FFCP PHASE1:Mm9::chr5:65482858..65482876,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=243025|HGNC=|MCL_coexpression_id=3|UniProt=D3Z447|association_with_transcript=-64bp_to_ENSMUST00000043352_5end|description=CAGE_peak_2_at_Tmem156_5end|id=chr5:65482858..65482876,-|ontology_enrichment_celltype=CL:0000988!7.14e-10!32;CL:0002032!7.14e-10!32;CL:0000037!7.14e-10!32;CL:0000566!7.14e-10!32;CL:0000837!7.14e-10!32;CL:0000838!3.94e-07!12;CL:0002031!7.03e-07!25|ontology_enrichment_celltype_v019_2=CL:0000988,6.47e-17,32;CL:0002032,6.47e-17,32;CL:0000037,6.47e-17,32;CL:0000837,6.47e-17,32;CL:0002031,1.16e-10,25;CL:0000838,5.70e-10,12;CL:0002320,8.79e-10,46;CL:0000134,8.79e-10,46;CL:0000049,3.93e-09,19;CL:0000542,5.14e-09,13;CL:0000051,5.14e-09,13;CL:0000084,9.57e-09,11;CL:0000827,9.57e-09,11;CL:0000738,1.31e-07,17;CL:0002087,1.31e-07,17;CL:0000219,1.93e-07,54;CL:0000791,8.72e-07,9;CL:0000789,8.72e-07,9;CL:0002420,8.72e-07,9;CL:0002419,8.72e-07,9;CL:0000790,8.72e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.47e-14!48;UBERON:0002390!3.90e-13!45;UBERON:0003061!3.90e-13!45;UBERON:0002405!9.63e-13!70;UBERON:0004177!5.25e-11!29;UBERON:0005057!8.87e-09!51;UBERON:0004119!2.81e-08!130;UBERON:0000925!2.81e-08!130;UBERON:0006595!2.81e-08!130;UBERON:0003408!2.91e-08!24;UBERON:0000077!4.08e-08!97;UBERON:0001007!6.09e-08!128;UBERON:0001555!6.09e-08!128;UBERON:0007026!6.09e-08!128;UBERON:0001041!7.95e-08!92;UBERON:0003081!1.02e-07!88;UBERON:0002370!1.10e-07!23;UBERON:0000974!1.10e-07!23;UBERON:0004807!1.10e-07!23;UBERON:0005058!1.10e-07!23;UBERON:0003351!1.10e-07!23;UBERON:0009113!1.10e-07!23;UBERON:0003295!1.10e-07!23;UBERON:0009722!1.10e-07!23;UBERON:0005562!1.10e-07!23;UBERON:0007690!1.10e-07!23;UBERON:0004921!2.16e-07!126;UBERON:0004185!2.16e-07!126;UBERON:0001004!4.76e-07!42;UBERON:0006562!5.30e-07!24;UBERON:0001557!5.30e-07!24;UBERON:0001042!5.30e-07!24;UBERON:0008814!5.30e-07!24;UBERON:0009145!5.30e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.05e-23,48;UBERON:0002405,2.05e-23,48;UBERON:0002390,4.50e-22,45;UBERON:0003061,4.50e-22,45;UBERON:0004177,3.64e-17,29;UBERON:0005057,3.64e-17,29;UBERON:0000077,3.92e-13,35;UBERON:0003408,4.61e-12,24;UBERON:0002370,5.18e-11,23;UBERON:0000974,5.18e-11,23;UBERON:0004807,5.18e-11,23;UBERON:0005058,5.18e-11,23;UBERON:0003351,5.18e-11,23;UBERON:0009113,5.18e-11,23;UBERON:0003295,5.18e-11,23;UBERON:0009722,5.18e-11,23;UBERON:0005562,5.18e-11,23;UBERON:0007690,5.18e-11,23;UBERON:0001041,1.91e-10,80;UBERON:0006562,2.24e-10,24;UBERON:0001557,2.24e-10,24;UBERON:0001042,2.24e-10,24;UBERON:0008814,2.24e-10,24;UBERON:0009145,2.24e-10,24;UBERON:0003081,4.23e-10,87;UBERON:0002384,8.79e-10,46;UBERON:0000072,9.24e-09,27;UBERON:0001004,2.79e-08,42;UBERON:0002106,3.12e-08,6;UBERON:0004457,3.12e-08,6;UBERON:0000042,3.12e-08,6;UBERON:0004854,3.12e-08,6;UBERON:0009034,3.12e-08,6;UBERON:0002095,3.12e-08,6;UBERON:0004782,3.12e-08,6;UBERON:0003281,3.12e-08,6;UBERON:0009664,3.12e-08,6;UBERON:0002296,3.12e-08,6;UBERON:0005602,3.12e-08,6;UBERON:0001179,3.12e-08,6;UBERON:0006293,3.12e-08,6;UBERON:0000945,1.31e-07,16;UBERON:0010039,1.31e-07,16;UBERON:0000065,1.61e-07,41;UBERON:0000926,6.57e-07,120;UBERON:0004120,6.57e-07,120;UBERON:0006603,6.57e-07,120;UBERON:0002204,8.36e-07,32|phase1_expression=0,0,0,0,0,0,0,4.00282302668886,0.281577444303333,0.468129052643987,2.05461561870606,1.35612670292072,3.25281386869291,4.63328132820686,1.66554880907831,2.63217847606774,0.699561878128147,9.46386496074713,9.32378148519024,3.81950686618227,0,2.28369187762036,2.08959831311148,1.27993938234725,0.91763712426868,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,25.1118978442145,16.4080422349998,16.7527598071615,30.5880373776127,30.0540013381716,18.4493934151838,0,0,0,0,0,0,0,0,0,5.20126078778983,2.90144856804538,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0,0.075726193333184,0,0.579728977403356,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,9.32176381129818,0.593768556259299,0.173485326766136,0,0,0.150722640552623,0.352766121407114,0,0,0,1.76922110389975,0.323533699894818,1.10420759230197,2.42437626567611,0,0,0,0.255457055208591,6.70964697233154,4.79922184794726,10.2926883929182,0,0,0,0.173824320192276,0.255715457330331,0,0,0.305518091550949,1.49288364732112,0,0,0.130120442962704,0,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0.696504333044333,0.411564272815887,0,9.83098462238529,6.94839349209731,10.2298859782413,0.207125772535502,0.234526059981096,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0.134206418760372,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0.232236671860439,0.77320476793256,0.605050573870028,0.444756087689741,1.14135375667535,0,1.4822905925161,0.754005626400808,0.198956472041151,0.58489226135736,1.79763881730844,0.216138049874694,0.995706366271836,0,0,0,0,0.193952487167626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| ||
|EntrezGene=243025 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=D3Z447 | |||
|association_with_transcript=-64bp_to_ENSMUST00000043352_5end | |||
|description=CAGE_peak_2_at_Tmem156_5end | |||
|id=chr5:65482858..65482876,- | |||
|ontology_enrichment_celltype=CL:0000988!7.14e-10!32;CL:0002032!7.14e-10!32;CL:0000037!7.14e-10!32;CL:0000566!7.14e-10!32;CL:0000837!7.14e-10!32;CL:0000838!3.94e-07!12;CL:0002031!7.03e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,6.47e-17,32;CL:0002032,6.47e-17,32;CL:0000037,6.47e-17,32;CL:0000837,6.47e-17,32;CL:0002031,1.16e-10,25;CL:0000838,5.70e-10,12;CL:0002320,8.79e-10,46;CL:0000134,8.79e-10,46;CL:0000049,3.93e-09,19;CL:0000542,5.14e-09,13;CL:0000051,5.14e-09,13;CL:0000084,9.57e-09,11;CL:0000827,9.57e-09,11;CL:0000738,1.31e-07,17;CL:0002087,1.31e-07,17;CL:0000219,1.93e-07,54;CL:0000791,8.72e-07,9;CL:0000789,8.72e-07,9;CL:0002420,8.72e-07,9;CL:0002419,8.72e-07,9;CL:0000790,8.72e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.47e-14!48;UBERON:0002390!3.90e-13!45;UBERON:0003061!3.90e-13!45;UBERON:0002405!9.63e-13!70;UBERON:0004177!5.25e-11!29;UBERON:0005057!8.87e-09!51;UBERON:0004119!2.81e-08!130;UBERON:0000925!2.81e-08!130;UBERON:0006595!2.81e-08!130;UBERON:0003408!2.91e-08!24;UBERON:0000077!4.08e-08!97;UBERON:0001007!6.09e-08!128;UBERON:0001555!6.09e-08!128;UBERON:0007026!6.09e-08!128;UBERON:0001041!7.95e-08!92;UBERON:0003081!1.02e-07!88;UBERON:0002370!1.10e-07!23;UBERON:0000974!1.10e-07!23;UBERON:0004807!1.10e-07!23;UBERON:0005058!1.10e-07!23;UBERON:0003351!1.10e-07!23;UBERON:0009113!1.10e-07!23;UBERON:0003295!1.10e-07!23;UBERON:0009722!1.10e-07!23;UBERON:0005562!1.10e-07!23;UBERON:0007690!1.10e-07!23;UBERON:0004921!2.16e-07!126;UBERON:0004185!2.16e-07!126;UBERON:0001004!4.76e-07!42;UBERON:0006562!5.30e-07!24;UBERON:0001557!5.30e-07!24;UBERON:0001042!5.30e-07!24;UBERON:0008814!5.30e-07!24;UBERON:0009145!5.30e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.05e-23,48;UBERON:0002405,2.05e-23,48;UBERON:0002390,4.50e-22,45;UBERON:0003061,4.50e-22,45;UBERON:0004177,3.64e-17,29;UBERON:0005057,3.64e-17,29;UBERON:0000077,3.92e-13,35;UBERON:0003408,4.61e-12,24;UBERON:0002370,5.18e-11,23;UBERON:0000974,5.18e-11,23;UBERON:0004807,5.18e-11,23;UBERON:0005058,5.18e-11,23;UBERON:0003351,5.18e-11,23;UBERON:0009113,5.18e-11,23;UBERON:0003295,5.18e-11,23;UBERON:0009722,5.18e-11,23;UBERON:0005562,5.18e-11,23;UBERON:0007690,5.18e-11,23;UBERON:0001041,1.91e-10,80;UBERON:0006562,2.24e-10,24;UBERON:0001557,2.24e-10,24;UBERON:0001042,2.24e-10,24;UBERON:0008814,2.24e-10,24;UBERON:0009145,2.24e-10,24;UBERON:0003081,4.23e-10,87;UBERON:0002384,8.79e-10,46;UBERON:0000072,9.24e-09,27;UBERON:0001004,2.79e-08,42;UBERON:0002106,3.12e-08,6;UBERON:0004457,3.12e-08,6;UBERON:0000042,3.12e-08,6;UBERON:0004854,3.12e-08,6;UBERON:0009034,3.12e-08,6;UBERON:0002095,3.12e-08,6;UBERON:0004782,3.12e-08,6;UBERON:0003281,3.12e-08,6;UBERON:0009664,3.12e-08,6;UBERON:0002296,3.12e-08,6;UBERON:0005602,3.12e-08,6;UBERON:0001179,3.12e-08,6;UBERON:0006293,3.12e-08,6;UBERON:0000945,1.31e-07,16;UBERON:0010039,1.31e-07,16;UBERON:0000065,1.61e-07,41;UBERON:0000926,6.57e-07,120;UBERON:0004120,6.57e-07,120;UBERON:0006603,6.57e-07,120;UBERON:0002204,8.36e-07,32 | |||
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|short_description=p2@Tmem156 | |||
}} |
Revision as of 07:50, 14 September 2013
Short description: | p2@Tmem156 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Tmem156_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -64bp_to_ENSMUST00000043352_5end |
EntrezGene: | Tmem156 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 6.47e-17 | 32 |
hematopoietic oligopotent progenitor cell | 6.47e-17 | 32 |
hematopoietic stem cell | 6.47e-17 | 32 |
hematopoietic multipotent progenitor cell | 6.47e-17 | 32 |
hematopoietic lineage restricted progenitor cell | 1.16e-10 | 25 |
lymphoid lineage restricted progenitor cell | 5.70e-10 | 12 |
connective tissue cell | 8.79e-10 | 46 |
mesenchymal cell | 8.79e-10 | 46 |
common myeloid progenitor | 3.93e-09 | 19 |
lymphocyte | 5.14e-09 | 13 |
common lymphoid progenitor | 5.14e-09 | 13 |
T cell | 9.57e-09 | 11 |
pro-T cell | 9.57e-09 | 11 |
leukocyte | 1.31e-07 | 17 |
nongranular leukocyte | 1.31e-07 | 17 |
motile cell | 1.93e-07 | 54 |
mature alpha-beta T cell | 8.72e-07 | 9 |
alpha-beta T cell | 8.72e-07 | 9 |
immature T cell | 8.72e-07 | 9 |
mature T cell | 8.72e-07 | 9 |
immature alpha-beta T cell | 8.72e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.