FFCP PHASE1:Hg19::chr10:32034632..32034634,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:32034632..32034634,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr10:32034632..32034634,- | |||
|id=chr10:32034632..32034634,- | |||
|ontology_enrichment_celltype=CL:0002057!2.02e-34!42;CL:0000860!8.22e-32!45;CL:0002194!2.23e-23!63;CL:0000576!2.23e-23!63;CL:0000040!2.23e-23!63;CL:0000559!2.23e-23!63;CL:0000766!5.46e-23!76;CL:0002009!1.61e-22!65;CL:0000839!1.37e-20!70;CL:0000557!3.10e-20!71;CL:0002087!1.17e-15!119;CL:0000738!3.49e-15!140;CL:0000763!5.75e-14!112;CL:0000049!5.75e-14!112;CL:0000988!1.46e-13!182;CL:0002031!2.08e-13!124;CL:0000037!3.00e-11!172;CL:0000566!3.00e-11!172;CL:0002032!7.15e-11!165;CL:0000837!7.15e-11!165;CL:0000048!5.54e-10!430;CL:0002320!6.50e-10!365;CL:0000723!1.01e-09!436;CL:0000134!1.89e-09!358;CL:0000034!2.20e-09!444;CL:0000219!1.27e-08!390;CL:0000188!2.87e-07!9;CL:0002371!3.55e-07!591;CL:0000767!7.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.31e-30;6!CL:0002397;1.31e-30;6!CL:0000576;2.79e-17;48!CL:0000860;1.87e-14;33!CL:0002057;1.87e-14;33!CL:0000766;5.11e-13;69!CL:0002262;3.18e-11;2!CL:1000398;3.18e-11;2!CL:0000473;2.62e-10;39!CL:0000234;2.62e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.91e-30,42;CL:0002057,6.91e-30,42;CL:0000473,3.94e-26,48;CL:0000234,3.94e-26,48;CL:0002194,7.29e-21,59;CL:0000576,7.29e-21,59;CL:0000040,7.29e-21,59;CL:0000559,7.29e-21,59;CL:0002393,8.88e-21,9;CL:0002397,8.88e-21,9;CL:0002009,3.49e-20,61;CL:0000839,1.17e-18,66;CL:0000557,2.22e-18,67;CL:0000766,4.20e-17,72;CL:0000763,2.41e-11,108;CL:0000049,2.41e-11,108;CL:0002262,3.35e-11,2;CL:1000398,3.35e-11,2;CL:0002087,1.23e-10,115;CL:0002031,3.52e-10,120;CL:0000738,6.11e-09,136;CL:0002032,1.73e-07,161;CL:0000837,1.73e-07,161;CL:0000037,3.70e-07,168;CL:0000988,9.05e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.48e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.91e-17!80;UBERON:0001474!6.57e-16!86;UBERON:0002390!1.07e-15!102;UBERON:0003061!1.07e-15!102;UBERON:0002193!7.62e-14!112;UBERON:0004765!7.23e-13!101;UBERON:0001434!7.23e-13!101;UBERON:0002405!4.22e-12!115;UBERON:0002204!1.36e-11!167;UBERON:0002384!2.00e-09!375;UBERON:0003081!1.27e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;3.18e-11;2!UBERON:0003497;3.18e-11;2!UBERON:0003909;3.18e-11;2!UBERON:0003835;3.18e-11;2!UBERON:0001280;6.56e-08;3!UBERON:0004647;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.37e-16,76;UBERON:0001474,5.25e-15,82;UBERON:0004765,1.17e-13,90;UBERON:0002405,3.27e-13,93;UBERON:0002390,1.58e-12,98;UBERON:0003061,1.58e-12,98;UBERON:0001434,2.85e-12,100;UBERON:0002193,2.41e-11,108;UBERON:0001281,3.35e-11,2;UBERON:0003497,3.35e-11,2;UBERON:0003909,3.35e-11,2;UBERON:0003835,3.35e-11,2;UBERON:0003081,2.88e-09,203;UBERON:0001280,6.78e-08,3;UBERON:0004647,6.78e-08,3;UBERON:0005171,6.78e-08,3;UBERON:0002204,3.34e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,4.43196326825502,2.80762226458198,1.73608696572681,0,0,0,0,0,0,0.697287110717054,1.6446715520873,0.619412741790207,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0.376484679085209,0,0,1.53041946185451,1.60464513538047,0.639337125799041,0,0,0,1.16083695451434,0,1.24564449799115,0.251248665256743,0,0.434377689410233,0,0.736555271975129,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:32034632..32034634,- | |||
}} |
Latest revision as of 13:14, 23 July 2015
Short description: | p@chr10:32034632..32034634, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:32034632..32034634, - |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.91e-30 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.91e-30 | 42 |
defensive cell | 3.94e-26 | 48 |
phagocyte | 3.94e-26 | 48 |
monopoietic cell | 7.29e-21 | 59 |
monocyte | 7.29e-21 | 59 |
monoblast | 7.29e-21 | 59 |
promonocyte | 7.29e-21 | 59 |
intermediate monocyte | 8.88e-21 | 9 |
CD14-positive, CD16-positive monocyte | 8.88e-21 | 9 |
macrophage dendritic cell progenitor | 3.49e-20 | 61 |
myeloid lineage restricted progenitor cell | 1.17e-18 | 66 |
granulocyte monocyte progenitor cell | 2.22e-18 | 67 |
myeloid leukocyte | 4.20e-17 | 72 |
myeloid cell | 2.41e-11 | 108 |
common myeloid progenitor | 2.41e-11 | 108 |
endothelial cell of sinusoid | 3.35e-11 | 2 |
endothelial cell of hepatic sinusoid | 3.35e-11 | 2 |
nongranular leukocyte | 1.23e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 3.52e-10 | 120 |
leukocyte | 6.11e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.73e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.73e-07 | 161 |
hematopoietic stem cell | 3.70e-07 | 168 |
hematopoietic cell | 9.05e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.37e-16 | 76 |
bone element | 5.25e-15 | 82 |
skeletal element | 1.17e-13 | 90 |
immune system | 3.27e-13 | 93 |
hematopoietic system | 1.58e-12 | 98 |
blood island | 1.58e-12 | 98 |
skeletal system | 2.85e-12 | 100 |
hemolymphoid system | 2.41e-11 | 108 |
hepatic sinusoid | 3.35e-11 | 2 |
abdomen blood vessel | 3.35e-11 | 2 |
sinusoid | 3.35e-11 | 2 |
abdominal segment blood vessel | 3.35e-11 | 2 |
lateral plate mesoderm | 2.88e-09 | 203 |
liver parenchyma | 6.78e-08 | 3 |
liver lobule | 6.78e-08 | 3 |
hepatic duct | 6.78e-08 | 3 |
musculoskeletal system | 3.34e-07 | 167 |