FFCP PHASE1:Hg19::chr1:158801181..158801192,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4332 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7183 | |||
|TSSclassifier=strong | |||
|UniProt=P41218,Q5VUU6 | |||
|association_with_transcript=13bp_to_NM_002432,uc001fsz.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_3_at_MNDA_5end | |||
|id=chr1:158801181..158801192,+ | |||
|ontology_enrichment_celltype=CL:0000766!9.72e-63!76;CL:0002194!1.54e-56!63;CL:0000576!1.54e-56!63;CL:0000040!1.54e-56!63;CL:0000559!1.54e-56!63;CL:0002009!1.88e-56!65;CL:0002057!4.73e-52!42;CL:0000763!2.30e-50!112;CL:0000049!2.30e-50!112;CL:0000557!3.27e-50!71;CL:0000738!1.14e-49!140;CL:0000839!3.56e-49!70;CL:0000860!1.24e-47!45;CL:0000037!1.17e-43!172;CL:0000566!1.17e-43!172;CL:0002087!1.66e-42!119;CL:0002032!4.94e-42!165;CL:0000837!4.94e-42!165;CL:0000988!7.28e-40!182;CL:0002031!1.47e-36!124;CL:0002393!1.29e-14!9;CL:0002397!1.29e-14!9;CL:0000094!3.36e-13!8;CL:0000081!4.55e-09!11;CL:0000134!7.02e-09!358;CL:0002320!2.51e-08!365;CL:0000990!6.44e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-53;33!CL:0002057;1.02e-53;33!CL:0000576;2.14e-48;48!CL:0000473;7.11e-46;39!CL:0000234;7.11e-46;39!CL:0000766;1.29e-35;69!CL:0000763;9.80e-17;100!CL:0002393;1.12e-15;6!CL:0002397;1.12e-15;6!CL:0000775;2.45e-13;3!CL:0002087;9.05e-13;104!CL:0000094;9.29e-13;8!CL:0000875;3.77e-12;3!CL:0002396;3.77e-12;3!CL:0000738;4.54e-11;136!CL:0000081;3.59e-09;11!CL:0000771;5.00e-09;2!CL:0000988;2.32e-07;177!CL:0000219;9.83e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.89e-83,42;CL:0002057,2.89e-83,42;CL:0000473,1.89e-81,48;CL:0000234,1.89e-81,48;CL:0000766,2.06e-73,72;CL:0002194,1.99e-67,59;CL:0000576,1.99e-67,59;CL:0000040,1.99e-67,59;CL:0000559,1.99e-67,59;CL:0002009,5.59e-65,61;CL:0000839,1.70e-59,66;CL:0000557,1.70e-58,67;CL:0000763,1.14e-48,108;CL:0000049,1.14e-48,108;CL:0000738,2.18e-43,136;CL:0002087,1.57e-39,115;CL:0000037,3.95e-35,168;CL:0002032,3.23e-33,161;CL:0000837,3.23e-33,161;CL:0002031,3.67e-33,120;CL:0000988,7.54e-33,177;CL:0002393,1.13e-25,9;CL:0002397,1.13e-25,9;CL:0000775,2.46e-13,3;CL:0000094,9.30e-13,8;CL:0000875,3.37e-12,3;CL:0002396,3.37e-12,3;CL:0000134,1.70e-11,354;CL:0002320,4.42e-11,361;CL:0000219,1.26e-09,386;CL:0000081,3.59e-09,11;CL:0000771,5.01e-09,2;CL:0000048,7.52e-08,427;CL:0000723,1.32e-07,433;CL:0000034,2.72e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.65e-58;42!CL:0000049;6.40e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.15e-59!102;UBERON:0003061!4.15e-59!102;UBERON:0002193!2.26e-55!112;UBERON:0002371!1.30e-42!80;UBERON:0001474!1.95e-38!86;UBERON:0002405!3.66e-33!115;UBERON:0004765!3.38e-30!101;UBERON:0001434!3.38e-30!101;UBERON:0003081!1.15e-19!216;UBERON:0000178!2.72e-15!15;UBERON:0000179!2.72e-15!15;UBERON:0000463!2.72e-15!15;UBERON:0007023!3.03e-14!115;UBERON:0002204!4.71e-12!167;UBERON:0002384!5.69e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.79e-30;15!UBERON:0000179;7.79e-30;15!UBERON:0000463;7.79e-30;15!UBERON:0002390;5.12e-12;32!UBERON:0002193;8.41e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,6.05e-71,98;UBERON:0003061,6.05e-71,98;UBERON:0002193,1.61e-63,108;UBERON:0002371,1.15e-50,76;UBERON:0001474,2.17e-46,82;UBERON:0004765,1.45e-41,90;UBERON:0002405,5.72e-40,93;UBERON:0001434,1.30e-36,100;UBERON:0000178,9.00e-30,15;UBERON:0000179,9.00e-30,15;UBERON:0000463,9.00e-30,15;UBERON:0003081,2.96e-29,203;UBERON:0002204,1.14e-18,167;UBERON:0000926,2.71e-15,315;UBERON:0004120,2.71e-15,315;UBERON:0006603,2.71e-15,315;UBERON:0002384,1.62e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.410502947249729,0.944529375764151,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,1.10799081706375,0.802177789880567,1.30206522429511,0.895661896959697,0.32389366601898,0.515151135268373,2.61716829803216,1.13362783106643,1.94067248950253,0.697287110717054,0.411167888021826,1.85823822537062,0.575384784644301,1.7931249457037,2.12834006899727,5.17118521104928,3.87290810150296,0,1.69418105588344,0.818718450173537,0.449446968890169,1.83650335422542,1.60464513538047,0,3.29851300186716,3.39088217956774,2.98357325372886,1.7412554317715,0,1.86846674698672,4.01997864410789,3.12889751052121,1.73751075764093,1.81619850790011,1.47311054395026,0.632924774881769,5.70389273042243,7.22854619881148,9.22498040236854,18.1972382457322,14.5671586056261,18.3227168834671,2.85012743741249,5.56966696157452,3.65328307529268,0,0,0,0.853460445133014,0.400395987036012,0.574752439954483,1.98313461835459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50575119077773,0,0,0.947109008176067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.97364218096405,0.870648686496336,0.797747763113191,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,1.63802985597466,0.743155811443641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,35.9523371494648,35.899375104483,50.5586926391963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,2.15714200818617,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,14.2085330585007,14.5281069357051,9.1143549947866,10.7204298956005,13.5749550118444,14.2664128462398,15.6609116799053,7.9312517629427,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.47003968731907,0,0,0,0,0.425846237690326,1.71752672377882,0.921722292925374,1.3420566473545,0.500547425135725,0.976940477010201,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0.63186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.747511887973863,0.157204305099666,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0.132864840313363,0.490696182767533,0,0,0,0,0.853533837553127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.939839179798536,0.515663103788617,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0.829169439458779,0.103432995861895,0,0,0.0645889098360061,0.372448285775147,0,0.12729431655633,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0,0.320568492303233 | |||
|short_description=p3@MNDA | |||
}} |
Revision as of 21:36, 10 January 2014
Short description: | p3@MNDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MNDA_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 13bp_to_NM_002432, uc001fsz.1_5end |
EntrezGene: | MNDA |
HGNC: | 7183 |
UniProt: | P41218Q5VUU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.05e-71 | 98 |
blood island | 6.05e-71 | 98 |
hemolymphoid system | 1.61e-63 | 108 |
bone marrow | 1.15e-50 | 76 |
bone element | 2.17e-46 | 82 |
skeletal element | 1.45e-41 | 90 |
immune system | 5.72e-40 | 93 |
skeletal system | 1.30e-36 | 100 |
blood | 9.00e-30 | 15 |
haemolymphatic fluid | 9.00e-30 | 15 |
organism substance | 9.00e-30 | 15 |
lateral plate mesoderm | 2.96e-29 | 203 |
musculoskeletal system | 1.14e-18 | 167 |
mesoderm | 2.71e-15 | 315 |
mesoderm-derived structure | 2.71e-15 | 315 |
presumptive mesoderm | 2.71e-15 | 315 |
connective tissue | 1.62e-10 | 371 |