FFCP PHASE1:Hg19::chr15:92459275..92459283,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C298 | |||
|description=CAGE_peak_at_chr15:92459275..92459283,+ | |||
|id=chr15:92459275..92459283,+ | |||
|ontology_enrichment_celltype=CL:0000242!2.77e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.81e-40;1!CL:0000164;1.81e-40;1!CL:0000502;1.81e-40;1!CL:0000172;1.81e-40;1!CL:0000173;1.81e-40;1!CL:0000235;6.55e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.48e-40,1;CL:0000164,1.48e-40,1;CL:0000502,1.48e-40,1;CL:0000172,1.48e-40,1;CL:0000173,1.48e-40,1;CL:0002351,1.48e-40,1;CL:0000235,6.78e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002351;1.81e-40;1!UBERON:0005425;3.30e-40;1!UBERON:0003056;2.09e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.81e-40;1!DOID:5409;2.80e-11;4!DOID:4362;2.53e-09;5!DOID:169;6.55e-08;6!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.48e-40,1;DOID:5409,2.80e-11,4;DOID:4362,2.53e-09,5;DOID:169,6.34e-08,6;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;3.30e-40;1!UBERON:0001785;3.30e-40;1!UBERON:0002464;3.30e-40;1!UBERON:0004904;3.30e-40;1!UBERON:0001021;3.30e-40;1!UBERON:0003714;6.96e-21;2!UBERON:0005162;6.96e-21;2!UBERON:0000122;6.96e-21;2!UBERON:0000002;5.54e-08;6!UBERON:0001560;5.54e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.30e-40,1;UBERON:0001785,3.30e-40,1;UBERON:0002464,3.30e-40,1;UBERON:0004904,3.30e-40,1;UBERON:0001021,3.30e-40,1;UBERON:0003902,3.30e-40,1;UBERON:0005425,3.30e-40,1;UBERON:0003714,6.96e-21,2;UBERON:0005162,6.96e-21,2;UBERON:0000122,6.96e-21,2;UBERON:0001781,3.79e-11,4;UBERON:0000002,5.54e-08,6;UBERON:0001560,5.54e-08,6;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343189995723929,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.88969961156001,0,0,0,0,4.98177383770023,0,0,0.940634592723046,0,2.59244201811789,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:92459275..92459283,+ | |||
}} |
Revision as of 01:20, 12 January 2014
Short description: | p@chr15:92459275..92459283, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:92459275..92459283, + |
Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.48e-40 | 1 |
enteroendocrine cell | 1.48e-40 | 1 |
type D enteroendocrine cell | 1.48e-40 | 1 |
somatostatin secreting cell | 1.48e-40 | 1 |
pancreatic D cell | 1.48e-40 | 1 |
progenitor cell of endocrine pancreas | 1.48e-40 | 1 |
macrophage | 6.78e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.30e-40 | 1 |
cranial nerve | 3.30e-40 | 1 |
nerve trunk | 3.30e-40 | 1 |
nerve connecting eye with brain | 3.30e-40 | 1 |
nerve | 3.30e-40 | 1 |
retinal neural layer | 3.30e-40 | 1 |
presumptive neural retina | 3.30e-40 | 1 |
neural tissue | 6.96e-21 | 2 |
multi cell component structure | 6.96e-21 | 2 |
neuron projection bundle | 6.96e-21 | 2 |
layer of retina | 3.79e-11 | 4 |
uterine cervix | 5.54e-08 | 6 |
neck of organ | 5.54e-08 | 6 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.48e-40 | 1 |
lung small cell carcinoma | 2.80e-11 | 4 |
cervical cancer | 2.53e-09 | 5 |
neuroendocrine tumor | 6.34e-08 | 6 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |