FFCP PHASE1:Hg19::chr10:73588656..73588715,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:73588656..73588715,- | |||
|coexpression_cluster_id=C143 | |||
|description=CAGE_peak_at_chr10:73588656..73588715,- | |description=CAGE_peak_at_chr10:73588656..73588715,- | ||
|id=chr10:73588656..73588715,- | |id=chr10:73588656..73588715,- | ||
|ontology_enrichment_celltype=CL:0000766!8.36e-26!76;CL:0002057!1.23e-25!42;CL:0002194!1.21e-23!63;CL:0000576!1.21e-23!63;CL:0000040!1.21e-23!63;CL:0000559!1.21e-23!63;CL:0000860!4.26e-23!45;CL:0002009!1.84e-22!65;CL:0000839!2.67e-22!70;CL:0000557!5.65e-22!71;CL:0000763!1.44e-07!112;CL:0000049!1.44e-07!112 | |ontology_enrichment_celltype=CL:0000766!8.36e-26!76;CL:0002057!1.23e-25!42;CL:0002194!1.21e-23!63;CL:0000576!1.21e-23!63;CL:0000040!1.21e-23!63;CL:0000559!1.21e-23!63;CL:0000860!4.26e-23!45;CL:0002009!1.84e-22!65;CL:0000839!2.67e-22!70;CL:0000557!5.65e-22!71;CL:0000763!1.44e-07!112;CL:0000049!1.44e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.72e-20;39!CL:0000234;2.72e-20;39!CL:0000860;4.31e-20;33!CL:0002057;4.31e-20;33!CL:0000576;3.58e-16;48!CL:0000766;1.20e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.03e-30,48;CL:0000234,4.03e-30,48;CL:0000766,1.04e-29,72;CL:0002194,7.71e-28,59;CL:0000576,7.71e-28,59;CL:0000040,7.71e-28,59;CL:0000559,7.71e-28,59;CL:0002009,2.59e-26,61;CL:0000860,4.69e-26,42;CL:0002057,4.69e-26,42;CL:0000839,8.78e-26,66;CL:0000557,1.69e-25,67;CL:0000763,3.39e-09,108;CL:0000049,3.39e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;3.69e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.47e-18!216;UBERON:0002371!1.07e-17!80;UBERON:0002193!1.92e-16!112;UBERON:0002405!2.17e-16!115;UBERON:0001474!1.14e-15!86;UBERON:0002390!1.55e-15!102;UBERON:0003061!1.55e-15!102;UBERON:0000926!1.28e-13!448;UBERON:0004120!1.28e-13!448;UBERON:0006603!1.28e-13!448;UBERON:0000468!1.69e-13!659;UBERON:0004765!2.48e-13!101;UBERON:0001434!2.48e-13!101;UBERON:0000467!4.95e-12!625;UBERON:0000480!6.13e-12!626;UBERON:0002050!3.55e-10!605;UBERON:0005423!3.55e-10!605;UBERON:0000923!4.34e-10!604;UBERON:0005291!4.34e-10!604;UBERON:0006598!4.34e-10!604;UBERON:0002532!4.34e-10!604;UBERON:0000922!4.89e-10!612;UBERON:0000062!2.51e-09!511;UBERON:0002204!1.02e-08!167 | |ontology_enrichment_uberon=UBERON:0003081!7.47e-18!216;UBERON:0002371!1.07e-17!80;UBERON:0002193!1.92e-16!112;UBERON:0002405!2.17e-16!115;UBERON:0001474!1.14e-15!86;UBERON:0002390!1.55e-15!102;UBERON:0003061!1.55e-15!102;UBERON:0000926!1.28e-13!448;UBERON:0004120!1.28e-13!448;UBERON:0006603!1.28e-13!448;UBERON:0000468!1.69e-13!659;UBERON:0004765!2.48e-13!101;UBERON:0001434!2.48e-13!101;UBERON:0000467!4.95e-12!625;UBERON:0000480!6.13e-12!626;UBERON:0002050!3.55e-10!605;UBERON:0005423!3.55e-10!605;UBERON:0000923!4.34e-10!604;UBERON:0005291!4.34e-10!604;UBERON:0006598!4.34e-10!604;UBERON:0002532!4.34e-10!604;UBERON:0000922!4.89e-10!612;UBERON:0000062!2.51e-09!511;UBERON:0002204!1.02e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.61e-22,315;UBERON:0004120,8.61e-22,315;UBERON:0006603,8.61e-22,315;UBERON:0002371,9.22e-21,76;UBERON:0003081,9.95e-21,203;UBERON:0002405,1.95e-19,93;UBERON:0002193,1.04e-18,108;UBERON:0001474,2.59e-18,82;UBERON:0004765,3.71e-18,90;UBERON:0002390,5.35e-18,98;UBERON:0003061,5.35e-18,98;UBERON:0001434,4.52e-16,100;UBERON:0000923,3.27e-11,560;UBERON:0010316,3.27e-11,560;UBERON:0005291,3.27e-11,560;UBERON:0006598,3.27e-11,560;UBERON:0010317,3.27e-11,560;UBERON:0002532,3.27e-11,560;UBERON:0002050,6.81e-11,564;UBERON:0002204,1.91e-10,167;UBERON:0005423,1.02e-09,581;UBERON:0000922,1.51e-09,592 | |||
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| ||
|short_description=p@chr10:73588656..73588715,- | |short_description=p@chr10:73588656..73588715,- | ||
}} | }} |
Latest revision as of 15:19, 23 July 2015
Short description: | p@chr10:73588656..73588715, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:73588656..73588715, - |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.03e-30 | 48 |
phagocyte | 4.03e-30 | 48 |
myeloid leukocyte | 1.04e-29 | 72 |
monopoietic cell | 7.71e-28 | 59 |
monocyte | 7.71e-28 | 59 |
monoblast | 7.71e-28 | 59 |
promonocyte | 7.71e-28 | 59 |
macrophage dendritic cell progenitor | 2.59e-26 | 61 |
classical monocyte | 4.69e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.69e-26 | 42 |
myeloid lineage restricted progenitor cell | 8.78e-26 | 66 |
granulocyte monocyte progenitor cell | 1.69e-25 | 67 |
myeloid cell | 3.39e-09 | 108 |
common myeloid progenitor | 3.39e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.61e-22 | 315 |
mesoderm-derived structure | 8.61e-22 | 315 |
presumptive mesoderm | 8.61e-22 | 315 |
bone marrow | 9.22e-21 | 76 |
lateral plate mesoderm | 9.95e-21 | 203 |
immune system | 1.95e-19 | 93 |
hemolymphoid system | 1.04e-18 | 108 |
bone element | 2.59e-18 | 82 |
skeletal element | 3.71e-18 | 90 |
hematopoietic system | 5.35e-18 | 98 |
blood island | 5.35e-18 | 98 |
skeletal system | 4.52e-16 | 100 |
germ layer | 3.27e-11 | 560 |
germ layer / neural crest | 3.27e-11 | 560 |
embryonic tissue | 3.27e-11 | 560 |
presumptive structure | 3.27e-11 | 560 |
germ layer / neural crest derived structure | 3.27e-11 | 560 |
epiblast (generic) | 3.27e-11 | 560 |
embryonic structure | 6.81e-11 | 564 |
musculoskeletal system | 1.91e-10 | 167 |
developing anatomical structure | 1.02e-09 | 581 |
embryo | 1.51e-09 | 592 |