FFCP PHASE1:Hg19::chr7:99971755..99971793,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29992|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20396|TSSclassifier=N|UniProt=|association_with_transcript=88bp_to_ENST00000474013_5end|coexpression_cluster_id=C13|description=CAGE_peak_4_at_PILRA_5end|id=chr7:99971755..99971793,+|ontology_enrichment_celltype=CL:0000766!3.60e-46!76;CL:0002194!2.86e-45!63;CL:0000576!2.86e-45!63;CL:0000040!2.86e-45!63;CL:0000559!2.86e-45!63;CL:0002009!3.65e-45!65;CL:0002057!2.63e-44!42;CL:0000860!9.99e-42!45;CL:0000839!1.45e-41!70;CL:0000557!8.03e-41!71;CL:0000738!4.81e-40!140;CL:0002087!2.80e-36!119;CL:0002031!2.51e-33!124;CL:0000763!7.54e-33!112;CL:0000049!7.54e-33!112;CL:0000037!1.74e-31!172;CL:0000566!1.74e-31!172;CL:0002032!6.26e-30!165;CL:0000837!6.26e-30!165;CL:0000988!5.25e-28!182;CL:0002393!2.00e-10!9;CL:0002397!2.00e-10!9|ontology_enrichment_celltype_v019=CL:0000473;7.89e-71;39!CL:0000234;7.89e-71;39!CL:0000860;1.01e-70;33!CL:0002057;1.01e-70;33!CL:0000576;2.68e-59;48!CL:0000766;7.33e-48;69!CL:0000763;1.00e-21;100!CL:0002087;6.12e-20;104!CL:0000738;8.14e-18;136!CL:0000235;2.03e-15;6!CL:0002393;7.26e-11;6!CL:0002397;7.26e-11;6!CL:0000988;6.96e-10;177!CL:0000775;2.37e-09;3!CL:0000875;1.16e-08;3!CL:0002396;1.16e-08;3!CL:0000094;1.63e-08;8!CL:0000219;5.94e-08;193!CL:0002619;1.56e-07;3|ontology_enrichment_celltype_v019_2=CL:0000473,1.72e-109,48;CL:0000234,1.72e-109,48;CL:0002009,9.39e-105,61;CL:0002194,1.64e-104,59;CL:0000576,1.64e-104,59;CL:0000040,1.64e-104,59;CL:0000559,1.64e-104,59;CL:0000766,4.52e-103,72;CL:0000860,1.09e-94,42;CL:0002057,1.09e-94,42;CL:0000557,2.98e-94,67;CL:0000839,4.03e-92,66;CL:0000738,1.98e-71,136;CL:0002087,6.37e-70,115;CL:0000763,1.33e-66,108;CL:0000049,1.33e-66,108;CL:0002031,5.88e-64,120;CL:0000037,7.92e-55,168;CL:0002032,6.18e-54,161;CL:0000837,6.18e-54,161;CL:0000988,3.11e-51,177;CL:0000134,2.23e-19,354;CL:0002320,1.10e-18,361;CL:0002393,1.28e-17,9;CL:0002397,1.28e-17,9;CL:0000219,2.99e-16,386;CL:0000235,1.79e-15,6;CL:0000048,2.79e-13,427;CL:0000034,5.17e-13,441;CL:0000723,7.16e-13,433;CL:0000775,2.13e-09,3;CL:0000094,1.48e-08,8;CL:0000875,1.57e-08,3;CL:0002396,1.57e-08,3;CL:0002619,1.49e-07,3|ontology_enrichment_development_v019=CL:0002057;1.22e-67;42!CL:0000049;7.90e-20;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.27e-43!102;UBERON:0003061!1.27e-43!102;UBERON:0002193!1.44e-39!112;UBERON:0002371!4.26e-35!80;UBERON:0001474!1.83e-33!86;UBERON:0002405!4.05e-28!115;UBERON:0004765!3.53e-27!101;UBERON:0001434!3.53e-27!101;UBERON:0003081!1.72e-13!216;UBERON:0002204!1.08e-11!167;UBERON:0007023!4.25e-09!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-81,76;UBERON:0002390,5.01e-80,98;UBERON:0003061,5.01e-80,98;UBERON:0001474,1.21e-74,82;UBERON:0002193,2.81e-71,108;UBERON:0002405,2.97e-67,93;UBERON:0004765,7.82e-67,90;UBERON:0001434,8.22e-59,100;UBERON:0003081,5.46e-31,203;UBERON:0002204,9.10e-30,167;UBERON:0002384,1.43e-18,371;UBERON:0000926,1.33e-15,315;UBERON:0004120,1.33e-15,315;UBERON:0006603,1.33e-15,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.4487594116394,11.2477807546426,12.278881884934,2.75354993794233,0,0.928896739896456,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,0.553995408531877,6.61796676651468,1.95309783644267,1.11957737119962,1.94336199611388,1.28787783817093,2.4717700592526,1.88937971844405,1.69808842831471,3.95129362739664,1.23350366406548,3.09706370895104,3.74000110018796,1.2808035326455,2.12834006899727,7.23965929546899,7.74581620300591,5.41705946377367,3.57660445130949,1.91034305040492,2.02251136000576,8.26426509401437,3.53021929783703,7.67204550958849,1.31940520074686,1.19678194572979,2.13112375266347,17.1223450790865,14.1846306172785,7.4738669879469,4.52247597462138,3.12889751052121,2.38907729175628,7.87019353423379,8.10210799172642,9.49387162322653,6.33765858935825,3.18906449947565,3.56419697364239,3.36985893439485,3.45406853535464,3.37523732063868,3.13514018115373,3.18266683518544,5.47992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0.14828656316206,0,0,0,0,0,0.253019692019503,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.649094787309367,1.21890816109487,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,5.27121669744253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,3.7440682422278,3.56714789492948,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20396 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=88bp_to_ENST00000474013_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_4_at_PILRA_5end | |||
|id=chr7:99971755..99971793,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.60e-46!76;CL:0002194!2.86e-45!63;CL:0000576!2.86e-45!63;CL:0000040!2.86e-45!63;CL:0000559!2.86e-45!63;CL:0002009!3.65e-45!65;CL:0002057!2.63e-44!42;CL:0000860!9.99e-42!45;CL:0000839!1.45e-41!70;CL:0000557!8.03e-41!71;CL:0000738!4.81e-40!140;CL:0002087!2.80e-36!119;CL:0002031!2.51e-33!124;CL:0000763!7.54e-33!112;CL:0000049!7.54e-33!112;CL:0000037!1.74e-31!172;CL:0000566!1.74e-31!172;CL:0002032!6.26e-30!165;CL:0000837!6.26e-30!165;CL:0000988!5.25e-28!182;CL:0002393!2.00e-10!9;CL:0002397!2.00e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000473;7.89e-71;39!CL:0000234;7.89e-71;39!CL:0000860;1.01e-70;33!CL:0002057;1.01e-70;33!CL:0000576;2.68e-59;48!CL:0000766;7.33e-48;69!CL:0000763;1.00e-21;100!CL:0002087;6.12e-20;104!CL:0000738;8.14e-18;136!CL:0000235;2.03e-15;6!CL:0002393;7.26e-11;6!CL:0002397;7.26e-11;6!CL:0000988;6.96e-10;177!CL:0000775;2.37e-09;3!CL:0000875;1.16e-08;3!CL:0002396;1.16e-08;3!CL:0000094;1.63e-08;8!CL:0000219;5.94e-08;193!CL:0002619;1.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.72e-109,48;CL:0000234,1.72e-109,48;CL:0002009,9.39e-105,61;CL:0002194,1.64e-104,59;CL:0000576,1.64e-104,59;CL:0000040,1.64e-104,59;CL:0000559,1.64e-104,59;CL:0000766,4.52e-103,72;CL:0000860,1.09e-94,42;CL:0002057,1.09e-94,42;CL:0000557,2.98e-94,67;CL:0000839,4.03e-92,66;CL:0000738,1.98e-71,136;CL:0002087,6.37e-70,115;CL:0000763,1.33e-66,108;CL:0000049,1.33e-66,108;CL:0002031,5.88e-64,120;CL:0000037,7.92e-55,168;CL:0002032,6.18e-54,161;CL:0000837,6.18e-54,161;CL:0000988,3.11e-51,177;CL:0000134,2.23e-19,354;CL:0002320,1.10e-18,361;CL:0002393,1.28e-17,9;CL:0002397,1.28e-17,9;CL:0000219,2.99e-16,386;CL:0000235,1.79e-15,6;CL:0000048,2.79e-13,427;CL:0000034,5.17e-13,441;CL:0000723,7.16e-13,433;CL:0000775,2.13e-09,3;CL:0000094,1.48e-08,8;CL:0000875,1.57e-08,3;CL:0002396,1.57e-08,3;CL:0002619,1.49e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.22e-67;42!CL:0000049;7.90e-20;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.27e-43!102;UBERON:0003061!1.27e-43!102;UBERON:0002193!1.44e-39!112;UBERON:0002371!4.26e-35!80;UBERON:0001474!1.83e-33!86;UBERON:0002405!4.05e-28!115;UBERON:0004765!3.53e-27!101;UBERON:0001434!3.53e-27!101;UBERON:0003081!1.72e-13!216;UBERON:0002204!1.08e-11!167;UBERON:0007023!4.25e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.43e-81,76;UBERON:0002390,5.01e-80,98;UBERON:0003061,5.01e-80,98;UBERON:0001474,1.21e-74,82;UBERON:0002193,2.81e-71,108;UBERON:0002405,2.97e-67,93;UBERON:0004765,7.82e-67,90;UBERON:0001434,8.22e-59,100;UBERON:0003081,5.46e-31,203;UBERON:0002204,9.10e-30,167;UBERON:0002384,1.43e-18,371;UBERON:0000926,1.33e-15,315;UBERON:0004120,1.33e-15,315;UBERON:0006603,1.33e-15,315 | |||
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| |||
|short_description=p4@PILRA | |||
}} |
Revision as of 02:48, 14 September 2013
Short description: | p4@PILRA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PILRA_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 88bp_to_ENST00000474013_5end |
EntrezGene: | PILRA |
HGNC: | 20396 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.43e-81 | 76 |
hematopoietic system | 5.01e-80 | 98 |
blood island | 5.01e-80 | 98 |
bone element | 1.21e-74 | 82 |
hemolymphoid system | 2.81e-71 | 108 |
immune system | 2.97e-67 | 93 |
skeletal element | 7.82e-67 | 90 |
skeletal system | 8.22e-59 | 100 |
lateral plate mesoderm | 5.46e-31 | 203 |
musculoskeletal system | 9.10e-30 | 167 |
connective tissue | 1.43e-18 | 371 |
mesoderm | 1.33e-15 | 315 |
mesoderm-derived structure | 1.33e-15 | 315 |
presumptive mesoderm | 1.33e-15 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.