FFCP PHASE1:Hg19::chr13:52980295..52980320,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55901 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17754 | |||
|TSSclassifier=strong | |||
|UniProt=F5H419 | |||
|association_with_transcript=-17bp_to_ENST00000544466_5end | |||
|description=CAGE_peak_2_at_THSD1_5end | |||
|id=chr13:52980295..52980320,- | |||
|ontology_enrichment_celltype=CL:0000220!1.36e-21!246;CL:0002321!8.21e-21!248;CL:0000222!4.57e-20!119;CL:0002139!1.95e-16!24;CL:0000213!8.96e-14!57;CL:0000215!8.96e-14!57;CL:0000076!1.35e-13!62;CL:0002078!2.40e-13!44;CL:0000071!5.95e-13!18;CL:0002546!5.95e-13!18;CL:0000115!5.97e-13!35;CL:0000066!4.92e-08!254;CL:0000680!1.81e-07!57;CL:0000056!1.81e-07!57;CL:0000355!1.81e-07!57;CL:0000183!2.18e-07!59;CL:1000497!3.66e-07!18;CL:0002518!3.66e-07!18;CL:1000413!5.74e-07!9;CL:0000187!7.21e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.96e-19;24!CL:0000071;3.08e-15;18!CL:0000115;3.80e-14;36!CL:0002078;2.70e-11;45!CL:0000213;1.57e-09;58!CL:0000215;1.57e-09;58!CL:1000497;1.17e-08;17!CL:0002518;1.17e-08;17!CL:1000413;4.49e-08;9!CL:1000449;1.12e-07;15!CL:0000076;4.83e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.68e-20,250;CL:0002139,2.20e-19,24;CL:0000222,1.51e-18,121;CL:0002078,1.51e-17,45;CL:0000115,1.13e-16,36;CL:0000213,4.03e-16,58;CL:0000215,4.03e-16,58;CL:0000071,3.31e-15,18;CL:0002546,3.31e-15,18;CL:0000076,1.74e-13,63;CL:0000066,1.94e-09,253;CL:1000497,9.13e-09,17;CL:0002518,9.13e-09,17;CL:1000413,4.82e-08,9;CL:1000449,8.44e-08,15 | |||
|ontology_enrichment_development_v019=CL:0002546;3.08e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!3.05e-22!309;UBERON:0000119!4.75e-22!312;UBERON:0000055!9.87e-21!69;UBERON:0004111!4.43e-20!241;UBERON:0001981!8.40e-19!60;UBERON:0007500!8.40e-19!60;UBERON:0004537!8.40e-19!60;UBERON:0006965!8.40e-19!60;UBERON:0002049!5.63e-18!79;UBERON:0007798!5.63e-18!79;UBERON:0004872!4.73e-17!84;UBERON:0000475!1.48e-16!365;UBERON:0000477!4.69e-16!286;UBERON:0003914!1.58e-15!118;UBERON:0000025!1.42e-14!194;UBERON:0000481!1.29e-13!347;UBERON:0001986!5.95e-13!18;UBERON:0004638!5.95e-13!18;UBERON:0004852!5.95e-13!18;UBERON:0000467!8.17e-13!625;UBERON:0000468!1.11e-12!659;UBERON:0000480!1.39e-12!626;UBERON:0001009!1.80e-12!113;UBERON:0004535!5.24e-12!110;UBERON:0002100!1.60e-11!216;UBERON:0003103!2.09e-11!69;UBERON:0001637!2.35e-11!42;UBERON:0003509!2.35e-11!42;UBERON:0004572!2.35e-11!42;UBERON:0000486!3.99e-11!82;UBERON:0000490!5.98e-10!138;UBERON:0003104!7.29e-10!238;UBERON:0009142!7.29e-10!238;UBERON:0000487!1.08e-09!22;UBERON:0005256!1.47e-09!143;UBERON:0006914!1.70e-09!25;UBERON:0002385!4.81e-09!63;UBERON:0001015!4.81e-09!63;UBERON:0000383!4.81e-09!63;UBERON:0001134!6.04e-09!61;UBERON:0002036!6.04e-09!61;UBERON:0003082!6.04e-09!61;UBERON:0000914!6.29e-09!83;UBERON:0002329!6.29e-09!83;UBERON:0003077!6.29e-09!83;UBERON:0003059!6.29e-09!83;UBERON:0007282!6.29e-09!83;UBERON:0009618!6.29e-09!83;UBERON:0007285!6.29e-09!83;UBERON:0002050!1.63e-08!605;UBERON:0005423!1.63e-08!605;UBERON:0000922!2.26e-08!612;UBERON:0004573!2.78e-08!33;UBERON:0004571!2.78e-08!33;UBERON:0004290!3.05e-08!70;UBERON:0000923!3.18e-08!604;UBERON:0005291!3.18e-08!604;UBERON:0006598!3.18e-08!604;UBERON:0002532!3.18e-08!604;UBERON:0003915!5.74e-07!9;UBERON:0004700!5.74e-07!9;UBERON:0001917!5.74e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.08e-15;18!UBERON:0001986;3.08e-15;18!UBERON:0004852;3.08e-15;18!UBERON:0000487;4.55e-12;22!UBERON:0006914;5.70e-12;25!UBERON:0000055;4.49e-11;65!UBERON:0003914;9.46e-11;74!UBERON:0000490;3.58e-10;33!UBERON:0001637;8.81e-10;42!UBERON:0003509;8.81e-10;42!UBERON:0004572;8.81e-10;42!UBERON:0007500;2.57e-09;56!UBERON:0001981;2.57e-09;56!UBERON:0004537;2.57e-09;56!UBERON:0000025;2.29e-08;93!UBERON:0003915;4.49e-08;9!UBERON:0004700;4.49e-08;9!UBERON:0001917;4.49e-08;9!UBERON:0004573;9.39e-08;33!UBERON:0004571;9.39e-08;33!UBERON:0006555;1.12e-07;15!UBERON:0004819;1.12e-07;15!UBERON:0001285;1.12e-07;15!UBERON:0007684;1.12e-07;15!UBERON:0002049;2.01e-07;75!UBERON:0007798;2.01e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,3.41e-22,68;UBERON:0007500,2.11e-19,59;UBERON:0001981,2.11e-19,59;UBERON:0004537,2.11e-19,59;UBERON:0006965,2.11e-19,59;UBERON:0004872,7.12e-18,83;UBERON:0002049,1.76e-17,78;UBERON:0007798,1.76e-17,78;UBERON:0000483,2.43e-16,306;UBERON:0003914,3.17e-16,117;UBERON:0000119,1.09e-15,309;UBERON:0004638,3.31e-15,18;UBERON:0001986,3.31e-15,18;UBERON:0004852,3.31e-15,18;UBERON:0004111,6.98e-15,240;UBERON:0001009,1.74e-12,112;UBERON:0004535,2.58e-12,109;UBERON:0000487,3.81e-12,22;UBERON:0006914,4.11e-12,25;UBERON:0000025,1.48e-11,192;UBERON:0001637,3.55e-11,42;UBERON:0003509,3.55e-11,42;UBERON:0004572,3.55e-11,42;UBERON:0003103,6.97e-10,68;UBERON:0000486,2.98e-08,83;UBERON:0004573,4.33e-08,33;UBERON:0004571,4.33e-08,33;UBERON:0003915,4.82e-08,9;UBERON:0004700,4.82e-08,9;UBERON:0001917,4.82e-08,9;UBERON:0004211,8.44e-08,15;UBERON:0009773,8.44e-08,15;UBERON:0001231,8.44e-08,15;UBERON:0001285,8.44e-08,15;UBERON:0007684,8.44e-08,15;UBERON:0004208,8.44e-08,15;UBERON:0000490,9.76e-08,148;UBERON:0006555,1.18e-07,16;UBERON:0004819,1.18e-07,16;UBERON:0007503,2.52e-07,78;UBERON:0002100,2.89e-07,199;UBERON:0000922,4.41e-07,592;UBERON:0005423,6.79e-07,581 | |||
|phase1_expression=0.54503513781167,0.428201047781966,0.281908808191942,0,0,0.872338524100369,0,1.26343974685366,0,0,0,0,0,0.618831764800233,0.331397375727916,1.34465029290355,1.20538905604795,1.46062018077475,0.487932798790507,0.61560529038394,1.42800483870977,0,1.14494394852423,1.36874425072884,1.12988375635323,0,0,0,0,0,0,7.35536979583142,6.92773613189975,6.28581817283539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.790152254325231,0,0,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.767175371061182,5.78302643815306,1.00267582127178,1.59331170856906,0,0.973269740605272,0.0945348171640679,0.221729397462564,0.175669571386252,1.30979075497713,3.27865759463288,5.93255108455087,0,0,0.132957960518865,0,0,0,8.34802110940161,6.881876760849,9.02565304179745,6.21838736116411,5.03399323451887,4.95212475492121,6.26984899610432,4.90991842421725,4.62496141492723,5.02080919147005,8.45941565929209,7.60272105718513,11.470916704764,4.41195696415042,6.48113558305408,6.78677934959006,9.87929239555147,7.65758067286591,7.66583187329416,5.69559395740877,7.32806975721629,0,0,6.10531672999548,1.49091585508596,2.5326102332916,2.38336525463794,6.02356903572509,1.77334191099179,1.12135520028461,0,0.74000264525148,1.55605517699883,2.2900814251847,1.30769522490767,0.302714855289863,0,0,2.18512053781224,1.1409436430889,2.83952493048422,0.352303495931295,0.161872944368132,0,0.61246251376468,0.491337269247072,0.516628905878827,1.18800285728205,0.247266929278557,0,2.15585442544872,1.17835279767846,0.375355559615893,1.10825646193673,1.75591048352335,0.30648779579902,0.300476117813194,0.794025282120147,2.51145489964407,0.427114777637135,0.847727604638247,5.40163972951924,1.64884046781502,3.34932702059318,2.79175284497385,2.19409231913646,1.55899208257918,0.504867548488229,0.460249493211497,0.646584227275248,1.06502877754984,2.31729825923573,0.847802961552438,4.44499962275583,8.45512973831587,4.30206893083506,0,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,1.38134921352481,0.928735856063958,1.44375896333917,0,0,0,0,0.217879444092406,0,0,0,0,5.90524363699719,2.80483547606892,0.4115740113314,0,1.26755034821831,1.96565443335525,0.590789906681404,0,0,0.514703430895577,2.19500570817251,5.62008766288098,2.31216636546751,4.0738915869753,0.325808305310325,0,1.44331342025273,0,1.17408694235822,7.36268883581476,7.87075371380238,6.08813287150714,0,0,0,0,0,5.62403003920662,3.02367830757947,3.96970272278682,4.11969204433102,4.94077695473735,8.43441894163465,0,0.088048434013226,0.829312462163088,0.576479813667846,0.12624243342638,0.317489471460845,0,0,1.71072446022705,0.514137463516618,1.20137223137567,0,0.560655421726804,0.43596006883328,0.36669142910475,1.42198887333556,0,1.690605505112,0,0,0.257207374262142,1.41849132023278,1.0656887160644,0.142977993658148,0.542621605391443,1.64648067356154,1.95441710576241,0,0.791951872933429,2.71295439353627,0.871533458600294,3.29910870900788,0,0,0,0,0,4.27910715122155,1.73737568001095,1.64381058040307,3.22309733831812,0,0,0.215627574859517,0,0.76228387266739,2.60279707715243,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0.500170521059677,0.271265023699736,0.415941723061614,1.24900292158013,0.473107245101804,2.6942525448324,1.80567659836631,2.27407504055985,0,1.99267679560631,1.65932251687533,1.12948698808508,0,0.343143423810856,0,0,0,0,0,0,1.48864684691266,0.767309866440312,1.68396056659844,1.15325234330131,0.511707249066704,0.482561763430822,0,0.925258162815933,2.30830242907065,2.13530605635904,4.15403543346897,2.32420756919918,0,3.80962293576241,1.74953878978203,1.37777337797528,1.82091168006717,2.49136388422906,4.06079651616671,2.00239876471478,7.0591479225917,5.84556898613043,1.68882606228601,3.4120015221269,6.63365450578411,4.75015015424707,7.71136263451447,3.52230368807009,5.01689773854853,2.80363900349542,1.66215201785745,6.94011739638753,0,0,2.82095137628028,0.656029291399411,0,1.13345112812495,0.0915694648183434,0.165018999841176,2.29706215198469,1.95018073810956,0,2.51343867559517,1.54048617114644,2.45605879561807,1.92971201478343,0.537101224341368,1.0151168573996,1.96021243057032,2.31483292681517,1.81813406897076,6.1500821556834,7.40153732468588,3.13589120652205,0.929691098594572,2.20368642781448,2.0911118104818,1.23213432070436,2.12922412126809,0.869932992075073,1.8532421910392,1.14499909393593,1.116475108079,0.632758849437452,1.5250415513906,2.55897791311334,0.855877976067841,1.90921948755562,0.78494864019923,0.539617372749944,0.823611089208164,1.64937363283961,1.2130948894399,4.75530963519025,5.05510147486777,0.48763373908959,4.87426979262569,0,0.682499557039929,0.707027159768564,5.65040583101214,2.75682671773062,2.65375590096488,2.19225442626881,2.31510213706675,0.655894752046633,1.82619339266434,3.717881977197,8.45086807596724,1.14729081763241,0.982490410131212,1.426684205925,2.12856638442359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| |||
|short_description=p2@THSD1 | |||
}} |
Revision as of 17:53, 11 January 2014
Short description: | p2@THSD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_THSD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000544466_5end |
EntrezGene: | THSD1 |
HGNC: | 17754 |
UniProt: | F5H419 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.68e-20 | 250 |
endothelial cell of vascular tree | 2.20e-19 | 24 |
mesodermal cell | 1.51e-18 | 121 |
meso-epithelial cell | 1.51e-17 | 45 |
endothelial cell | 1.13e-16 | 36 |
lining cell | 4.03e-16 | 58 |
barrier cell | 4.03e-16 | 58 |
blood vessel endothelial cell | 3.31e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.31e-15 | 18 |
squamous epithelial cell | 1.74e-13 | 63 |
epithelial cell | 1.94e-09 | 253 |
kidney cell | 9.13e-09 | 17 |
kidney epithelial cell | 9.13e-09 | 17 |
endothelial cell of artery | 4.82e-08 | 9 |
epithelial cell of nephron | 8.44e-08 | 15 |