FFCP PHASE1:Hg19::chr10:115992287..115992296,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:115992287..115992296,+ | |||
|coexpression_cluster_id=C2981 | |||
|description=CAGE_peak_at_chr10:115992287..115992296,+ | |description=CAGE_peak_at_chr10:115992287..115992296,+ | ||
|id=chr10:115992287..115992296,+ | |id=chr10:115992287..115992296,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.02e-09;7!CL:0000586;1.02e-09;7!CL:0000047;6.67e-09;2!CL:0002561;6.67e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.95e-10,7;CL:0000586,9.95e-10,7;CL:0002561,5.49e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.78e-16;1!UBERON:0009117;1.65e-14;10!UBERON:0005564;1.65e-14;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;4.72e-17;1!DOID:1357;4.72e-17;1!DOID:3151;8.85e-17;1!DOID:3149;8.85e-17;1!DOID:3451;4.70e-09;2!DOID:4159;4.70e-09;2!DOID:0060122;4.70e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,4.72e-17,1;DOID:1357,4.72e-17,1;DOID:3151,8.86e-17,1;DOID:3149,8.86e-17,1;DOID:3451,4.70e-09,2;DOID:4159,4.70e-09,2;DOID:0060122,4.70e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.32e-07!8;UBERON:0003135!3.90e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.74e-18;8!UBERON:0001764;4.72e-17;1!UBERON:0001825;4.72e-17;1!UBERON:0000941;1.78e-16;1!UBERON:0001785;1.78e-16;1!UBERON:0002464;1.78e-16;1!UBERON:0004904;1.78e-16;1!UBERON:0001021;1.78e-16;1!UBERON:0003135;3.01e-13;11!UBERON:0003714;6.67e-09;2!UBERON:0005162;6.67e-09;2!UBERON:0000122;6.67e-09;2!UBERON:0005933;6.67e-09;2!UBERON:0005942;6.67e-09;2!UBERON:0005932;6.67e-09;2!UBERON:0000991;3.31e-07;21!UBERON:0003101;6.68e-07;22!UBERON:0000079;6.68e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.58e-18,8;UBERON:0001764,4.72e-17,1;UBERON:0001825,4.72e-17,1;UBERON:0000941,1.93e-16,1;UBERON:0001785,1.93e-16,1;UBERON:0002464,1.93e-16,1;UBERON:0004904,1.93e-16,1;UBERON:0001021,1.93e-16,1;UBERON:0003902,1.93e-16,1;UBERON:0005425,1.93e-16,1;UBERON:0003135,2.95e-13,11;UBERON:0005933,5.49e-09,2;UBERON:0005942,5.49e-09,2;UBERON:0005932,5.49e-09,2;UBERON:0003714,6.94e-09,2;UBERON:0005162,6.94e-09,2;UBERON:0000122,6.94e-09,2;UBERON:0000991,3.28e-07,21;UBERON:0009196,3.28e-07,21;UBERON:0009117,3.28e-07,21;UBERON:0005564,3.28e-07,21;UBERON:0004176,6.62e-07,22;UBERON:0003101,6.62e-07,22;UBERON:0000079,6.62e-07,22 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0,1.01207876807801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,0,0,0,0,0,0,0,0,1.87296046098192,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0.286804595389004,0.365921118388786,0,0,0.207322110030741,0,0,0,0,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0.713715955188647,0,0.234282829985426,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,2.34804281319486,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43921794625961,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,1.72742072974897,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60330443159336,0.0918948995348449,3.0084904715085,0.985123076837112,5.62724673327975,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0,0,0,0.222820913770347,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0,1.01207876807801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0.715471872916026,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.529636723252875,0,0.354668382198357,0,0,0,0,0,0,0,0,0,1.87296046098192,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0.504867548488229,0,0,0,0,0,0,0,0.286804595389004,0.365921118388786,0,0,0.207322110030741,0,0,0,0,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.167516265334349,0,0,0,0,0,0,0,0,0.713715955188647,0,0.234282829985426,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0,0,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,0.78494864019923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0.669514372325618,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0,0,0,0,0,2.34804281319486,0.0788057072991982,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43921794625961,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.235479278551542,0,0,0,1.72742072974897,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0.22589216407792,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60330443159336,0.0918948995348449,3.0084904715085,0.985123076837112,5.62724673327975,0,0,0,0,0,0,0,0,0,0.435433495793923,0.342233301085281,0,0.215166616178029,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr10:115992287..115992296,+ | |short_description=p@chr10:115992287..115992296,+ | ||
}} | }} |
Latest revision as of 10:38, 23 July 2015
Short description: | p@chr10:115992287..115992296, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:115992287..115992296, + |
Coexpression cluster: | C2981_maxillary_testicular_testis_renal_keratoacanthoma_liposarcoma_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.95e-10 | 7 |
germ cell | 9.95e-10 | 7 |
outer root sheath cell | 5.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 5.58e-18 | 8 |
maxillary sinus | 4.72e-17 | 1 |
paranasal sinus | 4.72e-17 | 1 |
cranial nerve II | 1.93e-16 | 1 |
cranial nerve | 1.93e-16 | 1 |
nerve trunk | 1.93e-16 | 1 |
nerve connecting eye with brain | 1.93e-16 | 1 |
nerve | 1.93e-16 | 1 |
retinal neural layer | 1.93e-16 | 1 |
presumptive neural retina | 1.93e-16 | 1 |
male reproductive organ | 2.95e-13 | 11 |
hair root sheath | 5.49e-09 | 2 |
hair outer root sheath | 5.49e-09 | 2 |
bulb of hair follicle | 5.49e-09 | 2 |
neural tissue | 6.94e-09 | 2 |
multi cell component structure | 6.94e-09 | 2 |
neuron projection bundle | 6.94e-09 | 2 |
gonad | 3.28e-07 | 21 |
indifferent external genitalia | 3.28e-07 | 21 |
indifferent gonad | 3.28e-07 | 21 |
gonad primordium | 3.28e-07 | 21 |
external genitalia | 6.62e-07 | 22 |
male organism | 6.62e-07 | 22 |
male reproductive system | 6.62e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 4.72e-17 | 1 |
maxillary sinus cancer | 4.72e-17 | 1 |
skin squamous cell carcinoma | 8.86e-17 | 1 |
keratoacanthoma | 8.86e-17 | 1 |
skin carcinoma | 4.70e-09 | 2 |
skin cancer | 4.70e-09 | 2 |
integumentary system cancer | 4.70e-09 | 2 |