FFCP PHASE1:Hg19::chr11:76863678..76863731,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:76863678..76863731,+ | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_at_chr11:76863678..76863731,+ | |description=CAGE_peak_at_chr11:76863678..76863731,+ | ||
|id=chr11:76863678..76863731,+ | |id=chr11:76863678..76863731,+ | ||
|ontology_enrichment_celltype=CL:0000451!1.65e-08!10;CL:0000988!9.56e-08!182;CL:0000990!1.71e-07!8;CL:0002393!4.81e-07!9;CL:0002397!4.81e-07!9 | |ontology_enrichment_celltype=CL:0000451!1.65e-08!10;CL:0000988!9.56e-08!182;CL:0000990!1.71e-07!8;CL:0002393!4.81e-07!9;CL:0002397!4.81e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000453;5.01e-14;5!CL:0000990;3.30e-08;8!CL:0000451;7.15e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,4.69e-14,5;CL:0000988,1.66e-08,177;CL:0000990,3.18e-08,8;CL:0000451,6.94e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;5.26e-18;1!DOID:0060061;5.26e-18;1!DOID:8691;5.26e-18;1!DOID:0060058;1.33e-07;10!DOID:1240;9.80e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.26e-18,1;DOID:0060061,5.26e-18,1;DOID:8691,5.26e-18,1;DOID:2531,3.67e-08,51;DOID:0060083,3.67e-08,51;DOID:0060058,1.33e-07,10;DOID:1240,4.36e-07,39 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;1.22e-17;1!UBERON:0001961;1.22e-17;1!UBERON:0001744;1.22e-17;1!UBERON:0001042;1.22e-17;1!UBERON:0001735;1.22e-17;1!UBERON:0002331;8.23e-16;10!UBERON:0000178;9.44e-11;15!UBERON:0000179;9.44e-11;15!UBERON:0000463;9.44e-11;15!UBERON:0002370;1.71e-09;2!UBERON:0006562;1.71e-09;2!UBERON:0005058;1.71e-09;2!UBERON:0009113;1.71e-09;2!UBERON:0002390;8.58e-08;32!UBERON:0000478;6.35e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,1.22e-17,1;UBERON:0001961,1.22e-17,1;UBERON:0001744,1.22e-17,1;UBERON:0001735,1.22e-17,1;UBERON:0002331,8.23e-16,10;UBERON:0000358,8.23e-16,10;UBERON:0000307,8.23e-16,10;UBERON:0000091,8.23e-16,10;UBERON:0000087,8.23e-16,10;UBERON:0007010,8.23e-16,10;UBERON:0007806,8.23e-16,10;UBERON:0008780,8.23e-16,10;UBERON:0005728,8.23e-16,10;UBERON:0000178,9.44e-11,15;UBERON:0000179,9.44e-11,15;UBERON:0000463,9.44e-11,15;UBERON:0001042,1.73e-07,10;UBERON:0009145,1.73e-07,10;UBERON:0000478,6.35e-07,24;UBERON:0006562,6.94e-07,11 | |||
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| ||
|short_description=p@chr11:76863678..76863731,+ | |short_description=p@chr11:76863678..76863731,+ | ||
}} | }} |
Latest revision as of 02:42, 24 July 2015
Short description: | p@chr11:76863678..76863731, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:76863678..76863731, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 4.69e-14 | 5 |
hematopoietic cell | 1.66e-08 | 177 |
conventional dendritic cell | 3.18e-08 | 8 |
dendritic cell | 6.94e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
tonsil | 1.22e-17 | 1 |
mucosa-associated lymphoid tissue | 1.22e-17 | 1 |
lymphoid tissue | 1.22e-17 | 1 |
tonsillar ring | 1.22e-17 | 1 |
umbilical cord | 8.23e-16 | 10 |
blastocyst | 8.23e-16 | 10 |
blastula | 8.23e-16 | 10 |
bilaminar disc | 8.23e-16 | 10 |
inner cell mass | 8.23e-16 | 10 |
cleaving embryo | 8.23e-16 | 10 |
connecting stalk | 8.23e-16 | 10 |
inner cell mass derived epiblast | 8.23e-16 | 10 |
extraembryonic mesoderm | 8.23e-16 | 10 |
blood | 9.44e-11 | 15 |
haemolymphatic fluid | 9.44e-11 | 15 |
organism substance | 9.44e-11 | 15 |
chordate pharynx | 1.73e-07 | 10 |
pharyngeal region of foregut | 1.73e-07 | 10 |
extraembryonic structure | 6.35e-07 | 24 |
pharynx | 6.94e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.26e-18 | 1 |
cutaneous T cell lymphoma | 5.26e-18 | 1 |
mycosis fungoides | 5.26e-18 | 1 |
hematologic cancer | 3.67e-08 | 51 |
immune system cancer | 3.67e-08 | 51 |
lymphoma | 1.33e-07 | 10 |
leukemia | 4.36e-07 | 39 |