FFCP PHASE1:Hg19::chr5:43042466..43042488,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3713|description=CAGE_peak_at_chr5:43042466..43042488,-|id=chr5:43042466..43042488,-|ontology_enrichment_celltype=CL:0000738!2.95e-60!140;CL:0000037!1.68e-59!172;CL:0000566!1.68e-59!172;CL:0000988!1.31e-54!182;CL:0002032!1.84e-53!165;CL:0000837!1.84e-53!165;CL:0002087!3.16e-50!119;CL:0002031!2.42e-49!124;CL:0000763!2.75e-27!112;CL:0000049!2.75e-27!112;CL:0000557!1.88e-26!71;CL:0000766!2.99e-26!76;CL:0002057!4.45e-25!42;CL:0000860!1.07e-24!45;CL:0000542!2.12e-24!53;CL:0000051!2.12e-24!53;CL:0000838!8.36e-24!52;CL:0002009!1.49e-23!65;CL:0000839!5.06e-23!70;CL:0002194!2.71e-22!63;CL:0000576!2.71e-22!63;CL:0000040!2.71e-22!63;CL:0000559!2.71e-22!63;CL:0002320!1.05e-19!365;CL:0000134!1.35e-19!358;CL:0000219!8.42e-17!390;CL:0000791!2.52e-15!18;CL:0000789!2.52e-15!18;CL:0002420!2.52e-15!18;CL:0002419!2.52e-15!18;CL:0000790!2.52e-15!18;CL:0000084!5.70e-15!25;CL:0000827!5.70e-15!25;CL:0000236!3.00e-10!14;CL:0000625!5.08e-10!11;CL:0000034!2.95e-09!444;CL:0002393!3.41e-09!9;CL:0002397!3.41e-09!9;CL:0000048!4.11e-09!430;CL:0000723!9.27e-09!436;CL:0000945!5.61e-08!24;CL:0000826!5.61e-08!24|ontology_enrichment_celltype_v019=CL:0000791;6.95e-22;18!CL:0000789;6.95e-22;18!CL:0002419;6.95e-22;18!CL:0000576;6.32e-19;48!CL:0002087;1.04e-18;104!CL:0000860;3.33e-17;33!CL:0002057;3.33e-17;33!CL:0000766;1.26e-16;69!CL:0000236;1.52e-16;13!CL:0000542;4.58e-16;53!CL:0000625;4.28e-15;11!CL:0000084;9.92e-15;25!CL:0002393;4.34e-14;6!CL:0002397;4.34e-14;6!CL:0000473;3.24e-13;39!CL:0000234;3.24e-13;39!CL:0000738;5.85e-12;136!CL:0000624;6.14e-10;6!CL:0000988;7.88e-10;177!CL:0000623;1.21e-08;3!CL:0000767;1.58e-08;3!CL:0000763;2.76e-08;100!CL:0000784;6.03e-08;3!CL:0000945;6.27e-08;24!CL:0000226;1.95e-07;3!CL:0000842;1.95e-07;3!CL:0000219;3.71e-07;193!CL:0000875;4.28e-07;3!CL:0002396;4.28e-07;3|ontology_enrichment_celltype_v019_2=CL:0000738,2.55e-68,136;CL:0000037,1.26e-59,168;CL:0002087,1.11e-57,115;CL:0002031,3.04e-57,120;CL:0000988,1.16e-55,177;CL:0002032,5.35e-51,161;CL:0000837,5.35e-51,161;CL:0000766,8.56e-34,72;CL:0000860,1.33e-32,42;CL:0002057,1.33e-32,42;CL:0000557,3.53e-32,67;CL:0000473,1.09e-29,48;CL:0000234,1.09e-29,48;CL:0000839,1.52e-28,66;CL:0002009,7.04e-27,61;CL:0002194,4.05e-26,59;CL:0000576,4.05e-26,59;CL:0000040,4.05e-26,59;CL:0000559,4.05e-26,59;CL:0000838,4.83e-26,52;CL:0000542,2.12e-25,53;CL:0000051,2.12e-25,53;CL:0000763,1.59e-24,108;CL:0000049,1.59e-24,108;CL:0000791,5.09e-22,18;CL:0000789,5.09e-22,18;CL:0002420,5.09e-22,18;CL:0002419,5.09e-22,18;CL:0000790,5.09e-22,18;CL:0002393,8.42e-20,9;CL:0002397,8.42e-20,9;CL:0000134,1.36e-18,354;CL:0002320,7.05e-18,361;CL:0000236,1.65e-15,14;CL:0000219,2.30e-15,386;CL:0000625,3.40e-15,11;CL:0000084,8.00e-15,25;CL:0000827,8.00e-15,25;CL:0000034,1.51e-13,441;CL:0000048,2.61e-12,427;CL:0000723,6.85e-12,433;CL:0000624,5.56e-10,6;CL:0000623,1.17e-08,3;CL:0000825,1.17e-08,3;CL:0000767,1.53e-08,3;CL:0000945,4.28e-08,24;CL:0000826,4.28e-08,24;CL:0000784,6.57e-08,3;CL:0000226,2.47e-07,3;CL:0000842,2.47e-07,3;CL:0000875,2.53e-07,3;CL:0002396,2.53e-07,3|ontology_enrichment_development_v019=CL:0002057;1.39e-22;42!CL:0000790;6.95e-22;18!CL:0000051;4.58e-16;53!CL:0000049;1.28e-07;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.13e-27!102;UBERON:0003061!9.13e-27!102;UBERON:0001474!6.36e-25!86;UBERON:0002371!1.44e-24!80;UBERON:0002193!6.65e-23!112;UBERON:0002384!7.62e-20!375;UBERON:0004765!2.98e-19!101;UBERON:0001434!2.98e-19!101;UBERON:0002405!2.25e-16!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.77e-29,76;UBERON:0002390,3.05e-28,98;UBERON:0003061,3.05e-28,98;UBERON:0001474,2.09e-26,82;UBERON:0002193,1.42e-24,108;UBERON:0002405,9.26e-24,93;UBERON:0004765,3.59e-23,90;UBERON:0001434,7.25e-20,100;UBERON:0002384,6.66e-17,371;UBERON:0002204,3.31e-08,167;UBERON:0003081,3.79e-08,203|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0.0821005894499457,0,15.7345710739562,4.98978217526377,5.10893206943051,0,0,0,0,0.142169232487422,12.0376180127287,5.53995408531877,4.61252229181326,7.37836960433896,0,0,0,0.436194716338694,1.13362783106643,0.242584061187816,0.464858073811369,0,0.619412741790207,1.43846196161075,0.768482119587302,1.89185783910868,1.37898272294647,1.29096936716765,0,0.564727018627814,0,0.224723484445085,3.67300670845083,0.962787081228281,1.27867425159808,0.659702600373432,1.19678194572979,2.55734850319616,1.16083695451434,1.13477044938228,0.622822248995575,1.7587406567972,1.0429658368404,3.04064382587163,1.21079900526674,0.368277635987565,1.26584954976354,1.47878700418359,2.33864729961548,3.77385561915077,2.13424399178341,2.10247649978109,1.44653028027372,3.99017841237748,1.7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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3713 | |||
|description=CAGE_peak_at_chr5:43042466..43042488,- | |||
|id=chr5:43042466..43042488,- | |||
|ontology_enrichment_celltype=CL:0000738!2.95e-60!140;CL:0000037!1.68e-59!172;CL:0000566!1.68e-59!172;CL:0000988!1.31e-54!182;CL:0002032!1.84e-53!165;CL:0000837!1.84e-53!165;CL:0002087!3.16e-50!119;CL:0002031!2.42e-49!124;CL:0000763!2.75e-27!112;CL:0000049!2.75e-27!112;CL:0000557!1.88e-26!71;CL:0000766!2.99e-26!76;CL:0002057!4.45e-25!42;CL:0000860!1.07e-24!45;CL:0000542!2.12e-24!53;CL:0000051!2.12e-24!53;CL:0000838!8.36e-24!52;CL:0002009!1.49e-23!65;CL:0000839!5.06e-23!70;CL:0002194!2.71e-22!63;CL:0000576!2.71e-22!63;CL:0000040!2.71e-22!63;CL:0000559!2.71e-22!63;CL:0002320!1.05e-19!365;CL:0000134!1.35e-19!358;CL:0000219!8.42e-17!390;CL:0000791!2.52e-15!18;CL:0000789!2.52e-15!18;CL:0002420!2.52e-15!18;CL:0002419!2.52e-15!18;CL:0000790!2.52e-15!18;CL:0000084!5.70e-15!25;CL:0000827!5.70e-15!25;CL:0000236!3.00e-10!14;CL:0000625!5.08e-10!11;CL:0000034!2.95e-09!444;CL:0002393!3.41e-09!9;CL:0002397!3.41e-09!9;CL:0000048!4.11e-09!430;CL:0000723!9.27e-09!436;CL:0000945!5.61e-08!24;CL:0000826!5.61e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.95e-22;18!CL:0000789;6.95e-22;18!CL:0002419;6.95e-22;18!CL:0000576;6.32e-19;48!CL:0002087;1.04e-18;104!CL:0000860;3.33e-17;33!CL:0002057;3.33e-17;33!CL:0000766;1.26e-16;69!CL:0000236;1.52e-16;13!CL:0000542;4.58e-16;53!CL:0000625;4.28e-15;11!CL:0000084;9.92e-15;25!CL:0002393;4.34e-14;6!CL:0002397;4.34e-14;6!CL:0000473;3.24e-13;39!CL:0000234;3.24e-13;39!CL:0000738;5.85e-12;136!CL:0000624;6.14e-10;6!CL:0000988;7.88e-10;177!CL:0000623;1.21e-08;3!CL:0000767;1.58e-08;3!CL:0000763;2.76e-08;100!CL:0000784;6.03e-08;3!CL:0000945;6.27e-08;24!CL:0000226;1.95e-07;3!CL:0000842;1.95e-07;3!CL:0000219;3.71e-07;193!CL:0000875;4.28e-07;3!CL:0002396;4.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.55e-68,136;CL:0000037,1.26e-59,168;CL:0002087,1.11e-57,115;CL:0002031,3.04e-57,120;CL:0000988,1.16e-55,177;CL:0002032,5.35e-51,161;CL:0000837,5.35e-51,161;CL:0000766,8.56e-34,72;CL:0000860,1.33e-32,42;CL:0002057,1.33e-32,42;CL:0000557,3.53e-32,67;CL:0000473,1.09e-29,48;CL:0000234,1.09e-29,48;CL:0000839,1.52e-28,66;CL:0002009,7.04e-27,61;CL:0002194,4.05e-26,59;CL:0000576,4.05e-26,59;CL:0000040,4.05e-26,59;CL:0000559,4.05e-26,59;CL:0000838,4.83e-26,52;CL:0000542,2.12e-25,53;CL:0000051,2.12e-25,53;CL:0000763,1.59e-24,108;CL:0000049,1.59e-24,108;CL:0000791,5.09e-22,18;CL:0000789,5.09e-22,18;CL:0002420,5.09e-22,18;CL:0002419,5.09e-22,18;CL:0000790,5.09e-22,18;CL:0002393,8.42e-20,9;CL:0002397,8.42e-20,9;CL:0000134,1.36e-18,354;CL:0002320,7.05e-18,361;CL:0000236,1.65e-15,14;CL:0000219,2.30e-15,386;CL:0000625,3.40e-15,11;CL:0000084,8.00e-15,25;CL:0000827,8.00e-15,25;CL:0000034,1.51e-13,441;CL:0000048,2.61e-12,427;CL:0000723,6.85e-12,433;CL:0000624,5.56e-10,6;CL:0000623,1.17e-08,3;CL:0000825,1.17e-08,3;CL:0000767,1.53e-08,3;CL:0000945,4.28e-08,24;CL:0000826,4.28e-08,24;CL:0000784,6.57e-08,3;CL:0000226,2.47e-07,3;CL:0000842,2.47e-07,3;CL:0000875,2.53e-07,3;CL:0002396,2.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.39e-22;42!CL:0000790;6.95e-22;18!CL:0000051;4.58e-16;53!CL:0000049;1.28e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.13e-27!102;UBERON:0003061!9.13e-27!102;UBERON:0001474!6.36e-25!86;UBERON:0002371!1.44e-24!80;UBERON:0002193!6.65e-23!112;UBERON:0002384!7.62e-20!375;UBERON:0004765!2.98e-19!101;UBERON:0001434!2.98e-19!101;UBERON:0002405!2.25e-16!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.77e-29,76;UBERON:0002390,3.05e-28,98;UBERON:0003061,3.05e-28,98;UBERON:0001474,2.09e-26,82;UBERON:0002193,1.42e-24,108;UBERON:0002405,9.26e-24,93;UBERON:0004765,3.59e-23,90;UBERON:0001434,7.25e-20,100;UBERON:0002384,6.66e-17,371;UBERON:0002204,3.31e-08,167;UBERON:0003081,3.79e-08,203 | |||
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| |||
|short_description=p@chr5:43042466..43042488,- | |||
}} |
Revision as of 15:44, 13 September 2013
Short description: | p@chr5:43042466..43042488, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:43042466..43042488, - |
Coexpression cluster: | C3713_CD34_Basophils_CD133_Natural_CD14_Dendritic_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.77e-29 | 76 |
hematopoietic system | 3.05e-28 | 98 |
blood island | 3.05e-28 | 98 |
bone element | 2.09e-26 | 82 |
hemolymphoid system | 1.42e-24 | 108 |
immune system | 9.26e-24 | 93 |
skeletal element | 3.59e-23 | 90 |
skeletal system | 7.25e-20 | 100 |
connective tissue | 6.66e-17 | 371 |
musculoskeletal system | 3.31e-08 | 167 |
lateral plate mesoderm | 3.79e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.