FFCP PHASE1:Mm9::chr4:151822917..151822957,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16498|HGNC=|MCL_coexpression_id=36|UniProt=P62482,Q3U0B0,Q3UPV6|association_with_transcript=0bp_to_ENSMUST00000105648,ENSMUST00000159840,uc008wal.1,uc008wam.1_5end|description=CAGE_peak_2_at_Kcnab2_5end|id=chr4:151822917..151822957,-|ontology_enrichment_celltype=CL:0000988!1.43e-10!32;CL:0002032!1.43e-10!32;CL:0000037!1.43e-10!32;CL:0000566!1.43e-10!32;CL:0000837!1.43e-10!32;CL:0000738!3.26e-08!17;CL:0002087!3.26e-08!17;CL:0002031!3.61e-08!25;CL:0000838!2.65e-07!12;CL:0000084!6.96e-07!11;CL:0000827!6.96e-07!11|ontology_enrichment_celltype_v019_2=CL:0000988,1.44e-12,32;CL:0002032,1.44e-12,32;CL:0000037,1.44e-12,32;CL:0000837,1.44e-12,32;CL:0002031,5.28e-10,25;CL:0000738,6.26e-09,17;CL:0002087,6.26e-09,17;CL:0000838,4.03e-08,12;CL:0000084,1.21e-07,11;CL:0000827,1.21e-07,11;CL:0002320,1.31e-07,46;CL:0000134,1.31e-07,46;CL:0000542,4.63e-07,13;CL:0000051,4.63e-07,13;CL:0000049,7.56e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.74e-20!48;UBERON:0002390!6.75e-19!45;UBERON:0003061!6.75e-19!45;UBERON:0002405!5.03e-18!70;UBERON:0004177!5.70e-11!29;UBERON:0003081!6.23e-11!88;UBERON:0005057!1.96e-09!51;UBERON:0002371!8.17e-09!16;UBERON:0003408!9.91e-09!24;UBERON:0006562!1.18e-08!24;UBERON:0001557!1.18e-08!24;UBERON:0001042!1.18e-08!24;UBERON:0008814!1.18e-08!24;UBERON:0009145!1.18e-08!24;UBERON:0002370!1.58e-08!23;UBERON:0000974!1.58e-08!23;UBERON:0004807!1.58e-08!23;UBERON:0005058!1.58e-08!23;UBERON:0003351!1.58e-08!23;UBERON:0009113!1.58e-08!23;UBERON:0003295!1.58e-08!23;UBERON:0009722!1.58e-08!23;UBERON:0005562!1.58e-08!23;UBERON:0007690!1.58e-08!23;UBERON:0001474!2.25e-08!22;UBERON:0004765!2.25e-08!22;UBERON:0001434!2.25e-08!22;UBERON:0000926!2.85e-08!193;UBERON:0004120!2.85e-08!193;UBERON:0006603!2.85e-08!193;UBERON:0001041!4.34e-08!92;UBERON:0000077!5.89e-08!97;UBERON:0001004!1.49e-07!42;UBERON:0000065!2.45e-07!41;UBERON:0002204!3.66e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.85e-24,48;UBERON:0002405,6.85e-24,48;UBERON:0002390,1.90e-22,45;UBERON:0003061,1.90e-22,45;UBERON:0004177,2.72e-13,29;UBERON:0005057,2.72e-13,29;UBERON:0003081,3.74e-11,87;UBERON:0000077,5.60e-11,35;UBERON:0003408,1.07e-10,24;UBERON:0006562,1.32e-10,24;UBERON:0001557,1.32e-10,24;UBERON:0001042,1.32e-10,24;UBERON:0008814,1.32e-10,24;UBERON:0009145,1.32e-10,24;UBERON:0002370,1.79e-10,23;UBERON:0000974,1.79e-10,23;UBERON:0004807,1.79e-10,23;UBERON:0005058,1.79e-10,23;UBERON:0003351,1.79e-10,23;UBERON:0009113,1.79e-10,23;UBERON:0003295,1.79e-10,23;UBERON:0009722,1.79e-10,23;UBERON:0005562,1.79e-10,23;UBERON:0007690,1.79e-10,23;UBERON:0002371,7.61e-10,16;UBERON:0001474,1.58e-09,22;UBERON:0004765,1.58e-09,22;UBERON:0001434,1.58e-09,22;UBERON:0001004,6.63e-09,42;UBERON:0001041,6.67e-09,80;UBERON:0000065,1.18e-08,41;UBERON:0002204,2.64e-08,32;UBERON:0000072,2.65e-08,27;UBERON:0002384,1.31e-07,46;UBERON:0000926,5.49e-07,120;UBERON:0004120,5.49e-07,120;UBERON:0006603,5.49e-07,120|phase1_expression=0.320297694209588,0,0,0,0,0,0,53.327932581371,13.6565060487117,14.9801296846076,7.70480857014772,16.113976117058,46.3953978113568,62.3307469247451,16.9885978525988,16.6029719259657,5.59649502502517,32.1771408665402,28.3826877563879,30.5560549294582,1.7008658030214,33.6596324571001,27.6871776487272,5.43974237497583,5.04700418347774,0,0,0,0.380046838912748,0.756090389279792,1.33038306393183,0,0,0,0,0,0,86.6360475625399,67.1948396290468,78.5285615960697,68.2348526115977,63.5232301011354,71.3700218955796,0,0,0,0,0,0,0,0,0,23.8251300601986,50.0499877987828,76.2932924053393,0.771778308107841,3.43840127926508,0.515672092277442,0,0,0,0.677689064138264,0,29.2467408116455,54.3876499411836,44.0497671266582,13.7816050838466,5.76327457982332,0,0,0.210324961351382,0,1.10434270475807,0.122490799214954,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0,0,0,0,0,0.294628585473668,0.142371680799103,0.559198337475902,1.06016670666458,0.68014404096107,0.289864488701678,0,0,0.539703191637817,0,0,4.0728881838208,0.340860645156116,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0,2.74041311325744,55.9305828677891,4.00793775475027,1.04091196059682,0.608930956624282,1.38369298353635,0.301445281105245,0.587943535678524,1.38233250462643,0,4.77177877835708,35.384422077995,4.36770494858005,11.2629174414801,9.69750506270444,1.86391761218122,0,0,4.08731288333746,24.8017307727255,23.3962065087429,33.419469720216,0.149790639404823,0.457500602818626,0.125654352112864,0.869121600961382,1.27857728665165,0.20778804455956,0.973447578406546,1.2220723662038,13.0627319140598,0.252722758433675,0.210441855886474,0.390361328888111,0.229902104433473,0.720248519221397,1.05493372485001,0.680364991513279,0.384341160854549,0.187403449119458,0,0.215567992932842,0.189106080167819,0.351902248327898,1.53437012699302,1.94633074457919,1.0447564995665,1.64625709126355,0.796137067273973,47.7504967373,35.256663274716,40.6353804135697,0.621377317606506,1.17263029990548,0,0.23674473558521,0.983821158737019,0.154267112887378,0.697601834251224,0.536546802799238,0.583826711835847,0.329119699826961,1.14917224855367,0.891756905004413,1.46199987425332,3.07370161407471,1.20785776884335,2.10289948564127,0.102904612379284,3.63460661282178,1.05780226665418,0.426576501070468,0.696710015581316,0.902072229254653,0,0.889512175379481,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,1.59165177632921,2.14460495831032,1.79763881730844,0.432276099749388,1.7922714592893,0.758671603812327,0.456994050438915,0,0,0.193952487167626,0,0.442655759869801,0.295220295959204,0.31399745568275,0.370191491765402,0.296452627087149,5.6727335943472,6.09332884850929,8.7696223830093,8.92584534109413,13.7470981058878,9.67578236769395,8.91858026097513,6.16113861745134,7.68771956926628,7.18841032636773,5.20997326735905,2.80833905803104,1.01031551178845,0.179397413521912,2.41221760681684,18.1058126363273,0.757965647081939,0.162964976442026,0.678980343100753,0.234690248288502,3.1826188913945,2.38043640886014,1.95133647857799,3.78324345854858,4.20782910332672,5.10255259703959,7.70157579163969,7.25276923836761,4.91806799177139,24.1266054302836,49.4954172275026,1.47529281905711,2.48343071674259,0.321101179975584,0.117211686592203,0.655739781506702,2.01976741763498,0,0,0,0,0,0,0,0.584511715822624,0,0,1.27746076687442,0.712262414669021,0.977321756121456,1.64970122972535,2.65490276679926,0.728341908464944,0,0.565815239267694,0.885905678642318,0.922305443831782,2.06742634534577,1.09060118843252,1.42598951353889,2.52829406348653,2.10837217149998,2.06271086496374,0,0,0,0.643011105094777,0,0.891844088010353,0.658196082408484,0.913394847343798,2.58138878870081,0.42366414172764,0.220528398054962,2.96795255294664,2.26050197374268,1.93001359770099,2.26807453605959,2.1338316966858,1.7488850197791,0.556275906031529,26.3141156428693,13.2087595496462,12.9636169158798,20.3437933565066,22.9646302571322,23.7929300134784,25.3267860690844,25.4711643229058,29.4365944203423,0.954670618015114,0.158167996790568,2.43983360552218,0.86404272657441,0.418176592028937,0.436725127492355,0.674321731924103,1.23980183588004,0.523511883968059,1.03691978633434,3.72803587852155,0.56369293868419,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0,0,0.2604087696879,0.838874755405687,0.241584120826006,0,48.0336903354831,27.165178848882,62.6536838705446,78.7320187245438,71.2526248756576,66.1608911421612,42.1886027815091,53.3159193100224,41.0933451288961,38.8654713940499,39.6246907587783,41.8094308373538,40.601397172219,30.7386252737526,2.49403421976732,0,0,0,1.54551675225752,6.00583921443782,0.915758121336325,1.71494703263253,0,0,0.920650473014354,0,0,0,1.5107877947794,0.675022500231806,0,2.26571204492102,0.51776031175182,0,1.19707462020309,1.53660245178721,0.972426868273176,2.51535795153579,1.65459157605013,1.33348036680969,1.64828045791115,1.92551525755089,1.76888048234658,2.28131369901216,2.82939512079114,0.936415074698824,1.21647789569252,1.32101578597911,0.476293691283074,1.73826488917283,0.964546102318525,0.824171801606613,1.47198920134397,3.77156177623957,2.12970967391205,3.57654284920981,2.32554266611726,1.31753132581463,1.94613598150856,1.46342378298218,2.10455769150274,2.17286582153379,1.68342681497322,1.54225523561426,1.37906275325789,3.27384834535751,1.39443157067369,2.3148793317737,1.24905288968973,2.33931608445408,2.14871054048298,1.14772999241306,5.95596831622692,2.78241402744506|short_description=p2@Kcnab2}} | ||
|EntrezGene=16498 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=P62482,Q3U0B0,Q3UPV6 | |||
|association_with_transcript=0bp_to_ENSMUST00000105648,ENSMUST00000159840,uc008wal.1,uc008wam.1_5end | |||
|description=CAGE_peak_2_at_Kcnab2_5end | |||
|id=chr4:151822917..151822957,- | |||
|ontology_enrichment_celltype=CL:0000988!1.43e-10!32;CL:0002032!1.43e-10!32;CL:0000037!1.43e-10!32;CL:0000566!1.43e-10!32;CL:0000837!1.43e-10!32;CL:0000738!3.26e-08!17;CL:0002087!3.26e-08!17;CL:0002031!3.61e-08!25;CL:0000838!2.65e-07!12;CL:0000084!6.96e-07!11;CL:0000827!6.96e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.44e-12,32;CL:0002032,1.44e-12,32;CL:0000037,1.44e-12,32;CL:0000837,1.44e-12,32;CL:0002031,5.28e-10,25;CL:0000738,6.26e-09,17;CL:0002087,6.26e-09,17;CL:0000838,4.03e-08,12;CL:0000084,1.21e-07,11;CL:0000827,1.21e-07,11;CL:0002320,1.31e-07,46;CL:0000134,1.31e-07,46;CL:0000542,4.63e-07,13;CL:0000051,4.63e-07,13;CL:0000049,7.56e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.74e-20!48;UBERON:0002390!6.75e-19!45;UBERON:0003061!6.75e-19!45;UBERON:0002405!5.03e-18!70;UBERON:0004177!5.70e-11!29;UBERON:0003081!6.23e-11!88;UBERON:0005057!1.96e-09!51;UBERON:0002371!8.17e-09!16;UBERON:0003408!9.91e-09!24;UBERON:0006562!1.18e-08!24;UBERON:0001557!1.18e-08!24;UBERON:0001042!1.18e-08!24;UBERON:0008814!1.18e-08!24;UBERON:0009145!1.18e-08!24;UBERON:0002370!1.58e-08!23;UBERON:0000974!1.58e-08!23;UBERON:0004807!1.58e-08!23;UBERON:0005058!1.58e-08!23;UBERON:0003351!1.58e-08!23;UBERON:0009113!1.58e-08!23;UBERON:0003295!1.58e-08!23;UBERON:0009722!1.58e-08!23;UBERON:0005562!1.58e-08!23;UBERON:0007690!1.58e-08!23;UBERON:0001474!2.25e-08!22;UBERON:0004765!2.25e-08!22;UBERON:0001434!2.25e-08!22;UBERON:0000926!2.85e-08!193;UBERON:0004120!2.85e-08!193;UBERON:0006603!2.85e-08!193;UBERON:0001041!4.34e-08!92;UBERON:0000077!5.89e-08!97;UBERON:0001004!1.49e-07!42;UBERON:0000065!2.45e-07!41;UBERON:0002204!3.66e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.85e-24,48;UBERON:0002405,6.85e-24,48;UBERON:0002390,1.90e-22,45;UBERON:0003061,1.90e-22,45;UBERON:0004177,2.72e-13,29;UBERON:0005057,2.72e-13,29;UBERON:0003081,3.74e-11,87;UBERON:0000077,5.60e-11,35;UBERON:0003408,1.07e-10,24;UBERON:0006562,1.32e-10,24;UBERON:0001557,1.32e-10,24;UBERON:0001042,1.32e-10,24;UBERON:0008814,1.32e-10,24;UBERON:0009145,1.32e-10,24;UBERON:0002370,1.79e-10,23;UBERON:0000974,1.79e-10,23;UBERON:0004807,1.79e-10,23;UBERON:0005058,1.79e-10,23;UBERON:0003351,1.79e-10,23;UBERON:0009113,1.79e-10,23;UBERON:0003295,1.79e-10,23;UBERON:0009722,1.79e-10,23;UBERON:0005562,1.79e-10,23;UBERON:0007690,1.79e-10,23;UBERON:0002371,7.61e-10,16;UBERON:0001474,1.58e-09,22;UBERON:0004765,1.58e-09,22;UBERON:0001434,1.58e-09,22;UBERON:0001004,6.63e-09,42;UBERON:0001041,6.67e-09,80;UBERON:0000065,1.18e-08,41;UBERON:0002204,2.64e-08,32;UBERON:0000072,2.65e-08,27;UBERON:0002384,1.31e-07,46;UBERON:0000926,5.49e-07,120;UBERON:0004120,5.49e-07,120;UBERON:0006603,5.49e-07,120 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,53.327932581371,13.6565060487117,14.9801296846076,7.70480857014772,16.113976117058,46.3953978113568,62.3307469247451,16.9885978525988,16.6029719259657,5.59649502502517,32.1771408665402,28.3826877563879,30.5560549294582,1.7008658030214,33.6596324571001,27.6871776487272,5.43974237497583,5.04700418347774,0,0,0,0.380046838912748,0.756090389279792,1.33038306393183,0,0,0,0,0,0,86.6360475625399,67.1948396290468,78.5285615960697,68.2348526115977,63.5232301011354,71.3700218955796,0,0,0,0,0,0,0,0,0,23.8251300601986,50.0499877987828,76.2932924053393,0.771778308107841,3.43840127926508,0.515672092277442,0,0,0,0.677689064138264,0,29.2467408116455,54.3876499411836,44.0497671266582,13.7816050838466,5.76327457982332,0,0,0.210324961351382,0,1.10434270475807,0.122490799214954,0,0,0,0.255374676170375,0.307213066512487,0.131886287730194,0,0,0,0,0,0.294628585473668,0.142371680799103,0.559198337475902,1.06016670666458,0.68014404096107,0.289864488701678,0,0,0.539703191637817,0,0,4.0728881838208,0.340860645156116,0,0.35333957451034,0,0,0,0,0.216491041011214,0,0,2.74041311325744,55.9305828677891,4.00793775475027,1.04091196059682,0.608930956624282,1.38369298353635,0.301445281105245,0.587943535678524,1.38233250462643,0,4.77177877835708,35.384422077995,4.36770494858005,11.2629174414801,9.69750506270444,1.86391761218122,0,0,4.08731288333746,24.8017307727255,23.3962065087429,33.419469720216,0.149790639404823,0.457500602818626,0.125654352112864,0.869121600961382,1.27857728665165,0.20778804455956,0.973447578406546,1.2220723662038,13.0627319140598,0.252722758433675,0.210441855886474,0.390361328888111,0.229902104433473,0.720248519221397,1.05493372485001,0.680364991513279,0.384341160854549,0.187403449119458,0,0.215567992932842,0.189106080167819,0.351902248327898,1.53437012699302,1.94633074457919,1.0447564995665,1.64625709126355,0.796137067273973,47.7504967373,35.256663274716,40.6353804135697,0.621377317606506,1.17263029990548,0,0.23674473558521,0.983821158737019,0.154267112887378,0.697601834251224,0.536546802799238,0.583826711835847,0.329119699826961,1.14917224855367,0.891756905004413,1.46199987425332,3.07370161407471,1.20785776884335,2.10289948564127,0.102904612379284,3.63460661282178,1.05780226665418,0.426576501070468,0.696710015581316,0.902072229254653,0,0.889512175379481,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,1.59165177632921,2.14460495831032,1.79763881730844,0.432276099749388,1.7922714592893,0.758671603812327,0.456994050438915,0,0,0.193952487167626,0,0.442655759869801,0.295220295959204,0.31399745568275,0.370191491765402,0.296452627087149,5.6727335943472,6.09332884850929,8.7696223830093,8.92584534109413,13.7470981058878,9.67578236769395,8.91858026097513,6.16113861745134,7.68771956926628,7.18841032636773,5.20997326735905,2.80833905803104,1.01031551178845,0.179397413521912,2.41221760681684,18.1058126363273,0.757965647081939,0.162964976442026,0.678980343100753,0.234690248288502,3.1826188913945,2.38043640886014,1.95133647857799,3.78324345854858,4.20782910332672,5.10255259703959,7.70157579163969,7.25276923836761,4.91806799177139,24.1266054302836,49.4954172275026,1.47529281905711,2.48343071674259,0.321101179975584,0.117211686592203,0.655739781506702,2.01976741763498,0,0,0,0,0,0,0,0.584511715822624,0,0,1.27746076687442,0.712262414669021,0.977321756121456,1.64970122972535,2.65490276679926,0.728341908464944,0,0.565815239267694,0.885905678642318,0.922305443831782,2.06742634534577,1.09060118843252,1.42598951353889,2.52829406348653,2.10837217149998,2.06271086496374,0,0,0,0.643011105094777,0,0.891844088010353,0.658196082408484,0.913394847343798,2.58138878870081,0.42366414172764,0.220528398054962,2.96795255294664,2.26050197374268,1.93001359770099,2.26807453605959,2.1338316966858,1.7488850197791,0.556275906031529,26.3141156428693,13.2087595496462,12.9636169158798,20.3437933565066,22.9646302571322,23.7929300134784,25.3267860690844,25.4711643229058,29.4365944203423,0.954670618015114,0.158167996790568,2.43983360552218,0.86404272657441,0.418176592028937,0.436725127492355,0.674321731924103,1.23980183588004,0.523511883968059,1.03691978633434,3.72803587852155,0.56369293868419,0.149516546043979,0.165458490457098,0.388902376688095,0.645799117388655,0,0,0.2604087696879,0.838874755405687,0.241584120826006,0,48.0336903354831,27.165178848882,62.6536838705446,78.7320187245438,71.2526248756576,66.1608911421612,42.1886027815091,53.3159193100224,41.0933451288961,38.8654713940499,39.6246907587783,41.8094308373538,40.601397172219,30.7386252737526,2.49403421976732,0,0,0,1.54551675225752,6.00583921443782,0.915758121336325,1.71494703263253,0,0,0.920650473014354,0,0,0,1.5107877947794,0.675022500231806,0,2.26571204492102,0.51776031175182,0,1.19707462020309,1.53660245178721,0.972426868273176,2.51535795153579,1.65459157605013,1.33348036680969,1.64828045791115,1.92551525755089,1.76888048234658,2.28131369901216,2.82939512079114,0.936415074698824,1.21647789569252,1.32101578597911,0.476293691283074,1.7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| |||
|short_description=p2@Kcnab2 | |||
}} |
Revision as of 04:36, 14 September 2013
Short description: | p2@Kcnab2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnab2_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000105648, ENSMUST00000159840, uc008wal.1, uc008wam.1_5end |
EntrezGene: | Kcnab2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.44e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.44e-12 | 32 |
hematopoietic stem cell | 1.44e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.44e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 5.28e-10 | 25 |
leukocyte | 6.26e-09 | 17 |
nongranular leukocyte | 6.26e-09 | 17 |
lymphoid lineage restricted progenitor cell | 4.03e-08 | 12 |
T cell | 1.21e-07 | 11 |
pro-T cell | 1.21e-07 | 11 |
connective tissue cell | 1.31e-07 | 46 |
mesenchymal cell | 1.31e-07 | 46 |
lymphocyte | 4.63e-07 | 13 |
common lymphoid progenitor | 4.63e-07 | 13 |
common myeloid progenitor | 7.56e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.