,5;DOID:0080000,6.08e-07,5;DOID:11722,6.08e-07,5|ontology_enrichment_uberon=UBERON:0002780!7.77e-09!41;UBERON:0001890!7.77e-09!41;UBERON:0006240!7.77e-09!41;UBERON:0002020!2.66e-08!34;UBERON:0003528!2.66e-08!34;UBERON:0003080!3.19e-08!42;UBERON:0001049!1.05e-07!57;UBERON:0005068!1.05e-07!57;UBERON:0006241!1.05e-07!57;UBERON:0007135!1.05e-07!57;UBERON:0001893!1.33e-07!34;UBERON:0002791!1.54e-07!33;UBERON:0001869!4.88e-07!32|ontology_enrichment_uberon_v019=UBERON:0003528;7.06e-07;34!UBERON:0002020;7.06e-07;34|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.94e-08,56;UBERON:0005068,1.94e-08,56;UBERON:0006241,1.94e-08,56;UBERON:0007135,1.94e-08,56;UBERON:0000073,2.02e-08,53;UBERON:0002616,2.02e-08,53;UBERON:0003528,2.83e-08,34;UBERON:0002020,2.83e-08,34;UBERON:0003075,1.37e-07,82;UBERON:0007284,1.37e-07,82;UBERON:0002346,1.64e-07,86;UBERON:0002780,3.15e-07,41;UBERON:0001890,3.15e-07,41;UBERON:0003080,3.15e-07,41;UBERON:0006240,3.15e-07,41;UBERON:0002791,7.96e-07,32|phase1_expression=0.908391896352783,1.07050261945492,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0,0,0.245733936501509,0.697801167972428,0.436882744260345,0.527533956456907,0.123766352960047,0,0,0,0,0,0,0,0,0.85870796139317,0.958120975510189,1.25542639594803,0.764134057479513,1.14940825229924,1.33808328233255,0.786728553697808,1.15148819429164,0.154816123316076,0,0,0,0.46480320348181,0.426507697462265,0.880801318004542,0,0.200544447470142,1.51907609501096,0.895661896959697,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0.605399502633369,0.368277635987565,0,0,0.212604299965044,1.04829322754188,0.112328631146495,0.750884464207532,0.32145117339416,0.285012743741249,0.19891667719909,0.730656615058536,0,0,0.889509253863555,0.426730222566507,0,0.574752439954483,0.661044872784862,0,1.70763890732835,0,1.52909291250092,0,0,0.526768169550154,3.540775862049,2.75107533924415,3.90642848099067,0.167186495390678,1.62961133316795,2.8406868344084,1.94826728407911,0.334231370655521,1.47302953737419,0.664601683750863,0.270803863765016,0.128091319725675,0.390178042679635,0.986627427622057,0.276350017785848,0.579606171470105,1.77943875794473,1.07016331235885,2.09071047609954,0.679856056185397,1.14966148080576,1.37450978193052,1.26509846009751,0.637130828648193,0,0,0,0.255973222308837,0,0.236777252044017,0,1.41124720257313,1.87208137048455,4.92402973201517,0,0,0.255725123687061,0,0.50133791063589,0.724232594804119,0,0.973269740605272,0.567208902984407,1.99556457716308,0.702678285545008,0.589405839739707,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0.516833518338658,0.71153252537342,1.00416183829401,0,0.760272105718513,1.22031028774085,0,0,0.714397826272638,0.22452937262617,0.225222960966644,0,0,0,0,0,0.436094052142534,0.496971951695318,0.379891534993739,2.78059279707759,0.860509862246441,0,0,1.06748995729705,0,0,0.67355336034844,0.490385709340376,0,0,0.937285727335186,0.312160076830321,0.570471821544449,0,0.704606991862589,0,0.421352420106746,0.204154171254893,0.368502951935304,1.65321249881225,2.37600571456411,0.247266929278557,0,0,0.673344455816265,0.750711119231785,0.277064115484183,0.877955241761676,0,0.751190294532984,0.113432183160021,2.51145489964407,1.06778694409284,1.48352330811693,2.40072876867522,1.03052529238439,0.515281080091258,0.744467425326359,1.68776332241266,0.487185025805993,1.26216887122057,1.19664868234989,0.80823028409406,0,0.403008392910561,0.339121184620975,0.193260853163297,1.09098448236334,0.573609190778008,0.121973706129595,0.397589304964456,0.348581828608555,0.310983165046111,0.756962552626885,1.82488679537915,0,0.643240938192885,0,0,0,0.354920400119532,0.505754070234305,0.482022059766964,0.661763836394364,0.435758888184812,0,0.404493924480493,0.196221465125346,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,2.36315962672562,0.441463099414651,0,0.171567810298526,0,0,0.201057944823262,0.185176890317059,0,0,2.88662684050547,1.04337364477569,0.117408694235822,0.866198686566443,0.925971025153221,1.52203321787679,0,0.858486162094873,0.492434012174795,0.468008530278475,0.891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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:129201505..129201507,- | |||
|id=chr4:129201505..129201507,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000624;5.18e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,3.01e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.28e-07;5!DOID:450;2.28e-07;5!DOID:66;2.28e-07;5!DOID:423;2.28e-07;5!DOID:0080000;2.28e-07;5!DOID:11722;2.28e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.08e-07,5;DOID:450,6.08e-07,5;DOID:66,6.08e-07,5;DOID:423,6.08e-07,5;DOID:0080000,6.08e-07,5;DOID:11722,6.08e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0002780!7.77e-09!41;UBERON:0001890!7.77e-09!41;UBERON:0006240!7.77e-09!41;UBERON:0002020!2.66e-08!34;UBERON:0003528!2.66e-08!34;UBERON:0003080!3.19e-08!42;UBERON:0001049!1.05e-07!57;UBERON:0005068!1.05e-07!57;UBERON:0006241!1.05e-07!57;UBERON:0007135!1.05e-07!57;UBERON:0001893!1.33e-07!34;UBERON:0002791!1.54e-07!33;UBERON:0001869!4.88e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;7.06e-07;34!UBERON:0002020;7.06e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.94e-08,56;UBERON:0005068,1.94e-08,56;UBERON:0006241,1.94e-08,56;UBERON:0007135,1.94e-08,56;UBERON:0000073,2.02e-08,53;UBERON:0002616,2.02e-08,53;UBERON:0003528,2.83e-08,34;UBERON:0002020,2.83e-08,34;UBERON:0003075,1.37e-07,82;UBERON:0007284,1.37e-07,82;UBERON:0002346,1.64e-07,86;UBERON:0002780,3.15e-07,41;UBERON:0001890,3.15e-07,41;UBERON:0003080,3.15e-07,41;UBERON:0006240,3.15e-07,41;UBERON:0002791,7.96e-07,32 | |||
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| |||
|short_description=p@chr4:129201505..129201507,- | |||
}} |
Revision as of 02:22, 13 September 2013
Short description: | p@chr4:129201505..129201507, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:129201505..129201507, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 3.01e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.94e-08 | 56 |
neural rod | 1.94e-08 | 56 |
future spinal cord | 1.94e-08 | 56 |
neural keel | 1.94e-08 | 56 |
regional part of nervous system | 2.02e-08 | 53 |
regional part of brain | 2.02e-08 | 53 |
brain grey matter | 2.83e-08 | 34 |
gray matter | 2.83e-08 | 34 |
neural plate | 1.37e-07 | 82 |
presumptive neural plate | 1.37e-07 | 82 |
neurectoderm | 1.64e-07 | 86 |
regional part of forebrain | 3.15e-07 | 41 |
forebrain | 3.15e-07 | 41 |
anterior neural tube | 3.15e-07 | 41 |
future forebrain | 3.15e-07 | 41 |
regional part of telencephalon | 7.96e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.08e-07 | 5 |
myotonic disease | 6.08e-07 | 5 |
muscle tissue disease | 6.08e-07 | 5 |
myopathy | 6.08e-07 | 5 |
muscular disease | 6.08e-07 | 5 |
myotonic dystrophy | 6.08e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.