FFCP PHASE1:Hg19::chr14:38678617..38678678,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6751 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11330 | |||
|TSSclassifier=weak | |||
|UniProt= | |||
|association_with_transcript=336bp_to_uc010amu.1_5end | |||
|description=CAGE_peak_2_at_SSTR1_5end | |||
|id=chr14:38678617..38678678,+ | |||
|ontology_enrichment_celltype=CL:0000057!6.07e-15!75;CL:0002620!4.30e-13!23;CL:0000055!1.07e-12!180;CL:0000192!1.43e-08!42;CL:0000514!1.43e-08!42;CL:0000680!2.49e-08!57;CL:0000056!2.49e-08!57;CL:0000355!2.49e-08!57;CL:0000183!3.80e-07!59;CL:0000187!4.49e-07!54;CL:0002334!7.44e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;9.24e-17;23!CL:0000359;1.67e-07;32!CL:0000192;4.08e-07;43!CL:0002594;5.31e-07;4!CL:0002334;9.96e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,7.90e-17,23;CL:0000057,1.29e-13,76;CL:0000192,2.18e-09,43;CL:0000514,2.18e-09,43;CL:0000680,1.36e-08,58;CL:0000056,1.36e-08,58;CL:0000355,1.36e-08,58;CL:0000359,2.48e-08,32;CL:0002594,5.82e-07,4;CL:0000187,7.64e-07,55;CL:0002334,9.97e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;4.08e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.44e-09;5!DOID:450;8.44e-09;5!DOID:66;8.44e-09;5!DOID:423;8.44e-09;5!DOID:0080000;8.44e-09;5!DOID:11722;8.44e-09;5!DOID:2394;7.36e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.89e-09,5;DOID:450,8.89e-09,5;DOID:66,8.89e-09,5;DOID:423,8.89e-09,5;DOID:0080000,8.89e-09,5;DOID:11722,8.89e-09,5;DOID:2394,6.80e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000475!2.50e-15!365;UBERON:0007023!1.31e-12!115;UBERON:0001049!6.73e-12!57;UBERON:0005068!6.73e-12!57;UBERON:0006241!6.73e-12!57;UBERON:0007135!6.73e-12!57;UBERON:0000025!8.17e-11!194;UBERON:0000483!8.93e-11!309;UBERON:0004290!1.53e-10!70;UBERON:0000119!2.67e-10!312;UBERON:0002780!7.14e-10!41;UBERON:0001890!7.14e-10!41;UBERON:0006240!7.14e-10!41;UBERON:0005743!8.29e-10!86;UBERON:0002346!1.08e-09!90;UBERON:0004111!1.20e-09!241;UBERON:0001017!1.27e-09!82;UBERON:0001893!1.49e-09!34;UBERON:0003080!2.19e-09!42;UBERON:0002199!2.48e-09!45;UBERON:0002416!2.48e-09!45;UBERON:0002616!2.50e-09!59;UBERON:0002020!2.77e-09!34;UBERON:0003528!2.77e-09!34;UBERON:0003075!2.94e-09!86;UBERON:0007284!2.94e-09!86;UBERON:0000914!3.44e-09!83;UBERON:0002329!3.44e-09!83;UBERON:0003077!3.44e-09!83;UBERON:0003059!3.44e-09!83;UBERON:0007282!3.44e-09!83;UBERON:0009618!3.44e-09!83;UBERON:0007285!3.44e-09!83;UBERON:0000468!4.60e-09!659;UBERON:0002791!4.99e-09!33;UBERON:0001869!7.50e-09!32;UBERON:0002097!8.54e-09!40;UBERON:0002385!8.96e-09!63;UBERON:0001015!8.96e-09!63;UBERON:0000383!8.96e-09!63;UBERON:0000477!2.57e-08!286;UBERON:0001134!3.31e-08!61;UBERON:0002036!3.31e-08!61;UBERON:0003082!3.31e-08!61;UBERON:0000073!6.34e-08!94;UBERON:0001016!6.34e-08!94;UBERON:0002619!7.92e-08!22;UBERON:0000955!8.04e-08!69;UBERON:0006238!8.04e-08!69;UBERON:0000486!9.37e-08!82;UBERON:0000481!1.44e-07!347;UBERON:0005256!6.15e-07!143;UBERON:0001950!7.55e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.71e-10;22!UBERON:0001869;3.47e-09;32!UBERON:0002097;5.36e-09;41!UBERON:0001950;5.57e-09;20!UBERON:0000956;8.16e-09;25!UBERON:0000203;8.16e-09;25!UBERON:0001893;1.29e-08;34!UBERON:0002791;5.96e-08;32!UBERON:0002199;1.39e-07;46!UBERON:0002416;1.39e-07;46!UBERON:0003528;3.95e-07;34!UBERON:0002020;3.95e-07;34!UBERON:0001310;5.31e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,9.86e-12,41;UBERON:0002199,7.04e-11,46;UBERON:0002416,7.04e-11,46;UBERON:0002619,1.13e-10,22;UBERON:0001869,2.08e-10,32;UBERON:0003077,3.64e-10,72;UBERON:0007285,3.64e-10,72;UBERON:0007524,6.54e-10,73;UBERON:0002329,1.22e-09,71;UBERON:0003059,1.22e-09,71;UBERON:0007282,1.22e-09,71;UBERON:0004290,1.22e-09,71;UBERON:0009618,1.22e-09,71;UBERON:0001893,1.62e-09,34;UBERON:0002791,3.60e-09,32;UBERON:0001950,4.65e-09,20;UBERON:0000956,5.73e-09,25;UBERON:0000203,5.73e-09,25;UBERON:0007503,7.45e-09,78;UBERON:0002385,9.19e-09,64;UBERON:0001015,9.19e-09,64;UBERON:0000383,9.19e-09,64;UBERON:0003528,2.25e-08,34;UBERON:0002020,2.25e-08,34;UBERON:0001134,2.36e-08,62;UBERON:0002036,2.36e-08,62;UBERON:0003082,2.36e-08,62;UBERON:0001049,2.26e-07,56;UBERON:0005068,2.26e-07,56;UBERON:0006241,2.26e-07,56;UBERON:0007135,2.26e-07,56;UBERON:0000486,3.97e-07,83;UBERON:0002780,4.15e-07,41;UBERON:0001890,4.15e-07,41;UBERON:0003080,4.15e-07,41;UBERON:0006240,4.15e-07,41;UBERON:0001310,5.82e-07,4 | |||
|phase1_expression=1.45342703416445,0.428201047781966,0.563817616383885,2.00146596706261,0,1.74467704820074,2.53299878168311,0,0.261185628199839,0.245733936501509,0,0,0,0,0.331397375727916,1.34465029290355,1.20538905604795,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0.208994966536811,0,1.06729878806013,0,0,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0.379891534993739,6.22323149822128,1.72101972449288,0.354668382198357,0,0,0,1.24484414159907,1.21239604862719,0.653847612453835,0,0,0.70296429550139,0,0.570471821544449,0.298897361103602,1.29177948508141,0.323745888736263,0.561803226808994,0,0,0,0,0.247266929278557,5.46096817162816,11.4978902690598,0,0,0.831192346452549,0.877955241761676,0,0.300476117813194,0.907457465280168,4.48474089222155,5.12537733164562,9.74886745333984,23.107014398499,7.62588716364448,6.95629458123199,9.49195967291108,14.5147645727489,5.74878330451072,4.79624171063818,8.00834118188004,1.77810662500693,14.2003837006646,9.16844093871526,11.1909990924922,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,3.12899064659632,5.78916844373597,4.14404764057442,0,0,0.473227200159376,0.337169380156203,0,0.220587945464788,0.653638332277218,0.237270619111097,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,0,0,0.982827216677626,0.590789906681404,0,0.491953754172454,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0,1.16344544182,0,0,11.7012771297343,21.8415617513869,0,0,0,0.57191197463259,0,2.46972101034231,0,0,0,0.904318131178758,3.48613383440118,0.799783929456456,0,0,0,0,0,1.42636905040718,1.88215698667853,4.31500277355805,1.43248770591916,0,0,0,0,0.508189248444927,2.60279707715243,0,0.502548796003046,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,3.95144636908534,2.67643483195743,2.05013139544115,5.38850508966481,0,0,1.03473071292505,0,0.368738337083406,2.5196248195744,0,0.343143423810856,0,0,0,0,0,0,5.21026396419431,1.84154367945675,3.08726103876381,4.74114852246094,4.60536524160033,3.69964018630297,5.93672265779964,0.154209693802656,0.532685175939381,0.164254312027618,1.03850885836724,0.116210378459959,0.604297247958111,0,0,1.7222167224691,2.00300284807389,1.57349297951309,0,0.0770153371044148,0.784349769176855,1.46139224653261,0.527758144464379,0,0.170093705276516,0.215915916102139,0,2.70946437543853,0,0,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.721287081534056,0,0,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0.929691098594572,5.66662224295152,0,0,1.59691809095107,0,0.37064843820784,1.28812398067792,0,0,0.190630193923825,1.27948895655667,0,1.59101623962968,0,0.899362287916574,1.37268514868027,0.942499218765491,0.404364963146632,4.75530963519025,0,0.48763373908959,0,1.05650146756755,2.59349831675173,2.40389234321312,2.26016233240486,1.65409603063837,0.66343897524122,1.31535265576129,0,0,5.0727594240676,4.64735247149625,4.50712964051586,6.45351084918232,10.8073945114433,6.06340787518125,1.06428319221179,0.211107635297664,0,0.379473173765715,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0.296964680832639,0,3.97659059106519,1.68803299692615,0,0,0,0.19924798825107,0.552567831062295,0,0,0,1.86623752597084,0,0,0,0.690503839458535,0,0,0.969332746095218,2.31920245404628,1.99613798001194,0,0,0,0,0,0,0,0,0,0.885741385813839,1.4471572635049,0,0.221158519862449,0.591095237907095,2.19385397153973,0,0,0.538651809526579,0,0,0,0,0,3.11431817566332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796118080530053,0,0,0,0,0.943615861729479,0,0.234264445725339,0,0,0,0,0,1.83643656978294,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0.19351266257817,0.365446585430928,0.164230914106418,0,0,0.225980740780532,0,0,2.02594547058812,0,0,0.426905989478705,0.39961921916426,0,0,1.37275998289572,0,0,0,0,0,0,0,0.600420288709789,1.23214841002794,0,0.859530882839914,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,0.720599767084807,0,0,0,0,0,0,1.59045937961861,1.77064427945048,0.160753148465019,0,0,0,0,3.28047605953333,0,0.236417121897595,0.104909176269996,0,0,0,0.714695326373367,0,0,14.6609892473502,15.5559868416228,10.7773828836105,3.59190574687462,0,3.40776043570843,0,0.293104467356165,0,0.646414781807753,0.79339561045614,0,0,2.66968531419237,1.72924735609633,4.14239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,1.22026264901963,2.3786276834235,1.72022758707021,1.22021956690538,0.993542447062135,0,0,0,0,0,0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| |||
|short_description=p2@SSTR1 | |||
}} |
Revision as of 19:51, 11 January 2014
Short description: | p2@SSTR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SSTR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 336bp_to_uc010amu.1_5end |
EntrezGene: | SSTR1 |
HGNC: | 11330 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 7.90e-17 | 23 |
fibroblast | 1.29e-13 | 76 |
smooth muscle cell | 2.18e-09 | 43 |
smooth muscle myoblast | 2.18e-09 | 43 |
muscle precursor cell | 1.36e-08 | 58 |
myoblast | 1.36e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.36e-08 | 58 |
vascular associated smooth muscle cell | 2.48e-08 | 32 |
smooth muscle cell of the umbilical artery | 5.82e-07 | 4 |
muscle cell | 7.64e-07 | 55 |
preadipocyte | 9.97e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.89e-09 | 5 |
myotonic disease | 8.89e-09 | 5 |
muscle tissue disease | 8.89e-09 | 5 |
myopathy | 8.89e-09 | 5 |
muscular disease | 8.89e-09 | 5 |
myotonic dystrophy | 8.89e-09 | 5 |
ovarian cancer | 6.80e-07 | 14 |