FFCP PHASE1:Hg19::chr11:10396176..10396208,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:10396176..10396208,+ | |||
|id=chr11:10396176..10396208,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.95e-31!180;CL:0000680!3.05e-24!57;CL:0000056!3.05e-24!57;CL:0000355!3.05e-24!57;CL:0000187!2.17e-21!54;CL:0000057!2.56e-21!75;CL:0000048!3.97e-20!430;CL:0000192!7.78e-20!42;CL:0000514!7.78e-20!42;CL:0000723!2.41e-19!436;CL:0000359!1.01e-18!32;CL:0000183!1.43e-18!59;CL:0000034!2.46e-18!444;CL:0000393!4.56e-18!60;CL:0000211!4.56e-18!60;CL:0002620!3.62e-16!23;CL:0002334!2.25e-15!12;CL:0000222!3.12e-12!119;CL:0000136!1.06e-10!15;CL:0002371!1.25e-10!591;CL:0000144!1.60e-10!625;CL:0002539!3.37e-10!10;CL:0002595!5.54e-08!5;CL:0000548!1.72e-07!679;CL:0000004!1.72e-07!679;CL:0000255!1.72e-07!679;CL:0000012!2.75e-07!682;CL:0002320!8.08e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.65e-21;12!CL:0000359;7.36e-16;32!CL:0002595;1.43e-14;5!CL:0000192;3.83e-10;43!CL:0000136;1.92e-09;13!CL:0002579;3.65e-09;3!CL:0002582;7.30e-09;3!CL:0002539;2.05e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,3.05e-21,12;CL:0000359,7.38e-17,32;CL:0002595,1.25e-14,5;CL:0000136,4.84e-13,15;CL:0000057,1.22e-11,76;CL:0000192,1.43e-11,43;CL:0000514,1.43e-11,43;CL:0000680,1.93e-11,58;CL:0000056,1.93e-11,58;CL:0000355,1.93e-11,58;CL:0000048,8.81e-11,427;CL:0000723,1.96e-10,433;CL:0000034,5.51e-10,441;CL:0000187,1.73e-09,55;CL:0002579,3.94e-09,3;CL:0002582,1.72e-08,3;CL:0000393,3.51e-08,61;CL:0000211,3.51e-08,61;CL:0002539,1.80e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.83e-10;43!CL:0000355;8.81e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!2.69e-10!14;DOID:17!5.76e-07!5;DOID:450!5.76e-07!5;DOID:66!5.76e-07!5;DOID:423!5.76e-07!5;DOID:0080000!5.76e-07!5;DOID:11722!5.76e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.92e-09;14!DOID:0060084;2.96e-09;3!DOID:127;2.96e-09;3!DOID:17;1.41e-08;5!DOID:450;1.41e-08;5!DOID:66;1.41e-08;5!DOID:423;1.41e-08;5!DOID:0080000;1.41e-08;5!DOID:11722;1.41e-08;5!DOID:0060072;5.00e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.83e-09,14;DOID:0060084,3.94e-09,3;DOID:127,3.94e-09,3;DOID:17,1.13e-08,5;DOID:450,1.13e-08,5;DOID:66,1.13e-08,5;DOID:423,1.13e-08,5;DOID:0080000,1.13e-08,5;DOID:11722,1.13e-08,5;DOID:0060072,6.18e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0004290!2.22e-23!70;UBERON:0001134!8.63e-22!61;UBERON:0002036!8.63e-22!61;UBERON:0003082!8.63e-22!61;UBERON:0001637!4.48e-21!42;UBERON:0003509!4.48e-21!42;UBERON:0004572!4.48e-21!42;UBERON:0002385!1.09e-20!63;UBERON:0001015!1.09e-20!63;UBERON:0000383!1.09e-20!63;UBERON:0000914!1.32e-20!83;UBERON:0002329!1.32e-20!83;UBERON:0003077!1.32e-20!83;UBERON:0003059!1.32e-20!83;UBERON:0007282!1.32e-20!83;UBERON:0009618!1.32e-20!83;UBERON:0007285!1.32e-20!83;UBERON:0004573!3.36e-20!33;UBERON:0004571!3.36e-20!33;UBERON:0000486!3.49e-20!82;UBERON:0001981!6.64e-13!60;UBERON:0007500!6.64e-13!60;UBERON:0004537!6.64e-13!60;UBERON:0006965!6.64e-13!60;UBERON:0002199!7.09e-13!45;UBERON:0002416!7.09e-13!45;UBERON:0004872!3.81e-11!84;UBERON:0000947!4.09e-11!21;UBERON:0010191!4.09e-11!21;UBERON:0002097!3.09e-10!40;UBERON:0004237!3.37e-10!10;UBERON:0004695!3.37e-10!10;UBERON:0002111!3.37e-10!10;UBERON:0004178!3.37e-10!10;UBERON:0001135!4.51e-10!15;UBERON:0000055!5.21e-10!69;UBERON:0005256!4.71e-09!143;UBERON:0002049!2.47e-08!79;UBERON:0007798!2.47e-08!79;UBERON:0003834!5.54e-08!5;UBERON:0001533!5.54e-08!5;UBERON:0002384!3.42e-07!375;UBERON:0002100!3.89e-07!216;UBERON:0003102!5.99e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0003834;1.43e-14;5!UBERON:0001533;1.43e-14;5!UBERON:0004573;3.86e-14;33!UBERON:0004571;3.86e-14;33!UBERON:0003513;2.72e-10;7!UBERON:0002118;3.30e-10;5!UBERON:0001637;2.84e-09;42!UBERON:0003509;2.84e-09;42!UBERON:0004572;2.84e-09;42!UBERON:0003688;1.31e-07;6!UBERON:0002358;1.31e-07;6!UBERON:0003684;1.31e-07;6!UBERON:0001178;1.31e-07;6!UBERON:0004457;1.97e-07;9!UBERON:0000042;1.97e-07;9!UBERON:0004237;2.05e-07;10!UBERON:0004695;2.05e-07;10!UBERON:0002111;2.05e-07;10!UBERON:0004178;2.05e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.17e-16,33;UBERON:0004571,2.17e-16,33;UBERON:0003834,1.25e-14,5;UBERON:0001533,1.25e-14,5;UBERON:0001637,7.14e-14,42;UBERON:0003509,7.14e-14,42;UBERON:0004572,7.14e-14,42;UBERON:0002329,8.18e-11,71;UBERON:0003059,8.18e-11,71;UBERON:0007282,8.18e-11,71;UBERON:0004290,8.18e-11,71;UBERON:0009618,8.18e-11,71;UBERON:0003077,1.36e-10,72;UBERON:0007285,1.36e-10,72;UBERON:0001134,2.06e-10,62;UBERON:0002036,2.06e-10,62;UBERON:0003082,2.06e-10,62;UBERON:0007524,2.21e-10,73;UBERON:0003513,2.48e-10,7;UBERON:0002118,2.90e-10,5;UBERON:0002385,5.99e-10,64;UBERON:0001015,5.99e-10,64;UBERON:0000383,5.99e-10,64;UBERON:0000486,1.33e-09,83;UBERON:0007503,2.11e-09,78;UBERON:0007500,9.95e-09,59;UBERON:0001981,9.95e-09,59;UBERON:0004537,9.95e-09,59;UBERON:0006965,9.95e-09,59;UBERON:0002199,3.24e-08,46;UBERON:0002416,3.24e-08,46;UBERON:0003688,9.80e-08,6;UBERON:0002358,9.80e-08,6;UBERON:0003684,9.80e-08,6;UBERON:0001178,9.80e-08,6;UBERON:0004237,1.80e-07,10;UBERON:0004695,1.80e-07,10;UBERON:0002111,1.80e-07,10;UBERON:0004178,1.80e-07,10;UBERON:0000055,4.43e-07,68;UBERON:0005406,8.07e-07,2 | |||
|phase1_expression=1.2717486548939,0.428201047781966,1.9733616573436,0,0.446961094427288,1.74467704820074,0,2.52687949370732,0.261185628199839,0,0,0,0,0,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.633152558322899,15.8891016975863,0.860509862246441,0.709336764396714,0,0,0,0,0,0,0,0.576175924479999,0,1.24864030732128,0.570471821544449,0.149448680551801,0.117434498643765,0,0,0.816616685019573,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0,0,1.4351170855109,1.49490172172997,1.05965950579781,1.80054657650641,0.618315175430633,1.8034837803194,0.37223371266318,3.03797398034279,0.389748020644795,0.757301322732344,0.460249493211497,0.161646056818812,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,3.01439377059586,0.871533458600294,0.799783929456456,0,0,0,0.239624855491583,0,1.42636905040718,1.59259437334337,0.821905290201534,1.79060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,1.96271887676878,0.315404830067869,1.28855556491985,0,0,0,0,0.184369168541703,0.434418072340414,0,0,0,0,0,0,0,0,3.72161711728165,0.767309866440312,0.841980283299221,3.58789617915963,2.55853624533352,1.12597744800525,4.45254199334973,1.23367755042124,1.59805552781814,3.12083192852475,1.03850885836724,1.04589340613963,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0.082509499920588,0,0,3.21367859688319,0.096670718292122,0,0,0.275673144969061,0.214840489736547,0.145016693914229,0.340906509664404,0.0890320356467374,0,0,0,0,6.97268323945929,11.6480568327337,6.2733354314454,0.308033580176089,1.59691809095107,5.21959795245044,1.11194531462352,1.00187420719394,0,0,0,0,0,10.8189104294818,0,0.179872457583315,0.274537029736055,0.117812402345686,2.83055474202642,0,0.842516912477962,0,1.46228093778771,2.11300293513511,0.136499911407986,0,2.26016233240486,4.96228809191512,4.64407282668854,2.63070531152258,0.578775534266688,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.354761064070598,0.422215270595328,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,1.48323486804084,0,0.398495976502139,0,0,0.102268682502155,0,3.11039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,1.5950057986596,1.09917112082235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14882720709979,0,0,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08599920350743,2.5926644736038,4.57222304153173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,2.506898940227,3.06345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.947015026375446,2.0125432140206,0,0.457680136793847,0.756154618816195,0.621748802331122,0.887130899937803,1.75226443880073,0.899606224327209,0.465788870628778,0.829412415681711,0.265841714557995,1.04349012362347,0,6.47368860686952,4.88244879845594,2.90957854724095,0,7.88857391793439,14.3314519931502,0.400027764663154,1.03018711554838,1.34699795506368,0,0,0,0,0,0,0,0,0,0,1.06013487567529,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.0255760305528,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52934403219035,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0,3.8936390591141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:10396176..10396208,+ | |||
}} |
Revision as of 06:33, 11 January 2014
Short description: | p@chr11:10396176..10396208, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:10396176..10396208, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 3.05e-21 | 12 |
vascular associated smooth muscle cell | 7.38e-17 | 32 |
smooth muscle cell of the subclavian artery | 1.25e-14 | 5 |
fat cell | 4.84e-13 | 15 |
fibroblast | 1.22e-11 | 76 |
smooth muscle cell | 1.43e-11 | 43 |
smooth muscle myoblast | 1.43e-11 | 43 |
muscle precursor cell | 1.93e-11 | 58 |
myoblast | 1.93e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.93e-11 | 58 |
multi fate stem cell | 8.81e-11 | 427 |
somatic stem cell | 1.96e-10 | 433 |
stem cell | 5.51e-10 | 441 |
muscle cell | 1.73e-09 | 55 |
omentum preadipocyte | 3.94e-09 | 3 |
visceral preadipocyte | 1.72e-08 | 3 |
electrically responsive cell | 3.51e-08 | 61 |
electrically active cell | 3.51e-08 | 61 |
aortic smooth muscle cell | 1.80e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.83e-09 | 14 |
cell type benign neoplasm | 3.94e-09 | 3 |
leiomyoma | 3.94e-09 | 3 |
musculoskeletal system disease | 1.13e-08 | 5 |
myotonic disease | 1.13e-08 | 5 |
muscle tissue disease | 1.13e-08 | 5 |
myopathy | 1.13e-08 | 5 |
muscular disease | 1.13e-08 | 5 |
myotonic dystrophy | 1.13e-08 | 5 |
benign neoplasm | 6.18e-07 | 4 |