FFCP PHASE1:Mm9::chr6:41508390..41508413,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=33|UniProt=|association_with_transcript=-20bp_to_ENSMUST00000103300_5end|description=CAGE_peak_1_at_ENSMUST00000103300_5end|id=chr6:41508390..41508413,-|ontology_enrichment_celltype=CL:0000838!4.80e-11!12;CL:0000084!1.00e-10!11;CL:0000827!1.00e-10!11;CL:0000542!8.29e-10!13;CL:0000051!8.29e-10!13;CL:0000791!2.09e-09!9;CL:0000789!2.09e-09!9;CL:0002420!2.09e-09!9;CL:0002419!2.09e-09!9;CL:0000790!2.09e-09!9;CL:0000624!1.24e-08!8;CL:0000988!6.17e-07!32;CL:0002032!6.17e-07!32;CL:0000037!6.17e-07!32;CL:0000566!6.17e-07!32;CL:0000837!6.17e-07!32;CL:0000893!7.73e-07!6;CL:0002489!7.73e-07!6;CL:0000898!7.73e-07!6;CL:0000809!7.73e-07!6;CL:0000810!7.73e-07!6;CL:0000895!7.73e-07!6;CL:0000808!7.73e-07!6;CL:0000894!7.73e-07!6;CL:0000806!7.73e-07!6;CL:0000807!7.73e-07!6;CL:0000805!7.73e-07!6;CL:0002425!7.73e-07!6;CL:0002436!7.73e-07!6;CL:0002427!7.73e-07!6;CL:0002428!7.73e-07!6;CL:0002429!7.73e-07!6;CL:0002433!7.73e-07!6;CL:0002431!7.73e-07!6;CL:0002432!7.73e-07!6|ontology_enrichment_celltype_v019_2=CL:0000084,1.24e-19,11;CL:0000827,1.24e-19,11;CL:0000838,9.35e-18,12;CL:0000791,4.96e-17,9;CL:0000789,4.96e-17,9;CL:0002420,4.96e-17,9;CL:0002419,4.96e-17,9;CL:0000790,4.96e-17,9;CL:0000542,3.63e-16,13;CL:0000051,3.63e-16,13;CL:0000624,1.66e-15,8;CL:0002031,1.57e-13,25;CL:0000893,5.58e-12,6;CL:0002489,5.58e-12,6;CL:0000898,5.58e-12,6;CL:0000809,5.58e-12,6;CL:0000810,5.58e-12,6;CL:0000895,5.58e-12,6;CL:0000808,5.58e-12,6;CL:0000894,5.58e-12,6;CL:0000806,5.58e-12,6;CL:0000807,5.58e-12,6;CL:0000805,5.58e-12,6;CL:0002425,5.58e-12,6;CL:0002436,5.58e-12,6;CL:0002427,5.58e-12,6;CL:0002428,5.58e-12,6;CL:0002429,5.58e-12,6;CL:0002433,5.58e-12,6;CL:0002431,5.58e-12,6;CL:0002432,5.58e-12,6;CL:0000738,1.08e-11,17;CL:0002087,1.08e-11,17;CL:0000988,4.34e-11,32;CL:0002032,4.34e-11,32;CL:0000037,4.34e-11,32;CL:0000837,4.34e-11,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!9.77e-17!42;UBERON:0000065!3.04e-16!41;UBERON:0004177!8.57e-16!29;UBERON:0003408!1.91e-15!24;UBERON:0006562!3.98e-15!24;UBERON:0001557!3.98e-15!24;UBERON:0001042!3.98e-15!24;UBERON:0008814!3.98e-15!24;UBERON:0009145!3.98e-15!24;UBERON:0002370!5.53e-15!23;UBERON:0000974!5.53e-15!23;UBERON:0004807!5.53e-15!23;UBERON:0005058!5.53e-15!23;UBERON:0003351!5.53e-15!23;UBERON:0009113!5.53e-15!23;UBERON:0003295!5.53e-15!23;UBERON:0009722!5.53e-15!23;UBERON:0005562!5.53e-15!23;UBERON:0007690!5.53e-15!23;UBERON:0000072!1.58e-14!27;UBERON:0002193!5.58e-13!48;UBERON:0002390!1.82e-11!45;UBERON:0003061!1.82e-11!45;UBERON:0000063!4.68e-10!35;UBERON:0005057!1.65e-08!51;UBERON:0002405!1.86e-08!70;UBERON:0001041!1.35e-07!92;UBERON:0003081!2.26e-07!88;UBERON:0000077!7.00e-07!97;UBERON:0001007!9.83e-07!128;UBERON:0001555!9.83e-07!128;UBERON:0007026!9.83e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.39e-32,29;UBERON:0005057,1.39e-32,29;UBERON:0002370,6.17e-30,23;UBERON:0000974,6.17e-30,23;UBERON:0004807,6.17e-30,23;UBERON:0005058,6.17e-30,23;UBERON:0003351,6.17e-30,23;UBERON:0009113,6.17e-30,23;UBERON:0003295,6.17e-30,23;UBERON:0009722,6.17e-30,23;UBERON:0005562,6.17e-30,23;UBERON:0007690,6.17e-30,23;UBERON:0006562,1.95e-28,24;UBERON:0003408,1.95e-28,24;UBERON:0001557,1.95e-28,24;UBERON:0001042,1.95e-28,24;UBERON:0008814,1.95e-28,24;UBERON:0009145,1.95e-28,24;UBERON:0002193,6.57e-28,48;UBERON:0002405,6.57e-28,48;UBERON:0002390,3.65e-26,45;UBERON:0003061,3.65e-26,45;UBERON:0000077,8.77e-26,35;UBERON:0000072,1.31e-24,27;UBERON:0000065,1.70e-22,41;UBERON:0001004,8.63e-22,42;UBERON:0007811,5.53e-17,36;UBERON:0000153,2.76e-13,43;UBERON:0001041,5.37e-13,80;UBERON:0005911,1.50e-11,69;UBERON:0003081,1.10e-10,87;UBERON:0003929,3.42e-10,55;UBERON:0002368,7.09e-09,60;UBERON:0000949,5.57e-08,72;UBERON:0002530,8.98e-08,65;UBERON:0000490,1.42e-07,66;UBERON:0001007,3.22e-07,116;UBERON:0001555,3.22e-07,116;UBERON:0007026,3.22e-07,116;UBERON:0004119,5.71e-07,118;UBERON:0000925,5.71e-07,118;UBERON:0006595,5.71e-07,118;UBERON:0004921,7.54e-07,114|phase1_expression=0,0,0,0,0,0,0,203.756604390807,113.757287498547,145.120006319636,64.3779560527899,59.1111698155443,146.034222631318,183.670265482314,0,2.02475267389826,0,8.20201629931418,5.89592064504677,2.54633791078818,2.38121212422995,2.38298282882125,2.08959831311148,0.319984845586813,1.14704640533585,0,0,0,0.760093677825496,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0.503347818173209,85.5927327573386,24.1987535382574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,2.51204535381932,11.3932668804756,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0,0.484875253135222,0,0,0,0.766371165625774,1.91704199209472,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0,0,0,0,0,0.196764231747404,0,0,0,0.817357396570186,0.16455984991348,0.164167464079095,0.56748166682099,1.46199987425332,0.658650345873152,0.268412837520744,0,0,0.660837565967596,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,1.66277871149944,0,0,0,0,1.67506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.637819074629948,1.3109065177259,2.07221978239075,1.59113964439663,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,1.06949213515416,1.26414703174326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0.328281799490123,0.291480836629851,0,4.61351378154202,0,0,1.13021074202815,2.32380187125743,5.0331198105435,2.37969801991397,1.6794174278839,2.48759952847963,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,127.984503854412,1.62180172232131,4.82741498674688,28.0628977632037,50.8435815695647,79.2738605577247,89.4254144428568,99.0996727341413,93.1920333021403,81.9223171541248,92.6592641407564,106.521463648549,121.226920466815,152.874988053492,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0,0.37456602987953,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,1.0174249164263,0.188218760830661,0.423073039458382,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.309873682371932,0.771626443924566,0,1.40358965067245,1.50409737833809,0,0.441182838239031,0.231867835620421|short_description=p1@ENSMUST00000103300}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_ENSMUST00000103300_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103300_5end | |||
|id=chr6:41508390..41508413,- | |||
|ontology_enrichment_celltype=CL:0000838!4.80e-11!12;CL:0000084!1.00e-10!11;CL:0000827!1.00e-10!11;CL:0000542!8.29e-10!13;CL:0000051!8.29e-10!13;CL:0000791!2.09e-09!9;CL:0000789!2.09e-09!9;CL:0002420!2.09e-09!9;CL:0002419!2.09e-09!9;CL:0000790!2.09e-09!9;CL:0000624!1.24e-08!8;CL:0000988!6.17e-07!32;CL:0002032!6.17e-07!32;CL:0000037!6.17e-07!32;CL:0000566!6.17e-07!32;CL:0000837!6.17e-07!32;CL:0000893!7.73e-07!6;CL:0002489!7.73e-07!6;CL:0000898!7.73e-07!6;CL:0000809!7.73e-07!6;CL:0000810!7.73e-07!6;CL:0000895!7.73e-07!6;CL:0000808!7.73e-07!6;CL:0000894!7.73e-07!6;CL:0000806!7.73e-07!6;CL:0000807!7.73e-07!6;CL:0000805!7.73e-07!6;CL:0002425!7.73e-07!6;CL:0002436!7.73e-07!6;CL:0002427!7.73e-07!6;CL:0002428!7.73e-07!6;CL:0002429!7.73e-07!6;CL:0002433!7.73e-07!6;CL:0002431!7.73e-07!6;CL:0002432!7.73e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.24e-19,11;CL:0000827,1.24e-19,11;CL:0000838,9.35e-18,12;CL:0000791,4.96e-17,9;CL:0000789,4.96e-17,9;CL:0002420,4.96e-17,9;CL:0002419,4.96e-17,9;CL:0000790,4.96e-17,9;CL:0000542,3.63e-16,13;CL:0000051,3.63e-16,13;CL:0000624,1.66e-15,8;CL:0002031,1.57e-13,25;CL:0000893,5.58e-12,6;CL:0002489,5.58e-12,6;CL:0000898,5.58e-12,6;CL:0000809,5.58e-12,6;CL:0000810,5.58e-12,6;CL:0000895,5.58e-12,6;CL:0000808,5.58e-12,6;CL:0000894,5.58e-12,6;CL:0000806,5.58e-12,6;CL:0000807,5.58e-12,6;CL:0000805,5.58e-12,6;CL:0002425,5.58e-12,6;CL:0002436,5.58e-12,6;CL:0002427,5.58e-12,6;CL:0002428,5.58e-12,6;CL:0002429,5.58e-12,6;CL:0002433,5.58e-12,6;CL:0002431,5.58e-12,6;CL:0002432,5.58e-12,6;CL:0000738,1.08e-11,17;CL:0002087,1.08e-11,17;CL:0000988,4.34e-11,32;CL:0002032,4.34e-11,32;CL:0000037,4.34e-11,32;CL:0000837,4.34e-11,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!9.77e-17!42;UBERON:0000065!3.04e-16!41;UBERON:0004177!8.57e-16!29;UBERON:0003408!1.91e-15!24;UBERON:0006562!3.98e-15!24;UBERON:0001557!3.98e-15!24;UBERON:0001042!3.98e-15!24;UBERON:0008814!3.98e-15!24;UBERON:0009145!3.98e-15!24;UBERON:0002370!5.53e-15!23;UBERON:0000974!5.53e-15!23;UBERON:0004807!5.53e-15!23;UBERON:0005058!5.53e-15!23;UBERON:0003351!5.53e-15!23;UBERON:0009113!5.53e-15!23;UBERON:0003295!5.53e-15!23;UBERON:0009722!5.53e-15!23;UBERON:0005562!5.53e-15!23;UBERON:0007690!5.53e-15!23;UBERON:0000072!1.58e-14!27;UBERON:0002193!5.58e-13!48;UBERON:0002390!1.82e-11!45;UBERON:0003061!1.82e-11!45;UBERON:0000063!4.68e-10!35;UBERON:0005057!1.65e-08!51;UBERON:0002405!1.86e-08!70;UBERON:0001041!1.35e-07!92;UBERON:0003081!2.26e-07!88;UBERON:0000077!7.00e-07!97;UBERON:0001007!9.83e-07!128;UBERON:0001555!9.83e-07!128;UBERON:0007026!9.83e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,1.39e-32,29;UBERON:0005057,1.39e-32,29;UBERON:0002370,6.17e-30,23;UBERON:0000974,6.17e-30,23;UBERON:0004807,6.17e-30,23;UBERON:0005058,6.17e-30,23;UBERON:0003351,6.17e-30,23;UBERON:0009113,6.17e-30,23;UBERON:0003295,6.17e-30,23;UBERON:0009722,6.17e-30,23;UBERON:0005562,6.17e-30,23;UBERON:0007690,6.17e-30,23;UBERON:0006562,1.95e-28,24;UBERON:0003408,1.95e-28,24;UBERON:0001557,1.95e-28,24;UBERON:0001042,1.95e-28,24;UBERON:0008814,1.95e-28,24;UBERON:0009145,1.95e-28,24;UBERON:0002193,6.57e-28,48;UBERON:0002405,6.57e-28,48;UBERON:0002390,3.65e-26,45;UBERON:0003061,3.65e-26,45;UBERON:0000077,8.77e-26,35;UBERON:0000072,1.31e-24,27;UBERON:0000065,1.70e-22,41;UBERON:0001004,8.63e-22,42;UBERON:0007811,5.53e-17,36;UBERON:0000153,2.76e-13,43;UBERON:0001041,5.37e-13,80;UBERON:0005911,1.50e-11,69;UBERON:0003081,1.10e-10,87;UBERON:0003929,3.42e-10,55;UBERON:0002368,7.09e-09,60;UBERON:0000949,5.57e-08,72;UBERON:0002530,8.98e-08,65;UBERON:0000490,1.42e-07,66;UBERON:0001007,3.22e-07,116;UBERON:0001555,3.22e-07,116;UBERON:0007026,3.22e-07,116;UBERON:0004119,5.71e-07,118;UBERON:0000925,5.71e-07,118;UBERON:0006595,5.71e-07,118;UBERON:0004921,7.54e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,203.756604390807,113.757287498547,145.120006319636,64.3779560527899,59.1111698155443,146.034222631318,183.670265482314,0,2.02475267389826,0,8.20201629931418,5.89592064504677,2.54633791078818,2.38121212422995,2.38298282882125,2.08959831311148,0.319984845586813,1.14704640533585,0,0,0,0.760093677825496,0.504060259519861,0.886922042621219,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0,0,0,0,0.503347818173209,85.5927327573386,24.1987535382574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.08977724289854,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,2.51204535381932,11.3932668804756,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0,0.484875253135222,0,0,0,0.766371165625774,1.91704199209472,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0.51469581422943,0,0,0,0,0,0.196764231747404,0,0,0,0.817357396570186,0.16455984991348,0.164167464079095,0.56748166682099,1.46199987425332,0.658650345873152,0.268412837520744,0,0,0.660837565967596,0.528901133327089,0,0,0.128867461322093,0,0,0,0,0,0.502670417600539,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,1.43768206527355,0.372140947668503,0.624075346229121,0.252578877947112,0.179397413521912,0,1.66277871149944,0,0,0,0,1.67506257441816,0.238043640886014,0.390267295715598,0.315270288212382,0.44292937929755,0.637819074629948,1.3109065177259,2.07221978239075,1.59113964439663,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,1.06949213515416,1.26414703174326,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0.328281799490123,0.291480836629851,0,4.61351378154202,0,0,1.13021074202815,2.32380187125743,5.0331198105435,2.37969801991397,1.6794174278839,2.48759952847963,0,0,0,0,0.209088296014469,0,0,0.165306911450672,0,0,0.621339313086926,0,0,0,0,0,0.168956125490778,0,0,0,0,0,127.984503854412,1.62180172232131,4.82741498674688,28.0628977632037,50.8435815695647,79.2738605577247,89.4254144428568,99.0996727341413,93.1920333021403,81.9223171541248,92.6592641407564,106.521463648549,121.226920466815,152.874988053492,0.226730383615211,0,0,0,0,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0,0.37456602987953,0.256100609619477,0.114870937911227,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0.532427418478012,0.238436189947321,1.0174249164263,0.188218760830661,0.423073039458382,0,0.263069711437843,0.135804113845862,0,0.237270036248348,0,0,0.309873682371932,0.771626443924566,0,1.40358965067245,1.50409737833809,0,0.441182838239031,0.231867835620421 | |||
|short_description=p1@ENSMUST00000103300 | |||
}} |
Revision as of 09:57, 14 September 2013
Short description: | p1@ENSMUST00000103300 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103300_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -20bp_to_ENSMUST00000103300_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.