FFCP PHASE1:Mm9::chr6:6821621..6821635,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=184|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:6821621..6821635,-|id=chr6:6821621..6821635,-|ontology_enrichment_celltype=CL:0002609!4.01e-08!6|ontology_enrichment_celltype_v019_2=CL:0002609,5.65e-10,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002780!3.18e-17!39;UBERON:0001890!3.18e-17!39;UBERON:0006240!3.18e-17!39;UBERON:0003080!1.47e-16!40;UBERON:0002791!8.50e-16!29;UBERON:0003528!8.50e-16!29;UBERON:0001893!8.50e-16!29;UBERON:0000955!7.67e-15!50;UBERON:0006238!7.67e-15!50;UBERON:0002616!6.87e-14!49;UBERON:0003056!1.00e-13!49;UBERON:0002020!2.18e-12!34;UBERON:0000033!4.32e-12!63;UBERON:0001049!1.24e-11!52;UBERON:0005068!1.24e-11!52;UBERON:0006241!1.24e-11!52;UBERON:0007135!1.24e-11!52;UBERON:0000956!2.84e-11!21;UBERON:0001869!2.84e-11!21;UBERON:0000203!2.84e-11!21;UBERON:0001017!9.08e-10!73;UBERON:0005743!9.08e-10!73;UBERON:0000073!3.05e-09!75;UBERON:0001016!3.05e-09!75;UBERON:0002619!4.07e-08!17;UBERON:0000369!1.74e-07!5;UBERON:0002435!1.74e-07!5;UBERON:0000204!1.74e-07!5;UBERON:0010082!1.74e-07!5;UBERON:0002346!2.06e-07!71;UBERON:0003075!2.06e-07!71;UBERON:0007284!2.06e-07!71;UBERON:0007811!8.58e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.02e-13,39;UBERON:0001890,2.02e-13,39;UBERON:0006240,2.02e-13,39;UBERON:0003080,6.25e-13,40;UBERON:0000955,1.47e-12,47;UBERON:0006238,1.47e-12,47;UBERON:0003528,8.40e-12,29;UBERON:0002791,8.40e-12,29;UBERON:0001893,8.40e-12,29;UBERON:0002616,1.62e-11,46;UBERON:0001049,1.80e-09,52;UBERON:0005068,1.80e-09,52;UBERON:0006241,1.80e-09,52;UBERON:0007135,1.80e-09,52;UBERON:0003056,1.90e-09,49;UBERON:0002020,2.25e-09,34;UBERON:0000369,3.69e-09,5;UBERON:0002435,3.69e-09,5;UBERON:0000204,3.69e-09,5;UBERON:0010082,3.69e-09,5;UBERON:0000073,6.76e-09,54;UBERON:0002420,2.90e-07,8;UBERON:0007245,2.90e-07,8;UBERON:0010009,2.90e-07,8;UBERON:0010011,2.90e-07,8;UBERON:0000454,2.90e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,2.90330914463737,4.05017814995072,1.89292465216244,0,0,108.894320502094,119.423456888723,91.9218786610021,0,0,0.46081959976873,12.265424758908,6.58711033937349,14.5855743755893,0,0,1.83357897332172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03250663100489,19.6020789296068,0.869121600961382,1.27857728665165,1.0389402227978,1.62241263067758,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,5.86556290561921,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,15.1021018718249,0,0,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,6.84232157318979,2.32845630808958,1.07168517515796,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21991680276109,1.72808545314882,2.50905955217362,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,1.37016503954128,0,0,0.45032120322422,0.453142408984205,1.03552062350364,4.15149390336707,11.1726964552289,11.2684179797729,4.37592090722929,3.35381060204772,0.919217542250071,2.00022055021454,2.26638562962784,2.88827288632634,1.76888048234658,2.5347929989024,3.2066478035633,2.80924522409647,2.43295579138503,1.78049953762401,2.38146845641537,2.20180219295225,1.35036454324594,2.47251540481984,3.09117732282234,5.14303878578123,1.95223386775271,2.86123427936785,4.0696996657052,2.82328141245992,2.876896668317,2.56099162021882,1.57841826862706,2.44447404922551,1.68342681497322,1.89816028998679,0.689531376628944,2.45538625901814,3.56354734727722,2.12197272079256,3.74715866906919,1.87145286756327,1.28922632428979,0,0,0|short_description=p@chr6:6821621..6821635,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:6821621..6821635,- | |||
|id=chr6:6821621..6821635,- | |||
|ontology_enrichment_celltype=CL:0002609!4.01e-08!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,5.65e-10,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!3.18e-17!39;UBERON:0001890!3.18e-17!39;UBERON:0006240!3.18e-17!39;UBERON:0003080!1.47e-16!40;UBERON:0002791!8.50e-16!29;UBERON:0003528!8.50e-16!29;UBERON:0001893!8.50e-16!29;UBERON:0000955!7.67e-15!50;UBERON:0006238!7.67e-15!50;UBERON:0002616!6.87e-14!49;UBERON:0003056!1.00e-13!49;UBERON:0002020!2.18e-12!34;UBERON:0000033!4.32e-12!63;UBERON:0001049!1.24e-11!52;UBERON:0005068!1.24e-11!52;UBERON:0006241!1.24e-11!52;UBERON:0007135!1.24e-11!52;UBERON:0000956!2.84e-11!21;UBERON:0001869!2.84e-11!21;UBERON:0000203!2.84e-11!21;UBERON:0001017!9.08e-10!73;UBERON:0005743!9.08e-10!73;UBERON:0000073!3.05e-09!75;UBERON:0001016!3.05e-09!75;UBERON:0002619!4.07e-08!17;UBERON:0000369!1.74e-07!5;UBERON:0002435!1.74e-07!5;UBERON:0000204!1.74e-07!5;UBERON:0010082!1.74e-07!5;UBERON:0002346!2.06e-07!71;UBERON:0003075!2.06e-07!71;UBERON:0007284!2.06e-07!71;UBERON:0007811!8.58e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.02e-13,39;UBERON:0001890,2.02e-13,39;UBERON:0006240,2.02e-13,39;UBERON:0003080,6.25e-13,40;UBERON:0000955,1.47e-12,47;UBERON:0006238,1.47e-12,47;UBERON:0003528,8.40e-12,29;UBERON:0002791,8.40e-12,29;UBERON:0001893,8.40e-12,29;UBERON:0002616,1.62e-11,46;UBERON:0001049,1.80e-09,52;UBERON:0005068,1.80e-09,52;UBERON:0006241,1.80e-09,52;UBERON:0007135,1.80e-09,52;UBERON:0003056,1.90e-09,49;UBERON:0002020,2.25e-09,34;UBERON:0000369,3.69e-09,5;UBERON:0002435,3.69e-09,5;UBERON:0000204,3.69e-09,5;UBERON:0010082,3.69e-09,5;UBERON:0000073,6.76e-09,54;UBERON:0002420,2.90e-07,8;UBERON:0007245,2.90e-07,8;UBERON:0010009,2.90e-07,8;UBERON:0010011,2.90e-07,8;UBERON:0000454,2.90e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.768436610643109,2.90330914463737,4.05017814995072,1.89292465216244,0,0,108.894320502094,119.423456888723,91.9218786610021,0,0,0.46081959976873,12.265424758908,6.58711033937349,14.5855743755893,0,0,1.83357897332172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.03250663100489,19.6020789296068,0.869121600961382,1.27857728665165,1.0389402227978,1.62241263067758,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36463917702604,5.86556290561921,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0.222798674082394,0.283076530788832,0,0,0,15.1021018718249,0,0,0,0,0,0.242780636154981,0.604647113929502,0.188605079755898,0,0,0,0,0,0,0,0,0,6.84232157318979,2.32845630808958,1.07168517515796,0.177340233642274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21991680276109,1.72808545314882,2.50905955217362,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,0.515559547031063,1.37016503954128,0,0,0.45032120322422,0.453142408984205,1.03552062350364,4.15149390336707,11.1726964552289,11.2684179797729,4.37592090722929,3.35381060204772,0.919217542250071,2.00022055021454,2.26638562962784,2.88827288632634,1.76888048234658,2.5347929989024,3.2066478035633,2.80924522409647,2.43295579138503,1.78049953762401,2.38146845641537,2.20180219295225,1.35036454324594,2.47251540481984,3.09117732282234,5.14303878578123,1.95223386775271,2.86123427936785,4.0696996657052,2.82328141245992,2.876896668317,2.56099162021882,1.57841826862706,2.44447404922551,1.68342681497322,1.89816028998679,0.689531376628944,2.45538625901814,3.56354734727722,2.12197272079256,3.74715866906919,1.87145286756327,1.28922632428979,0,0,0 | |||
|short_description=p@chr6:6821621..6821635,- | |||
}} |
Revision as of 10:28, 14 September 2013
Short description: | p@chr6:6821621..6821635, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:6821621..6821635, - |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 5.65e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 2.02e-13 | 39 |
forebrain | 2.02e-13 | 39 |
future forebrain | 2.02e-13 | 39 |
anterior neural tube | 6.25e-13 | 40 |
brain | 1.47e-12 | 47 |
future brain | 1.47e-12 | 47 |
brain grey matter | 8.40e-12 | 29 |
regional part of telencephalon | 8.40e-12 | 29 |
telencephalon | 8.40e-12 | 29 |
regional part of brain | 1.62e-11 | 46 |
neural tube | 1.80e-09 | 52 |
neural rod | 1.80e-09 | 52 |
future spinal cord | 1.80e-09 | 52 |
neural keel | 1.80e-09 | 52 |
pre-chordal neural plate | 1.90e-09 | 49 |
gray matter | 2.25e-09 | 34 |
corpus striatum | 3.69e-09 | 5 |
striatum | 3.69e-09 | 5 |
ventral part of telencephalon | 3.69e-09 | 5 |
future corpus striatum | 3.69e-09 | 5 |
regional part of nervous system | 6.76e-09 | 54 |
basal ganglion | 2.90e-07 | 8 |
nuclear complex of neuraxis | 2.90e-07 | 8 |
aggregate regional part of brain | 2.90e-07 | 8 |
collection of basal ganglia | 2.90e-07 | 8 |
cerebral subcortex | 2.90e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.