FFCP PHASE1:Hg19::chr6:12577789..12577820,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:12577789..12577820,- | |||
|id=chr6:12577789..12577820,- | |||
|ontology_enrichment_celltype=CL:0000317!4.18e-10!2;CL:1000448!4.18e-10!2;CL:0002308!4.18e-10!2;CL:0002140!4.18e-10!2;CL:0000066!1.61e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000317;3.96e-66;2!CL:1000448;3.96e-66;2!CL:0002308;3.96e-66;2!CL:0002140;3.96e-66;2!CL:0000622;3.11e-27;5!CL:0000154;6.78e-23;6!CL:0002535;5.48e-18;2!CL:0000150;1.22e-15;9!CL:0000362;1.22e-15;9!CL:0002159;1.99e-10;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,5.53e-66,2;CL:1000448,5.53e-66,2;CL:0002308,5.53e-66,2;CL:0002140,5.53e-66,2;CL:0000622,3.55e-27,5;CL:0000154,7.58e-23,6;CL:0002535,5.48e-18,2;CL:0000150,1.31e-15,9;CL:0000362,1.31e-15,9;CL:0002159,2.08e-10,14 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.05e-34;1!UBERON:0003056;2.59e-12;3 | |||
|ontology_enrichment_disease=DOID:1749!2.08e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:4362;5.35e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,5.35e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002419!4.18e-10!2;UBERON:0007771!4.18e-10!2;UBERON:0003297!4.18e-10!2;UBERON:0001821!4.18e-10!2;UBERON:0003487!4.18e-10!2;UBERON:0001820!4.18e-10!2;UBERON:0005089!4.18e-10!2;UBERON:0005088!4.18e-10!2;UBERON:0000488!8.18e-10!4;UBERON:0001737!2.24e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;3.96e-66;2!UBERON:0007771;3.96e-66;2!UBERON:0003297;3.96e-66;2!UBERON:0001821;3.96e-66;2!UBERON:0003487;3.96e-66;2!UBERON:0001820;3.96e-66;2!UBERON:0000941;5.05e-34;1!UBERON:0001785;5.05e-34;1!UBERON:0002464;5.05e-34;1!UBERON:0004904;5.05e-34;1!UBERON:0001021;5.05e-34;1!UBERON:0006955;5.48e-18;2!UBERON:0004801;5.48e-18;2!UBERON:0003714;9.07e-18;2!UBERON:0005162;9.07e-18;2!UBERON:0000122;9.07e-18;2!UBERON:0002365;1.21e-10;31!UBERON:0002330;1.21e-10;31!UBERON:0001003;8.46e-10;15!UBERON:0007376;8.46e-10;15!UBERON:0000002;7.17e-07;6!UBERON:0001560;7.17e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,5.53e-66,2;UBERON:0007771,5.53e-66,2;UBERON:0003297,5.53e-66,2;UBERON:0001821,5.53e-66,2;UBERON:0003487,5.53e-66,2;UBERON:0001820,5.53e-66,2;UBERON:0005089,5.53e-66,2;UBERON:0005088,5.53e-66,2;UBERON:0000941,2.58e-34,1;UBERON:0001785,2.58e-34,1;UBERON:0002464,2.58e-34,1;UBERON:0004904,2.58e-34,1;UBERON:0001021,2.58e-34,1;UBERON:0003902,2.58e-34,1;UBERON:0005425,2.58e-34,1;UBERON:0006955,5.48e-18,2;UBERON:0004801,5.48e-18,2;UBERON:0003714,6.48e-18,2;UBERON:0005162,6.48e-18,2;UBERON:0000122,6.48e-18,2;UBERON:0005085,2.44e-10,31;UBERON:0002365,2.68e-10,31;UBERON:0002330,2.68e-10,31;UBERON:0001003,8.85e-10,15;UBERON:0007376,8.85e-10,15;UBERON:0007383,8.85e-10,15;UBERON:0001781,1.22e-09,4;UBERON:0000002,7.17e-07,6;UBERON:0001560,7.17e-07,6;UBERON:0000966,7.58e-07,6;UBERON:0005388,7.58e-07,6;UBERON:0001802,7.58e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.702678285545008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,1.14853107599234,1.30012049207304,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,2.35059857767087,0,0,0,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0.191915197319445,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0.231051332300676,0,0,0,0,0.80682027481408,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:12577789..12577820,- | |||
}} |
Revision as of 10:03, 22 January 2014
Short description: | p@chr6:12577789..12577820, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:12577789..12577820, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 5.53e-66 | 2 |
epithelial cell of sweat gland | 5.53e-66 | 2 |
epithelial cell of skin gland | 5.53e-66 | 2 |
acinar cell of sebaceous gland | 5.53e-66 | 2 |
acinar cell | 3.55e-27 | 5 |
protein secreting cell | 7.58e-23 | 6 |
epithelial cell of cervix | 5.48e-18 | 2 |
glandular epithelial cell | 1.31e-15 | 9 |
epidermal cell | 1.31e-15 | 9 |
general ecto-epithelial cell | 2.08e-10 | 14 |
Ontology term | p-value | n |
---|---|---|
skin gland | 5.53e-66 | 2 |
epidermis gland | 5.53e-66 | 2 |
gland of integumental system | 5.53e-66 | 2 |
sebaceous gland | 5.53e-66 | 2 |
skin sebaceous gland | 5.53e-66 | 2 |
sweat gland | 5.53e-66 | 2 |
sweat gland placode | 5.53e-66 | 2 |
sebaceous gland placode | 5.53e-66 | 2 |
cranial nerve II | 2.58e-34 | 1 |
cranial nerve | 2.58e-34 | 1 |
nerve trunk | 2.58e-34 | 1 |
nerve connecting eye with brain | 2.58e-34 | 1 |
nerve | 2.58e-34 | 1 |
retinal neural layer | 2.58e-34 | 1 |
presumptive neural retina | 2.58e-34 | 1 |
uterine epithelium | 5.48e-18 | 2 |
cervix epithelium | 5.48e-18 | 2 |
neural tissue | 6.48e-18 | 2 |
multi cell component structure | 6.48e-18 | 2 |
neuron projection bundle | 6.48e-18 | 2 |
ectodermal placode | 2.44e-10 | 31 |
exocrine gland | 2.68e-10 | 31 |
exocrine system | 2.68e-10 | 31 |
skin epidermis | 8.85e-10 | 15 |
outer epithelium | 8.85e-10 | 15 |
enveloping layer of ectoderm | 8.85e-10 | 15 |
layer of retina | 1.22e-09 | 4 |
uterine cervix | 7.17e-07 | 6 |
neck of organ | 7.17e-07 | 6 |
retina | 7.58e-07 | 6 |
photoreceptor array | 7.58e-07 | 6 |
posterior segment of eyeball | 7.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 5.35e-08 | 5 |