FFCP PHASE1:Hg19::chr7:95225490..95225542,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5166|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8812|TSSclassifier=W|UniProt=|association_with_transcript=229bp_to_ENST00000473301_5end|coexpression_cluster_id=C538|description=CAGE_peak_3_at_PDK4_5end|id=chr7:95225490..95225542,-|ontology_enrichment_celltype=CL:0000136!2.60e-10!15|ontology_enrichment_celltype_v019=CL:0000136;2.74e-20;13!CL:0002615;5.13e-07;3|ontology_enrichment_celltype_v019_2=CL:0000136,4.40e-17,15;CL:0002615,5.06e-07,3|ontology_enrichment_development_v019=UBERON:0006603;9.45e-07;65|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.83e-54!115;UBERON:0001049!1.19e-19!57;UBERON:0005068!1.19e-19!57;UBERON:0006241!1.19e-19!57;UBERON:0007135!1.19e-19!57;UBERON:0003080!5.32e-17!42;UBERON:0002780!3.70e-16!41;UBERON:0001890!3.70e-16!41;UBERON:0006240!3.70e-16!41;UBERON:0002616!5.12e-15!59;UBERON:0003075!1.05e-13!86;UBERON:0007284!1.05e-13!86;UBERON:0002346!2.35e-12!90;UBERON:0002020!5.32e-12!34;UBERON:0003528!5.32e-12!34;UBERON:0001893!7.00e-12!34;UBERON:0001017!1.32e-11!82;UBERON:0002791!1.93e-11!33;UBERON:0000955!2.51e-11!69;UBERON:0006238!2.51e-11!69;UBERON:0005743!4.84e-11!86;UBERON:0001869!9.01e-11!32;UBERON:0000062!1.77e-10!511;UBERON:0000468!2.03e-09!659;UBERON:0000073!2.23e-09!94;UBERON:0001016!2.23e-09!94;UBERON:0003056!2.32e-09!61;UBERON:0000922!1.74e-08!612;UBERON:0002619!4.19e-08!22;UBERON:0002050!4.29e-08!605;UBERON:0005423!4.29e-08!605;UBERON:0000923!7.46e-08!604;UBERON:0005291!7.46e-08!604;UBERON:0006598!7.46e-08!604;UBERON:0002532!7.46e-08!604;UBERON:0000467!1.11e-07!625;UBERON:0000480!1.38e-07!626;UBERON:0000956!3.17e-07!25;UBERON:0000203!3.17e-07!25;UBERON:0000477!4.32e-07!286;UBERON:0001950!6.18e-07!20;UBERON:0002298!6.86e-07!8;UBERON:0002308!7.13e-07!9;UBERON:0000125!7.13e-07!9|ontology_enrichment_uberon_v019=UBERON:0007023;2.03e-14;114!UBERON:0006947;1.91e-07;3!UBERON:0004054;1.91e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.79e-56,114;UBERON:0001049,7.61e-09,56;UBERON:0005068,7.61e-09,56;UBERON:0006241,7.61e-09,56;UBERON:0007135,7.61e-09,56;UBERON:0000073,1.30e-07,53;UBERON:0002616,1.30e-07,53;UBERON:0002780,1.80e-07,41;UBERON:0001890,1.80e-07,41;UBERON:0003080,1.80e-07,41;UBERON:0006240,1.80e-07,41;UBERON:0006947,1.96e-07,3;UBERON:0004054,1.96e-07,3;UBERON:0003075,2.23e-07,82;UBERON:0007284,2.23e-07,82;UBERON:0011216,4.36e-07,223;UBERON:0010314,4.75e-07,132;UBERON:0002346,9.11e-07,86|phase1_expression=3.08853244759946,3.63970890614671,4.36958652697511,6.00439790118782,4.91657203870017,0.872338524100369,2.53299878168311,1.26343974685366,4.17897005119742,0,0,0,0,0.495065411840187,2.98257638155124,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,1.56740831967947,0.971680998056939,1.80302897343931,0.581592955118259,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0,0.150176892841506,0.32145117339416,0,0.59675003159727,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,9.75227465255847,0,0,0,0,1.15877215168659,0,0,0.0945348171640679,0,0,1.17881167947941,0,0,0,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570762456703795,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0,0.253991577168676,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,0,0,0.257207374262142,0,0,1.28680194292333,0.542621605391443,0,0,0.710783897485092,0,0,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0.64341568457443,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0.460511024178389,0,0.322260734604821,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0.65589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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5166 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8812 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=229bp_to_ENST00000473301_5end | |||
|coexpression_cluster_id=C538 | |||
|description=CAGE_peak_3_at_PDK4_5end | |||
|id=chr7:95225490..95225542,- | |||
|ontology_enrichment_celltype=CL:0000136!2.60e-10!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;2.74e-20;13!CL:0002615;5.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.40e-17,15;CL:0002615,5.06e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006603;9.45e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.83e-54!115;UBERON:0001049!1.19e-19!57;UBERON:0005068!1.19e-19!57;UBERON:0006241!1.19e-19!57;UBERON:0007135!1.19e-19!57;UBERON:0003080!5.32e-17!42;UBERON:0002780!3.70e-16!41;UBERON:0001890!3.70e-16!41;UBERON:0006240!3.70e-16!41;UBERON:0002616!5.12e-15!59;UBERON:0003075!1.05e-13!86;UBERON:0007284!1.05e-13!86;UBERON:0002346!2.35e-12!90;UBERON:0002020!5.32e-12!34;UBERON:0003528!5.32e-12!34;UBERON:0001893!7.00e-12!34;UBERON:0001017!1.32e-11!82;UBERON:0002791!1.93e-11!33;UBERON:0000955!2.51e-11!69;UBERON:0006238!2.51e-11!69;UBERON:0005743!4.84e-11!86;UBERON:0001869!9.01e-11!32;UBERON:0000062!1.77e-10!511;UBERON:0000468!2.03e-09!659;UBERON:0000073!2.23e-09!94;UBERON:0001016!2.23e-09!94;UBERON:0003056!2.32e-09!61;UBERON:0000922!1.74e-08!612;UBERON:0002619!4.19e-08!22;UBERON:0002050!4.29e-08!605;UBERON:0005423!4.29e-08!605;UBERON:0000923!7.46e-08!604;UBERON:0005291!7.46e-08!604;UBERON:0006598!7.46e-08!604;UBERON:0002532!7.46e-08!604;UBERON:0000467!1.11e-07!625;UBERON:0000480!1.38e-07!626;UBERON:0000956!3.17e-07!25;UBERON:0000203!3.17e-07!25;UBERON:0000477!4.32e-07!286;UBERON:0001950!6.18e-07!20;UBERON:0002298!6.86e-07!8;UBERON:0002308!7.13e-07!9;UBERON:0000125!7.13e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.03e-14;114!UBERON:0006947;1.91e-07;3!UBERON:0004054;1.91e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.79e-56,114;UBERON:0001049,7.61e-09,56;UBERON:0005068,7.61e-09,56;UBERON:0006241,7.61e-09,56;UBERON:0007135,7.61e-09,56;UBERON:0000073,1.30e-07,53;UBERON:0002616,1.30e-07,53;UBERON:0002780,1.80e-07,41;UBERON:0001890,1.80e-07,41;UBERON:0003080,1.80e-07,41;UBERON:0006240,1.80e-07,41;UBERON:0006947,1.96e-07,3;UBERON:0004054,1.96e-07,3;UBERON:0003075,2.23e-07,82;UBERON:0007284,2.23e-07,82;UBERON:0011216,4.36e-07,223;UBERON:0010314,4.75e-07,132;UBERON:0002346,9.11e-07,86 | |||
|phase1_expression=3.08853244759946,3.63970890614671,4.36958652697511,6.00439790118782,4.91657203870017,0.872338524100369,2.53299878168311,1.26343974685366,4.17897005119742,0,0,0,0,0.495065411840187,2.98257638155124,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,1.56740831967947,0.971680998056939,1.80302897343931,0.581592955118259,0.377875943688809,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0,0.150176892841506,0.32145117339416,0,0.59675003159727,0.365328307529268,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,9.75227465255847,0,0,0,0,1.15877215168659,0,0,0.0945348171640679,0,0,1.17881167947941,0,0,0,0.348259474598534,0,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,4.72631925345123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570762456703795,0,0,0.246217006087397,0,0.445893486866185,0,0,0,0,0,0,0,0,0.207328115540772,0.288239906833923,0,0.253991577168676,0.381988425558278,0,1.71072446022705,0.102827492703324,0,0.571652865261156,0,0,0,0,0,0,0,0,0.257207374262142,0,0,1.28680194292333,0.542621605391443,0,0,0.710783897485092,0,0,0.871533458600294,0.099972991182057,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0.280660094433074,0,0.511707249066704,0.64341568457443,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0.460511024178389,0,0.322260734604821,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.731140468893853,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,20.3646369187933,0,0,0,0,0,0,0,1.26602474769461,0,0,0.211125408127993,1.79323189425963,1.10513566212459,0.251932747854276,0,0,0,0,0,0,3.45251919729268,2.3948309234694,1.11136990144637,0,1.20598527610407,0,0,0,8.69999490521752,0,0.254253650292766,0,0,0,0,3.54296554325536,1.68835014075571,0,0.331737779793674,0,0.658156191461918,0,0,1.23120413606075,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0.141353071433941,0,0,6.28048707973708,6.11030144933625,0,0,0,1.14581926067151,2.40773294189637,1.40558667435203,0,0,0,28.8046614080055,1.20990716048664,0.30607276163049,2.40109002588254,0.150323419414493,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0,0,5.41652671550293,0,1.25783230675811,1.82723292715464,0.821154570532092,1.84279131327997,0,2.03382666702479,0,0,0.379864775735272,0,0.0801588202515337,1.70762395791482,0,0.144090417154106,0,2.05913997434357,0,0.124252535565433,0,0,0,0,0,0.600420288709789,1.77976992559591,0,0,0,9.49560164325664,1.3749625440701,2.87149209830726,13.9775300349294,39.9180224767011,11.3817443295355,3.76227445925667,0,0,0,0,0,0,0,0.795229689809303,2.31545790389679,0,0.137539436597234,0,0,0,0.425246896606173,0,3.46745112116472,0.209818352539992,0.105600336519406,0,0,1.42939065274673,72.168024769832,0,0,0,0,0,0,0,0.113312091520126,4.54311924402056,1.32506888912221,0.517131825446202,1.85125642439766,0.171086837884329,0,2.56289790162467,3.77290332239198,5.79934677486074,1.9846640872478,0,0,0,3.80812462358632,6.5179372445902,8.57767614937692,17.7051220583294,0,0,2.56255156294123,1.001527445652,8.027728739661,1.77486482458964,0.683060432355218,0,0,0.454947352624943,4.28198000317451,0,0,0,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.449604575675217,0,1.43670473151436,1.8460472781668,0.504143392443436,0.276629009856872,1.61475645631851,5.71077681036618,0,0,0,0,0,0,0,2.632361492224,0,6.25211208986474,0,0,0,0.472763092328763,0.781078098613847,0.206686796501184,0.380494861163441,0,1.64477330057155,0.496211178389294,0,0,0.535701835878287,0.672567444437648,1.82089681270989,1.59363533945908,0.79832133146375,0,0,0.40781839786099,0.197318320688547,0,0,4.16013392107724,0.314231179832004,0,0,0.215927591218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| |||
|short_description=p3@PDK4 | |||
}} |
Revision as of 02:36, 14 September 2013
Short description: | p3@PDK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PDK4_5end |
Coexpression cluster: | C538_left_skeletal_heart_seminal_ductus_adipose_mature |
Association with transcript: | 229bp_to_ENST00000473301_5end |
EntrezGene: | PDK4 |
HGNC: | 8812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.40e-17 | 15 |
adipocyte of omentum tissue | 5.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.79e-56 | 114 |
neural tube | 7.61e-09 | 56 |
neural rod | 7.61e-09 | 56 |
future spinal cord | 7.61e-09 | 56 |
neural keel | 7.61e-09 | 56 |
regional part of nervous system | 1.30e-07 | 53 |
regional part of brain | 1.30e-07 | 53 |
regional part of forebrain | 1.80e-07 | 41 |
forebrain | 1.80e-07 | 41 |
anterior neural tube | 1.80e-07 | 41 |
future forebrain | 1.80e-07 | 41 |
male genital duct | 1.96e-07 | 3 |
internal male genitalia | 1.96e-07 | 3 |
neural plate | 2.23e-07 | 82 |
presumptive neural plate | 2.23e-07 | 82 |
organ system subdivision | 4.36e-07 | 223 |
structure with developmental contribution from neural crest | 4.75e-07 | 132 |
neurectoderm | 9.11e-07 | 86 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.