FFCP PHASE1:Hg19::chr9:135987675..135987681,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5900|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=9842|TSSclassifier=W|UniProt=B3KPK6|association_with_transcript=-180bp_to_AK056462_5end|coexpression_cluster_id=C26|description=CAGE_peak_8_at_RALGDS_5end|id=chr9:135987675..135987681,-|ontology_enrichment_celltype=CL:0002057!4.30e-89!42;CL:0000766!5.46e-83!76;CL:0000860!2.09e-82!45;CL:0002009!5.04e-75!65;CL:0000738!1.45e-70!140;CL:0002194!1.57e-70!63;CL:0000576!1.57e-70!63;CL:0000040!1.57e-70!63;CL:0000559!1.57e-70!63;CL:0000557!1.02e-67!71;CL:0000839!2.26e-62!70;CL:0000763!2.77e-59!112;CL:0000049!2.77e-59!112;CL:0000037!1.59e-56!172;CL:0000566!1.59e-56!172;CL:0002087!1.42e-53!119;CL:0000988!1.42e-52!182;CL:0002032!1.55e-49!165;CL:0000837!1.55e-49!165;CL:0002031!8.73e-49!124;CL:0000094!2.08e-21!8;CL:0000134!7.01e-21!358;CL:0002320!3.56e-20!365;CL:0000219!1.10e-17!390;CL:0000034!4.29e-16!444;CL:0000048!1.77e-15!430;CL:0000081!3.78e-15!11;CL:0000723!4.81e-15!436;CL:0002393!3.97e-10!9;CL:0002397!3.97e-10!9;CL:0000767!6.52e-09!3;CL:0000775!1.27e-08!3;CL:0000842!2.27e-08!3;CL:0000784!2.72e-08!3;CL:0000623!3.52e-08!3;CL:0000825!3.52e-08!3;CL:0000451!8.19e-08!10;CL:0000063!2.09e-07!578;CL:0002371!2.42e-07!591;CL:0000771!2.72e-07!2;CL:0000144!3.77e-07!625;CL:0000840!5.29e-07!5;CL:0001029!5.29e-07!5|ontology_enrichment_celltype_v019=CL:0000860;3.62e-98;33!CL:0002057;3.62e-98;33!CL:0000473;3.91e-71;39!CL:0000234;3.91e-71;39!CL:0000576;2.28e-54;48!CL:0000766;1.27e-41;69!CL:0000094;5.34e-31;8!CL:0000081;3.37e-22;11!CL:0000763;8.08e-21;100!CL:0002087;1.56e-14;104!CL:0000738;4.01e-14;136!CL:0000767;1.91e-12;3!CL:0000775;5.02e-12;3!CL:0000771;4.65e-10;2!CL:0001014;1.42e-08;2!CL:0001016;1.42e-08;2!CL:0000988;1.72e-07;177|ontology_enrichment_celltype_v019_2=CL:0000860,4.01e-101,42;CL:0002057,4.01e-101,42;CL:0000473,5.87e-93,48;CL:0000234,5.87e-93,48;CL:0000766,1.32e-91,72;CL:0002009,7.32e-79,61;CL:0002194,9.35e-73,59;CL:0000576,9.35e-73,59;CL:0000040,9.35e-73,59;CL:0000559,9.35e-73,59;CL:0000557,3.62e-71,67;CL:0000763,1.68e-64,108;CL:0000049,1.68e-64,108;CL:0000839,2.60e-64,66;CL:0000738,3.99e-57,136;CL:0000037,1.57e-44,168;CL:0000988,8.40e-42,177;CL:0002032,2.23e-40,161;CL:0000837,2.23e-40,161;CL:0002087,3.12e-38,115;CL:0002031,2.51e-36,120;CL:0000094,5.23e-31,8;CL:0000081,3.32e-22,11;CL:0000134,3.50e-16,354;CL:0002320,1.11e-15,361;CL:0000219,6.46e-14,386;CL:0000034,9.91e-13,441;CL:0000767,1.87e-12,3;CL:0000775,5.03e-12,3;CL:0000048,9.35e-12,427;CL:0000723,1.86e-11,433;CL:0000771,4.65e-10,2;CL:0001014,1.39e-08,2;CL:0001016,1.39e-08,2|ontology_enrichment_development_v019=CL:0002057;8.62e-75;42!CL:0000049;9.23e-18;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.68e-61!80;UBERON:0001474!2.23e-56!86;UBERON:0002390!1.31e-52!102;UBERON:0003061!1.31e-52!102;UBERON:0002193!8.88e-47!112;UBERON:0004765!3.24e-46!101;UBERON:0001434!3.24e-46!101;UBERON:0002405!4.13e-39!115;UBERON:0002204!2.06e-24!167;UBERON:0003081!3.23e-21!216;UBERON:0002384!3.28e-19!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.15e-62,76;UBERON:0001474,8.54e-57,82;UBERON:0002390,6.28e-52,98;UBERON:0003061,6.28e-52,98;UBERON:0004765,4.58e-51,90;UBERON:0002405,3.61e-49,93;UBERON:0002193,2.26e-46,108;UBERON:0001434,3.52e-45,100;UBERON:0002204,8.07e-24,167;UBERON:0003081,9.58e-21,203;UBERON:0002384,5.35e-15,371;UBERON:0000926,2.37e-10,315;UBERON:0004120,2.37e-10,315;UBERON:0006603,2.37e-10,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65401409067589,6.52509976765262,11.6112092487057,0,0,0,0,0,0,10.5259127621057,17.4473669299023,7.59538047505481,0,0,0,13.6674344452791,21.1610528465733,10.6736986922639,23.0104746536628,33.7157668177897,25.0862160425034,14.0969272237854,26.3845527724974,13.9524515634265,11.0318617835718,21.9464792418501,25.7310324529249,25.6009581777942,29.4738642062473,10.1125568000288,17.7528657575123,27.5998963285441,15.344091019177,10.8850929061616,24.3345662298391,14.9178662686443,13.6398342155434,15.8867862913519,11.8336227309159,19.8486445552827,28.1600775946909,24.3251506069731,9.6863920421339,27.2525450630798,14.2408074348398,0.845021145247767,0.425208599930087,0.628975936525128,0.44931452458598,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,2.24203425192614,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.953962497221368,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1697335795402,58.1670396222488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32501818449095,0,0,0,0,0,0,0,0.985153801009636,0.431255149719035,0.513372145118994,0,0,0,0,0,3.74503511973591,2.99161459204025,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,3.8828556147351,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69968669861801,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p8@RALGDS}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5900 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=9842 | |||
|TSSclassifier=W | |||
|UniProt=B3KPK6 | |||
|association_with_transcript=-180bp_to_AK056462_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_8_at_RALGDS_5end | |||
|id=chr9:135987675..135987681,- | |||
|ontology_enrichment_celltype=CL:0002057!4.30e-89!42;CL:0000766!5.46e-83!76;CL:0000860!2.09e-82!45;CL:0002009!5.04e-75!65;CL:0000738!1.45e-70!140;CL:0002194!1.57e-70!63;CL:0000576!1.57e-70!63;CL:0000040!1.57e-70!63;CL:0000559!1.57e-70!63;CL:0000557!1.02e-67!71;CL:0000839!2.26e-62!70;CL:0000763!2.77e-59!112;CL:0000049!2.77e-59!112;CL:0000037!1.59e-56!172;CL:0000566!1.59e-56!172;CL:0002087!1.42e-53!119;CL:0000988!1.42e-52!182;CL:0002032!1.55e-49!165;CL:0000837!1.55e-49!165;CL:0002031!8.73e-49!124;CL:0000094!2.08e-21!8;CL:0000134!7.01e-21!358;CL:0002320!3.56e-20!365;CL:0000219!1.10e-17!390;CL:0000034!4.29e-16!444;CL:0000048!1.77e-15!430;CL:0000081!3.78e-15!11;CL:0000723!4.81e-15!436;CL:0002393!3.97e-10!9;CL:0002397!3.97e-10!9;CL:0000767!6.52e-09!3;CL:0000775!1.27e-08!3;CL:0000842!2.27e-08!3;CL:0000784!2.72e-08!3;CL:0000623!3.52e-08!3;CL:0000825!3.52e-08!3;CL:0000451!8.19e-08!10;CL:0000063!2.09e-07!578;CL:0002371!2.42e-07!591;CL:0000771!2.72e-07!2;CL:0000144!3.77e-07!625;CL:0000840!5.29e-07!5;CL:0001029!5.29e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.62e-98;33!CL:0002057;3.62e-98;33!CL:0000473;3.91e-71;39!CL:0000234;3.91e-71;39!CL:0000576;2.28e-54;48!CL:0000766;1.27e-41;69!CL:0000094;5.34e-31;8!CL:0000081;3.37e-22;11!CL:0000763;8.08e-21;100!CL:0002087;1.56e-14;104!CL:0000738;4.01e-14;136!CL:0000767;1.91e-12;3!CL:0000775;5.02e-12;3!CL:0000771;4.65e-10;2!CL:0001014;1.42e-08;2!CL:0001016;1.42e-08;2!CL:0000988;1.72e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.01e-101,42;CL:0002057,4.01e-101,42;CL:0000473,5.87e-93,48;CL:0000234,5.87e-93,48;CL:0000766,1.32e-91,72;CL:0002009,7.32e-79,61;CL:0002194,9.35e-73,59;CL:0000576,9.35e-73,59;CL:0000040,9.35e-73,59;CL:0000559,9.35e-73,59;CL:0000557,3.62e-71,67;CL:0000763,1.68e-64,108;CL:0000049,1.68e-64,108;CL:0000839,2.60e-64,66;CL:0000738,3.99e-57,136;CL:0000037,1.57e-44,168;CL:0000988,8.40e-42,177;CL:0002032,2.23e-40,161;CL:0000837,2.23e-40,161;CL:0002087,3.12e-38,115;CL:0002031,2.51e-36,120;CL:0000094,5.23e-31,8;CL:0000081,3.32e-22,11;CL:0000134,3.50e-16,354;CL:0002320,1.11e-15,361;CL:0000219,6.46e-14,386;CL:0000034,9.91e-13,441;CL:0000767,1.87e-12,3;CL:0000775,5.03e-12,3;CL:0000048,9.35e-12,427;CL:0000723,1.86e-11,433;CL:0000771,4.65e-10,2;CL:0001014,1.39e-08,2;CL:0001016,1.39e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;8.62e-75;42!CL:0000049;9.23e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.68e-61!80;UBERON:0001474!2.23e-56!86;UBERON:0002390!1.31e-52!102;UBERON:0003061!1.31e-52!102;UBERON:0002193!8.88e-47!112;UBERON:0004765!3.24e-46!101;UBERON:0001434!3.24e-46!101;UBERON:0002405!4.13e-39!115;UBERON:0002204!2.06e-24!167;UBERON:0003081!3.23e-21!216;UBERON:0002384!3.28e-19!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.15e-62,76;UBERON:0001474,8.54e-57,82;UBERON:0002390,6.28e-52,98;UBERON:0003061,6.28e-52,98;UBERON:0004765,4.58e-51,90;UBERON:0002405,3.61e-49,93;UBERON:0002193,2.26e-46,108;UBERON:0001434,3.52e-45,100;UBERON:0002204,8.07e-24,167;UBERON:0003081,9.58e-21,203;UBERON:0002384,5.35e-15,371;UBERON:0000926,2.37e-10,315;UBERON:0004120,2.37e-10,315;UBERON:0006603,2.37e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65401409067589,6.52509976765262,11.6112092487057,0,0,0,0,0,0,10.5259127621057,17.4473669299023,7.59538047505481,0,0,0,13.6674344452791,21.1610528465733,10.6736986922639,23.0104746536628,33.7157668177897,25.0862160425034,14.0969272237854,26.3845527724974,13.9524515634265,11.0318617835718,21.9464792418501,25.7310324529249,25.6009581777942,29.4738642062473,10.1125568000288,17.7528657575123,27.5998963285441,15.344091019177,10.8850929061616,24.3345662298391,14.9178662686443,13.6398342155434,15.8867862913519,11.8336227309159,19.8486445552827,28.1600775946909,24.3251506069731,9.6863920421339,27.2525450630798,14.2408074348398,0.845021145247767,0.425208599930087,0.628975936525128,0.44931452458598,0.300353785683013,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,1.32171328579026,2.24203425192614,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.953962497221368,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.1697335795402,58.1670396222488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32501818449095,0,0,0,0,0,0,0,0.985153801009636,0.431255149719035,0.513372145118994,0,0,0,0,0,3.74503511973591,2.99161459204025,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,3.8828556147351,1.921096040462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69968669861801,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@RALGDS | |||
}} |
Revision as of 07:59, 14 September 2013
Short description: | p8@RALGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_RALGDS_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -180bp_to_AK056462_5end |
EntrezGene: | RALGDS |
HGNC: | 9842 |
UniProt: | B3KPK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.15e-62 | 76 |
bone element | 8.54e-57 | 82 |
hematopoietic system | 6.28e-52 | 98 |
blood island | 6.28e-52 | 98 |
skeletal element | 4.58e-51 | 90 |
immune system | 3.61e-49 | 93 |
hemolymphoid system | 2.26e-46 | 108 |
skeletal system | 3.52e-45 | 100 |
musculoskeletal system | 8.07e-24 | 167 |
lateral plate mesoderm | 9.58e-21 | 203 |
connective tissue | 5.35e-15 | 371 |
mesoderm | 2.37e-10 | 315 |
mesoderm-derived structure | 2.37e-10 | 315 |
presumptive mesoderm | 2.37e-10 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.