FFCP PHASE1:Hg19::chr8:21911054..21911086,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2039|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3382|TSSclassifier=S|UniProt=E5RJ61,Q08495|association_with_transcript=0bp_to_ENST00000381470,ENST00000519850,ENST00000519959,NM_001114137,uc010ltl.2_5end|coexpression_cluster_id=C786|description=CAGE_peak_9_at_EPB49_5end|id=chr8:21911054..21911086,+|ontology_enrichment_celltype=CL:1000497!1.71e-24!18;CL:0002518!1.71e-24!18;CL:1000507!2.51e-22!12;CL:1000494!2.51e-22!12;CL:1000449!1.23e-19!16;CL:0002681!5.77e-13!13;CL:0002584!5.77e-13!13;CL:0000239!1.00e-09!3;CL:1000615!1.00e-09!3;CL:0002306!1.00e-09!3;CL:0000181!2.34e-08!12;CL:0000417!2.34e-08!12;CL:0000668!2.34e-08!12;CL:0000414!2.34e-08!12;CL:0000412!2.34e-08!12;CL:0000182!2.34e-08!12|ontology_enrichment_celltype_v019=CL:1000497;2.41e-37;17!CL:0002518;2.41e-37;17!CL:1000507;2.90e-34;10!CL:1000494;2.90e-34;10!CL:1000449;3.01e-28;15!CL:0002681;1.48e-21;12!CL:0002584;1.48e-21;12!CL:0000239;1.05e-17;3!CL:1000615;1.05e-17;3!CL:0002306;1.05e-17;3!CL:0000182;5.96e-12;12!CL:0000313;4.13e-07;1|ontology_enrichment_celltype_v019_2=CL:1000497,2.78e-37,17;CL:0002518,2.78e-37,17;CL:1000507,3.88e-34,10;CL:1000494,3.88e-34,10;CL:1000449,3.43e-28,15;CL:0002681,1.68e-21,12;CL:0002584,1.68e-21,12;CL:0000239,1.29e-17,3;CL:1000615,1.29e-17,3;CL:0002306,1.29e-17,3;CL:0000182,6.03e-12,12;CL:0000313,4.25e-07,1;CL:0000066,6.91e-07,253|ontology_enrichment_development_v019=UBERON:0003104;7.55e-21;31!UBERON:0004161;1.80e-18;11!UBERON:0009497;1.52e-15;13!UBERON:0003918;1.32e-09;10!UBERON:0007687;1.32e-09;10|ontology_enrichment_disease=DOID:305!4.26e-07!106|ontology_enrichment_disease_v019=DOID:2152;4.13e-07;1|ontology_enrichment_disease_v019_2=DOID:2152,4.25e-07,1|ontology_enrichment_uberon=UBERON:0005172!5.04e-29!55;UBERON:0005173!5.04e-29!55;UBERON:0002417!1.97e-25!61;UBERON:0000916!1.97e-25!61;UBERON:0002113!4.28e-24!27;UBERON:0003918!4.28e-24!27;UBERON:0005095!4.28e-24!27;UBERON:0007687!4.28e-24!27;UBERON:0009773!2.51e-22!12;UBERON:0001231!2.51e-22!12;UBERON:0004810!2.51e-22!12;UBERON:0000489!3.59e-22!32;UBERON:0006555!4.66e-22!17;UBERON:0005103!4.66e-22!17;UBERON:0000083!4.66e-22!17;UBERON:0009201!4.66e-22!17;UBERON:0004819!4.66e-22!17;UBERON:0006553!4.66e-22!17;UBERON:0003074!4.66e-22!17;UBERON:0003060!4.66e-22!17;UBERON:0000080!1.15e-20!18;UBERON:0002120!1.15e-20!18;UBERON:0004875!1.15e-20!18;UBERON:0005721!1.15e-20!18;UBERON:0005754!1.15e-20!18;UBERON:0007297!1.15e-20!18;UBERON:0004211!1.23e-19!16;UBERON:0001285!1.23e-19!16;UBERON:0007684!1.23e-19!16;UBERON:0003220!1.23e-19!16;UBERON:0004208!1.23e-19!16;UBERON:0004876!2.67e-18!20;UBERON:0003887!2.75e-17!21;UBERON:0006554!6.70e-17!44;UBERON:0001008!2.04e-16!45;UBERON:0000058!8.02e-16!26;UBERON:0005177!8.41e-15!107;UBERON:0001225!5.77e-13!13;UBERON:0008987!5.77e-13!13;UBERON:0003886!2.00e-12!63;UBERON:0000466!4.52e-12!126;UBERON:0003064!6.92e-12!37;UBERON:0009569!1.71e-11!113;UBERON:0002107!6.98e-11!19;UBERON:0006925!6.98e-11!19;UBERON:0008836!6.98e-11!19;UBERON:0002553!1.11e-10!70;UBERON:0001851!2.98e-10!16;UBERON:0006853!1.00e-09!3;UBERON:0007685!1.00e-09!3;UBERON:0004134!1.00e-09!3;UBERON:0009497!1.35e-09!25;UBERON:0000015!1.35e-09!25;UBERON:0002423!1.35e-09!25;UBERON:0006235!1.35e-09!25;UBERON:0004161!1.35e-09!25;UBERON:0000353!1.46e-09!17;UBERON:0008835!3.80e-09!22;UBERON:0003894!3.80e-09!22;UBERON:0009854!1.14e-08!23;UBERON:0003929!1.95e-08!54;UBERON:0003103!6.25e-08!69;UBERON:0007499!7.84e-08!25;UBERON:0002368!9.41e-08!35;UBERON:0005057!1.84e-07!26;UBERON:0009856!1.84e-07!26|ontology_enrichment_uberon_v019=UBERON:0002113;7.57e-37;24!UBERON:0011143;7.57e-37;24!UBERON:0004211;2.90e-34;10!UBERON:0009773;2.90e-34;10!UBERON:0001231;2.90e-34;10!UBERON:0004810;2.90e-34;10!UBERON:0000489;4.89e-30;29!UBERON:0006554;6.01e-29;30!UBERON:0001008;6.01e-29;30!UBERON:0006555;3.01e-28;15!UBERON:0004819;3.01e-28;15!UBERON:0001285;3.01e-28;15!UBERON:0007684;3.01e-28;15!UBERON:0005172;1.34e-26;52!UBERON:0005173;1.34e-26;52!UBERON:0001225;1.48e-21;12!UBERON:0008987;1.48e-21;12!UBERON:0002417;1.88e-19;58!UBERON:0000916;1.88e-19;58!UBERON:0006853;1.05e-17;3!UBERON:0007685;1.05e-17;3!UBERON:0004134;1.05e-17;3!UBERON:0001851;4.43e-17;15!UBERON:0000353;4.43e-17;15!UBERON:0002107;6.77e-14;19!UBERON:0006925;6.77e-14;19!UBERON:0002368;9.55e-11;33!UBERON:0002423;2.42e-10;25!UBERON:0006947;2.51e-08;3!UBERON:0004054;2.51e-08;3!UBERON:0005177;3.64e-08;99!UBERON:0002365;8.17e-08;31!UBERON:0002330;8.17e-08;31!UBERON:0009569;2.84e-07;110!UBERON:0001301;4.13e-07;1!UBERON:0004911;4.13e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.49e-41,54;UBERON:0005173,1.49e-41,54;UBERON:0002113,2.21e-39,26;UBERON:0003918,2.21e-39,26;UBERON:0011143,2.21e-39,26;UBERON:0005095,2.21e-39,26;UBERON:0007687,2.21e-39,26;UBERON:0002417,6.07e-37,60;UBERON:0000916,6.07e-37,60;UBERON:0004810,3.88e-34,10;UBERON:0006555,1.06e-32,16;UBERON:0004819,1.06e-32,16;UBERON:0000489,1.47e-32,31;UBERON:0004211,3.43e-28,15;UBERON:0009773,3.43e-28,15;UBERON:0001231,3.43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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2039 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3382 | |||
|TSSclassifier=S | |||
|UniProt=E5RJ61,Q08495 | |||
|association_with_transcript=0bp_to_ENST00000381470,ENST00000519850,ENST00000519959,NM_001114137,uc010ltl.2_5end | |||
|coexpression_cluster_id=C786 | |||
|description=CAGE_peak_9_at_EPB49_5end | |||
|id=chr8:21911054..21911086,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.71e-24!18;CL:0002518!1.71e-24!18;CL:1000507!2.51e-22!12;CL:1000494!2.51e-22!12;CL:1000449!1.23e-19!16;CL:0002681!5.77e-13!13;CL:0002584!5.77e-13!13;CL:0000239!1.00e-09!3;CL:1000615!1.00e-09!3;CL:0002306!1.00e-09!3;CL:0000181!2.34e-08!12;CL:0000417!2.34e-08!12;CL:0000668!2.34e-08!12;CL:0000414!2.34e-08!12;CL:0000412!2.34e-08!12;CL:0000182!2.34e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.41e-37;17!CL:0002518;2.41e-37;17!CL:1000507;2.90e-34;10!CL:1000494;2.90e-34;10!CL:1000449;3.01e-28;15!CL:0002681;1.48e-21;12!CL:0002584;1.48e-21;12!CL:0000239;1.05e-17;3!CL:1000615;1.05e-17;3!CL:0002306;1.05e-17;3!CL:0000182;5.96e-12;12!CL:0000313;4.13e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.78e-37,17;CL:0002518,2.78e-37,17;CL:1000507,3.88e-34,10;CL:1000494,3.88e-34,10;CL:1000449,3.43e-28,15;CL:0002681,1.68e-21,12;CL:0002584,1.68e-21,12;CL:0000239,1.29e-17,3;CL:1000615,1.29e-17,3;CL:0002306,1.29e-17,3;CL:0000182,6.03e-12,12;CL:0000313,4.25e-07,1;CL:0000066,6.91e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0003104;7.55e-21;31!UBERON:0004161;1.80e-18;11!UBERON:0009497;1.52e-15;13!UBERON:0003918;1.32e-09;10!UBERON:0007687;1.32e-09;10 | |||
|ontology_enrichment_disease=DOID:305!4.26e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:2152;4.13e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,4.25e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005172!5.04e-29!55;UBERON:0005173!5.04e-29!55;UBERON:0002417!1.97e-25!61;UBERON:0000916!1.97e-25!61;UBERON:0002113!4.28e-24!27;UBERON:0003918!4.28e-24!27;UBERON:0005095!4.28e-24!27;UBERON:0007687!4.28e-24!27;UBERON:0009773!2.51e-22!12;UBERON:0001231!2.51e-22!12;UBERON:0004810!2.51e-22!12;UBERON:0000489!3.59e-22!32;UBERON:0006555!4.66e-22!17;UBERON:0005103!4.66e-22!17;UBERON:0000083!4.66e-22!17;UBERON:0009201!4.66e-22!17;UBERON:0004819!4.66e-22!17;UBERON:0006553!4.66e-22!17;UBERON:0003074!4.66e-22!17;UBERON:0003060!4.66e-22!17;UBERON:0000080!1.15e-20!18;UBERON:0002120!1.15e-20!18;UBERON:0004875!1.15e-20!18;UBERON:0005721!1.15e-20!18;UBERON:0005754!1.15e-20!18;UBERON:0007297!1.15e-20!18;UBERON:0004211!1.23e-19!16;UBERON:0001285!1.23e-19!16;UBERON:0007684!1.23e-19!16;UBERON:0003220!1.23e-19!16;UBERON:0004208!1.23e-19!16;UBERON:0004876!2.67e-18!20;UBERON:0003887!2.75e-17!21;UBERON:0006554!6.70e-17!44;UBERON:0001008!2.04e-16!45;UBERON:0000058!8.02e-16!26;UBERON:0005177!8.41e-15!107;UBERON:0001225!5.77e-13!13;UBERON:0008987!5.77e-13!13;UBERON:0003886!2.00e-12!63;UBERON:0000466!4.52e-12!126;UBERON:0003064!6.92e-12!37;UBERON:0009569!1.71e-11!113;UBERON:0002107!6.98e-11!19;UBERON:0006925!6.98e-11!19;UBERON:0008836!6.98e-11!19;UBERON:0002553!1.11e-10!70;UBERON:0001851!2.98e-10!16;UBERON:0006853!1.00e-09!3;UBERON:0007685!1.00e-09!3;UBERON:0004134!1.00e-09!3;UBERON:0009497!1.35e-09!25;UBERON:0000015!1.35e-09!25;UBERON:0002423!1.35e-09!25;UBERON:0006235!1.35e-09!25;UBERON:0004161!1.35e-09!25;UBERON:0000353!1.46e-09!17;UBERON:0008835!3.80e-09!22;UBERON:0003894!3.80e-09!22;UBERON:0009854!1.14e-08!23;UBERON:0003929!1.95e-08!54;UBERON:0003103!6.25e-08!69;UBERON:0007499!7.84e-08!25;UBERON:0002368!9.41e-08!35;UBERON:0005057!1.84e-07!26;UBERON:0009856!1.84e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;7.57e-37;24!UBERON:0011143;7.57e-37;24!UBERON:0004211;2.90e-34;10!UBERON:0009773;2.90e-34;10!UBERON:0001231;2.90e-34;10!UBERON:0004810;2.90e-34;10!UBERON:0000489;4.89e-30;29!UBERON:0006554;6.01e-29;30!UBERON:0001008;6.01e-29;30!UBERON:0006555;3.01e-28;15!UBERON:0004819;3.01e-28;15!UBERON:0001285;3.01e-28;15!UBERON:0007684;3.01e-28;15!UBERON:0005172;1.34e-26;52!UBERON:0005173;1.34e-26;52!UBERON:0001225;1.48e-21;12!UBERON:0008987;1.48e-21;12!UBERON:0002417;1.88e-19;58!UBERON:0000916;1.88e-19;58!UBERON:0006853;1.05e-17;3!UBERON:0007685;1.05e-17;3!UBERON:0004134;1.05e-17;3!UBERON:0001851;4.43e-17;15!UBERON:0000353;4.43e-17;15!UBERON:0002107;6.77e-14;19!UBERON:0006925;6.77e-14;19!UBERON:0002368;9.55e-11;33!UBERON:0002423;2.42e-10;25!UBERON:0006947;2.51e-08;3!UBERON:0004054;2.51e-08;3!UBERON:0005177;3.64e-08;99!UBERON:0002365;8.17e-08;31!UBERON:0002330;8.17e-08;31!UBERON:0009569;2.84e-07;110!UBERON:0001301;4.13e-07;1!UBERON:0004911;4.13e-07;1 | |||
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|short_description=p9@EPB49 | |||
}} |
Revision as of 04:32, 14 September 2013
Short description: | p9@EPB49 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_EPB49_5end |
Coexpression cluster: | C786_liver_hepatocellular_placenta_hepatoblastoma_normal_Intestinal_Wilms |
Association with transcript: | 0bp_to_ENST00000381470, ENST00000519850, ENST00000519959, NM_001114137, uc010ltl.2_5end |
EntrezGene: | EPB49 |
HGNC: | 3382 |
UniProt: | E5RJ61Q08495 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.78e-37 | 17 |
kidney epithelial cell | 2.78e-37 | 17 |
kidney tubule cell | 3.88e-34 | 10 |
nephron tubule epithelial cell | 3.88e-34 | 10 |
epithelial cell of nephron | 3.43e-28 | 15 |
kidney cortical cell | 1.68e-21 | 12 |
renal cortical epithelial cell | 1.68e-21 | 12 |
brush border epithelial cell | 1.29e-17 | 3 |
kidney cortex tubule cell | 1.29e-17 | 3 |
epithelial cell of proximal tubule | 1.29e-17 | 3 |
hepatocyte | 6.03e-12 | 12 |
serous secreting cell | 4.25e-07 | 1 |
epithelial cell | 6.91e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 4.25e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.