FFCP PHASE1:Hg19::chr10:8093191..8093214,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-289bp_to_ENST00000418270_5end | |||
|cluster_id=chr10:8093191..8093214,+ | |||
|coexpression_cluster_id=C194 | |||
|description=CAGE_peak_1_at_ENST00000418270_5end | |||
|id=chr10:8093191..8093214,+ | |||
|ontology_enrichment_celltype=CL:0000349!6.59e-09!3;CL:0002577!6.59e-09!3;CL:0002541!1.42e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;8.89e-26;19!CL:0002577;7.21e-17;3!CL:0002541;2.04e-16;3!CL:0000333;2.13e-10;5!CL:0002537;7.02e-10;5!CL:0000039;1.94e-07;7!CL:0000586;1.94e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,9.53e-26,19;CL:0002577,6.48e-17,3;CL:0002541,3.21e-16,3;CL:0002537,5.57e-10,5;CL:0000039,1.66e-07,7;CL:0000586,1.66e-07,7 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.08e-12;2!UBERON:0008425;4.85e-07;1!UBERON:0005754;5.58e-07;1 | |||
|ontology_enrichment_disease=DOID:5093!7.40e-12!4;DOID:1612!7.40e-12!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;4.48e-23;4!DOID:1612;4.48e-23;4!DOID:3095;2.99e-11;22!DOID:2994;2.99e-11;22!DOID:169;9.71e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.36e-23,4;DOID:1612,4.36e-23,4;DOID:3095,2.74e-11,22;DOID:2994,2.74e-11,22;DOID:169,1.01e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.82e-24!14;UBERON:0000158!1.82e-24!14;UBERON:0003124!6.51e-18!7;UBERON:0000478!5.45e-13!24;UBERON:0001987!4.88e-11!4;UBERON:0004340!4.88e-11!4;UBERON:0006947!4.35e-09!3;UBERON:0004054!4.35e-09!3;UBERON:0000305!4.75e-09!7;UBERON:0006554!8.23e-09!44;UBERON:0000476!1.42e-08!3;UBERON:0000920!1.42e-08!3;UBERON:0001008!1.55e-08!45;UBERON:0000365!3.23e-08!5;UBERON:0004871!7.33e-08!8;UBERON:0005904!7.05e-07!4;UBERON:0000489!7.23e-07!32;UBERON:0005910!7.76e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.44e-24;10!UBERON:0000158;1.44e-24;10!UBERON:0000478;4.95e-20;24!UBERON:0006947;2.79e-17;3!UBERON:0004054;2.79e-17;3!UBERON:0003124;2.04e-16;3!UBERON:0000920;2.04e-16;3!UBERON:0005904;4.34e-13;4!UBERON:0001987;8.78e-13;4!UBERON:0000305;5.74e-12;7!UBERON:0000013;2.13e-10;5!UBERON:0002410;2.13e-10;5!UBERON:0000310;2.76e-09;10!UBERON:0001443;1.91e-08;11!UBERON:0000998;5.58e-07;1!UBERON:0006868;5.58e-07;1!UBERON:0001000;7.18e-07;1!UBERON:0005352;7.18e-07;1!UBERON:0001301;8.49e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.40e-35,14;UBERON:0000158,1.40e-35,14;UBERON:0003124,8.43e-27,7;UBERON:0000478,5.23e-20,24;UBERON:0006947,2.72e-17,3;UBERON:0004054,2.72e-17,3;UBERON:0000920,3.21e-16,3;UBERON:0005904,4.25e-13,4;UBERON:0001987,8.11e-13,4;UBERON:0004340,8.11e-13,4;UBERON:0000305,5.11e-12,7;UBERON:0004871,1.56e-10,8;UBERON:0000013,2.23e-10,5;UBERON:0002410,2.23e-10,5;UBERON:0000310,2.73e-09,10;UBERON:0001443,1.90e-08,11;UBERON:0006554,1.03e-07,47;UBERON:0001008,1.60e-07,48;UBERON:0004923,1.72e-07,66;UBERON:0004175,2.47e-07,25;UBERON:0000998,5.75e-07,1;UBERON:0006868,5.75e-07,1;UBERON:0001000,6.80e-07,1;UBERON:0005352,6.80e-07,1;UBERON:0001301,8.49e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,7.68732152507698,0,0.443067789167242,0.270803863765016,1.92136979588513,3.77172107923647,1.15106533222573,2.48715016007264,0.579606171470105,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,42.6710374898009,46.3582527531231,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.7000822862803,1.66435439510497,5.44302527993425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,2.15252686335615,0,1.33029046061003,0.229723400206959,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,3.8605408508243,1.53580351049616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,7.812832832557,25.7132399988815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,3.22789466143284,1.97466817701499,22.9245954755437,3.19001159731919,1.09917112082235,3.19820865611181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,5.91876604274086,0,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,0,4.19344003780872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77380195455795,0,0,2.12775409707835,4.03900328639485,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0.387848869084652,0,0,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85998610953876,3.01909471910709,0,5.89732046236875,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83334686136996,0,0,0,0,0,0,0,0,0,0,0,0.535701835878287,0,0,0.227662191351298,0.79832133146375,0,0,0,0,0,0,0.706437835654626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.31451510420044,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41994405973866,0,0,0,0,0,0,0,0,33.0683087639851,0.101988829741982,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0.976839223331694,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENST00000418270 | |||
}} |
Latest revision as of 15:53, 23 July 2015
Short description: | p1@ENST00000418270 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000418270_5end |
Coexpression cluster: | C194_MCF7_breast_prostate_Intestinal_diffuse_Wilms_Alveolar |
Association with transcript: | -289bp_to_ENST00000418270_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 9.53e-26 | 19 |
placental epithelial cell | 6.48e-17 | 3 |
chorionic membrane mesenchymal stem cell | 3.21e-16 | 3 |
amnion mesenchymal stem cell | 5.57e-10 | 5 |
germ line cell | 1.66e-07 | 7 |
germ cell | 1.66e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.40e-35 | 14 |
membranous layer | 1.40e-35 | 14 |
chorion | 8.43e-27 | 7 |
extraembryonic structure | 5.23e-20 | 24 |
male genital duct | 2.72e-17 | 3 |
internal male genitalia | 2.72e-17 | 3 |
egg chorion | 3.21e-16 | 3 |
duct of male reproductive system | 4.25e-13 | 4 |
placenta | 8.11e-13 | 4 |
allantois | 8.11e-13 | 4 |
amnion | 5.11e-12 | 7 |
somatic layer of lateral plate mesoderm | 1.56e-10 | 8 |
sympathetic nervous system | 2.23e-10 | 5 |
autonomic nervous system | 2.23e-10 | 5 |
breast | 2.73e-09 | 10 |
chest | 1.90e-08 | 11 |
urinary system structure | 1.03e-07 | 47 |
renal system | 1.60e-07 | 48 |
organ component layer | 1.72e-07 | 66 |
internal genitalia | 2.47e-07 | 25 |
seminal vesicle | 5.75e-07 | 1 |
seminal fluid secreting gland | 5.75e-07 | 1 |
vas deferens | 6.80e-07 | 1 |
spermatic cord | 6.80e-07 | 1 |
epididymis | 8.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.36e-23 | 4 |
breast cancer | 4.36e-23 | 4 |
germ cell and embryonal cancer | 2.74e-11 | 22 |
germ cell cancer | 2.74e-11 | 22 |
neuroendocrine tumor | 1.01e-08 | 6 |