FFCP PHASE1:Hg19::chr8:142129999..142130013,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1333|description=CAGE_peak_at_chr8:142129999..142130013,+|id=chr8:142129999..142130013,+|ontology_enrichment_celltype=CL:0002057!2.89e-66!42;CL:0000860!3.89e-61!45;CL:0000766!2.80e-56!76;CL:0000763!1.29e-45!112;CL:0000049!1.29e-45!112;CL:0002194!7.65e-45!63;CL:0000576!7.65e-45!63;CL:0000040!7.65e-45!63;CL:0000559!7.65e-45!63;CL:0002009!3.76e-43!65;CL:0000839!1.15e-41!70;CL:0000557!6.23e-41!71;CL:0000738!1.47e-40!140;CL:0000037!3.07e-39!172;CL:0000566!3.07e-39!172;CL:0000988!3.17e-36!182;CL:0002032!6.19e-35!165;CL:0000837!6.19e-35!165;CL:0002087!3.92e-32!119;CL:0002031!5.19e-27!124;CL:0002393!9.37e-23!9;CL:0002397!9.37e-23!9;CL:0000094!4.24e-16!8;CL:0000134!1.39e-11!358;CL:0000081!2.34e-11!11;CL:0002320!4.46e-11!365;CL:0000219!2.64e-09!390;CL:0000775!5.66e-09!3;CL:0000875!9.49e-09!3;CL:0002396!9.49e-09!3;CL:0000767!1.03e-08!3;CL:0000842!2.75e-08!3;CL:0000048!1.03e-07!430;CL:0000723!2.06e-07!436;CL:0000034!5.05e-07!444|ontology_enrichment_celltype_v019=CL:0000094;5.92e-33;8!CL:0002393;8.69e-32;6!CL:0002397;8.69e-32;6!CL:0000576;4.06e-28;48!CL:0000766;3.65e-26;69!CL:0000081;9.69e-24;11!CL:0000860;4.61e-21;33!CL:0002057;4.61e-21;33!CL:0000775;3.20e-17;3!CL:0000875;8.12e-17;3!CL:0000767;8.12e-17;3!CL:0002396;8.12e-17;3!CL:0000473;4.42e-16;39!CL:0000234;4.42e-16;39!CL:0000763;2.11e-09;100|ontology_enrichment_celltype_v019_2=CL:0000766,1.85e-52,72;CL:0000860,5.41e-52,42;CL:0002057,5.41e-52,42;CL:0002393,1.15e-46,9;CL:0002397,1.15e-46,9;CL:0000473,6.35e-45,48;CL:0000234,6.35e-45,48;CL:0002194,5.04e-35,59;CL:0000576,5.04e-35,59;CL:0000040,5.04e-35,59;CL:0000559,5.04e-35,59;CL:0002009,9.55e-34,61;CL:0000763,3.09e-33,108;CL:0000049,3.09e-33,108;CL:0000094,6.24e-33,8;CL:0000839,6.92e-31,66;CL:0000557,2.30e-30,67;CL:0000738,2.13e-27,136;CL:0000081,1.01e-23,11;CL:0000037,4.38e-21,168;CL:0002032,1.83e-20,161;CL:0000837,1.83e-20,161;CL:0000988,1.02e-19,177;CL:0002087,1.04e-17,115;CL:0000775,2.79e-17,3;CL:0000875,8.36e-17,3;CL:0002396,8.36e-17,3;CL:0000767,9.84e-17,3;CL:0002031,4.59e-15,120;CL:0000134,6.52e-07,354|ontology_enrichment_development_v019=CL:0002057;9.93e-38;42!CL:0000049;9.11e-11;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!6.60e-52!102;UBERON:0003061!6.60e-52!102;UBERON:0002193!4.50e-48!112;UBERON:0002371!3.77e-35!80;UBERON:0001474!5.76e-32!86;UBERON:0004765!1.15e-25!101;UBERON:0001434!1.15e-25!101;UBERON:0002405!2.42e-25!115;UBERON:0003081!2.75e-20!216;UBERON:0000178!1.03e-19!15;UBERON:0000179!1.03e-19!15;UBERON:0000463!1.03e-19!15;UBERON:0002204!1.47e-11!167;UBERON:0002384!2.18e-10!375|ontology_enrichment_uberon_v019=UBERON:0000178;1.89e-28;15!UBERON:0000179;1.89e-28;15!UBERON:0000463;1.89e-28;15!UBERON:0002390;4.85e-12;32!UBERON:0002193;3.92e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.52e-43,98;UBERON:0003061,1.52e-43,98;UBERON:0002193,5.33e-39,108;UBERON:0000178,1.33e-28,15;UBERON:0000179,1.33e-28,15;UBERON:0000463,1.33e-28,15;UBERON:0002371,2.80e-26,76;UBERON:0001474,4.76e-24,82;UBERON:0004765,1.56e-21,90;UBERON:0002405,1.06e-20,93;UBERON:0001434,6.00e-19,100;UBERON:0003081,5.14e-18,203;UBERON:0002204,1.34e-09,167;UBERON:0000926,1.87e-09,315;UBERON:0004120,1.87e-09,315;UBERON:0006603,1.87e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.57345710739562,1.15148819429164,3.8704030829019,0,0,0,0,0,0,1.66198622559563,1.60435557976113,1.08505435357926,0,0,0,0.290796477559129,0.755751887377619,0.970336244751265,0.464858073811369,0,1.85823822537062,0,1.7931249457037,3.78371567821736,0.689491361473237,2.5819387343353,1.35426486594342,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0,2.59302754908121,2.98357325372886,0,0,0,2.00998932205395,2.08593167368081,6.95004303056373,0.605399502633369,0.368277635987565,0.632924774881769,4.22510572623884,1.4882300997553,2.51590374610051,1.34794357375794,0.750884464207532,1.12507910687956,3.13514018115373,1.19350006319454,1.82664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.94142780736755,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,4.58782324285425,3.41788312304498,1.66762242820452,3.70226045777575,5.18778648954174,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0.456469358066384,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0|short_description=p@chr8:142129999..142130013,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1333 | |||
|description=CAGE_peak_at_chr8:142129999..142130013,+ | |||
|id=chr8:142129999..142130013,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.89e-66!42;CL:0000860!3.89e-61!45;CL:0000766!2.80e-56!76;CL:0000763!1.29e-45!112;CL:0000049!1.29e-45!112;CL:0002194!7.65e-45!63;CL:0000576!7.65e-45!63;CL:0000040!7.65e-45!63;CL:0000559!7.65e-45!63;CL:0002009!3.76e-43!65;CL:0000839!1.15e-41!70;CL:0000557!6.23e-41!71;CL:0000738!1.47e-40!140;CL:0000037!3.07e-39!172;CL:0000566!3.07e-39!172;CL:0000988!3.17e-36!182;CL:0002032!6.19e-35!165;CL:0000837!6.19e-35!165;CL:0002087!3.92e-32!119;CL:0002031!5.19e-27!124;CL:0002393!9.37e-23!9;CL:0002397!9.37e-23!9;CL:0000094!4.24e-16!8;CL:0000134!1.39e-11!358;CL:0000081!2.34e-11!11;CL:0002320!4.46e-11!365;CL:0000219!2.64e-09!390;CL:0000775!5.66e-09!3;CL:0000875!9.49e-09!3;CL:0002396!9.49e-09!3;CL:0000767!1.03e-08!3;CL:0000842!2.75e-08!3;CL:0000048!1.03e-07!430;CL:0000723!2.06e-07!436;CL:0000034!5.05e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000094;5.92e-33;8!CL:0002393;8.69e-32;6!CL:0002397;8.69e-32;6!CL:0000576;4.06e-28;48!CL:0000766;3.65e-26;69!CL:0000081;9.69e-24;11!CL:0000860;4.61e-21;33!CL:0002057;4.61e-21;33!CL:0000775;3.20e-17;3!CL:0000875;8.12e-17;3!CL:0000767;8.12e-17;3!CL:0002396;8.12e-17;3!CL:0000473;4.42e-16;39!CL:0000234;4.42e-16;39!CL:0000763;2.11e-09;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.85e-52,72;CL:0000860,5.41e-52,42;CL:0002057,5.41e-52,42;CL:0002393,1.15e-46,9;CL:0002397,1.15e-46,9;CL:0000473,6.35e-45,48;CL:0000234,6.35e-45,48;CL:0002194,5.04e-35,59;CL:0000576,5.04e-35,59;CL:0000040,5.04e-35,59;CL:0000559,5.04e-35,59;CL:0002009,9.55e-34,61;CL:0000763,3.09e-33,108;CL:0000049,3.09e-33,108;CL:0000094,6.24e-33,8;CL:0000839,6.92e-31,66;CL:0000557,2.30e-30,67;CL:0000738,2.13e-27,136;CL:0000081,1.01e-23,11;CL:0000037,4.38e-21,168;CL:0002032,1.83e-20,161;CL:0000837,1.83e-20,161;CL:0000988,1.02e-19,177;CL:0002087,1.04e-17,115;CL:0000775,2.79e-17,3;CL:0000875,8.36e-17,3;CL:0002396,8.36e-17,3;CL:0000767,9.84e-17,3;CL:0002031,4.59e-15,120;CL:0000134,6.52e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;9.93e-38;42!CL:0000049;9.11e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.60e-52!102;UBERON:0003061!6.60e-52!102;UBERON:0002193!4.50e-48!112;UBERON:0002371!3.77e-35!80;UBERON:0001474!5.76e-32!86;UBERON:0004765!1.15e-25!101;UBERON:0001434!1.15e-25!101;UBERON:0002405!2.42e-25!115;UBERON:0003081!2.75e-20!216;UBERON:0000178!1.03e-19!15;UBERON:0000179!1.03e-19!15;UBERON:0000463!1.03e-19!15;UBERON:0002204!1.47e-11!167;UBERON:0002384!2.18e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.89e-28;15!UBERON:0000179;1.89e-28;15!UBERON:0000463;1.89e-28;15!UBERON:0002390;4.85e-12;32!UBERON:0002193;3.92e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.52e-43,98;UBERON:0003061,1.52e-43,98;UBERON:0002193,5.33e-39,108;UBERON:0000178,1.33e-28,15;UBERON:0000179,1.33e-28,15;UBERON:0000463,1.33e-28,15;UBERON:0002371,2.80e-26,76;UBERON:0001474,4.76e-24,82;UBERON:0004765,1.56e-21,90;UBERON:0002405,1.06e-20,93;UBERON:0001434,6.00e-19,100;UBERON:0003081,5.14e-18,203;UBERON:0002204,1.34e-09,167;UBERON:0000926,1.87e-09,315;UBERON:0004120,1.87e-09,315;UBERON:0006603,1.87e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.57345710739562,1.15148819429164,3.8704030829019,0,0,0,0,0,0,1.66198622559563,1.60435557976113,1.08505435357926,0,0,0,0.290796477559129,0.755751887377619,0.970336244751265,0.464858073811369,0,1.85823822537062,0,1.7931249457037,3.78371567821736,0.689491361473237,2.5819387343353,1.35426486594342,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0.639337125799041,0,2.59302754908121,2.98357325372886,0,0,0,2.00998932205395,2.08593167368081,6.95004303056373,0.605399502633369,0.368277635987565,0.632924774881769,4.22510572623884,1.4882300997553,2.51590374610051,1.34794357375794,0.750884464207532,1.12507910687956,3.13514018115373,1.19350006319454,1.82664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5424333948851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49801404789436,2.99161459204025,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,1.94142780736755,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.04468565539302,4.58782324285425,3.41788312304498,1.66762242820452,3.70226045777575,5.18778648954174,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0.456469358066384,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr8:142129999..142130013,+ | |||
}} |
Revision as of 04:00, 14 September 2013
Short description: | p@chr8:142129999..142130013, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:142129999..142130013, + |
Coexpression cluster: | C1333_Eosinophils_CD14_Neutrophils_Whole_Basophils_Peripheral_CD14CD16 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.52e-43 | 98 |
blood island | 1.52e-43 | 98 |
hemolymphoid system | 5.33e-39 | 108 |
blood | 1.33e-28 | 15 |
haemolymphatic fluid | 1.33e-28 | 15 |
organism substance | 1.33e-28 | 15 |
bone marrow | 2.80e-26 | 76 |
bone element | 4.76e-24 | 82 |
skeletal element | 1.56e-21 | 90 |
immune system | 1.06e-20 | 93 |
skeletal system | 6.00e-19 | 100 |
lateral plate mesoderm | 5.14e-18 | 203 |
musculoskeletal system | 1.34e-09 | 167 |
mesoderm | 1.87e-09 | 315 |
mesoderm-derived structure | 1.87e-09 | 315 |
presumptive mesoderm | 1.87e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.