FFCP PHASE1:Hg19::chr11:8643189..8643192,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:8643189..8643192,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_at_chr11:8643189..8643192,- | |description=CAGE_peak_at_chr11:8643189..8643192,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002363;9.07e-18;2!CL:0002593;9.07e-18;2!CL:0002577;2.59e-12;3!CL:0002595;6.55e-08;5 | |ontology_enrichment_celltype_v019=CL:0002363;9.07e-18;2!CL:0002593;9.07e-18;2!CL:0002577;2.59e-12;3!CL:0002595;6.55e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.07e-17,2;CL:0002363,1.27e-17,2;CL:0000008,1.27e-17,2;CL:0002577,2.07e-12,3;CL:0002595,7.01e-08,5 | |||
|ontology_enrichment_development_v019=CL:0000008;9.07e-18;2!UBERON:0007297;9.07e-18;2 | |ontology_enrichment_development_v019=CL:0000008;9.07e-18;2!UBERON:0007297;9.07e-18;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;5.05e-34;1!UBERON:0007195;5.05e-34;1!UBERON:0003566;9.07e-18;2!UBERON:0001777;9.07e-18;2!UBERON:0002456;9.07e-18;2!UBERON:0003135;4.52e-13;11!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0001987;1.44e-09;4!UBERON:0005904;1.44e-09;4!UBERON:0003891;1.44e-09;4!UBERON:0000964;1.44e-09;4!UBERON:0010409;1.44e-09;4!UBERON:0003834;6.55e-08;5!UBERON:0001533;6.55e-08;5!UBERON:0003101;5.09e-07;22!UBERON:0000079;5.09e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0001301;5.05e-34;1!UBERON:0007195;5.05e-34;1!UBERON:0003566;9.07e-18;2!UBERON:0001777;9.07e-18;2!UBERON:0002456;9.07e-18;2!UBERON:0003135;4.52e-13;11!UBERON:0006947;2.59e-12;3!UBERON:0004054;2.59e-12;3!UBERON:0001987;1.44e-09;4!UBERON:0005904;1.44e-09;4!UBERON:0003891;1.44e-09;4!UBERON:0000964;1.44e-09;4!UBERON:0010409;1.44e-09;4!UBERON:0003834;6.55e-08;5!UBERON:0001533;6.55e-08;5!UBERON:0003101;5.09e-07;22!UBERON:0000079;5.09e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,3.61e-34,1;UBERON:0007195,5.05e-34,1;UBERON:0002456,1.07e-17,2;UBERON:0003566,1.27e-17,2;UBERON:0001777,1.27e-17,2;UBERON:0003135,4.25e-13,11;UBERON:0006947,2.31e-12,3;UBERON:0004054,2.31e-12,3;UBERON:0001987,1.22e-09,4;UBERON:0004340,1.22e-09,4;UBERON:0005904,1.32e-09,4;UBERON:0003891,1.70e-09,4;UBERON:0000964,1.70e-09,4;UBERON:0010409,1.70e-09,4;UBERON:0004348,1.70e-09,4;UBERON:0005427,1.70e-09,4;UBERON:0003834,7.01e-08,5;UBERON:0001533,7.01e-08,5;UBERON:0003101,4.94e-07,22;UBERON:0000079,4.94e-07,22;UBERON:0003133,5.76e-07,48 | |||
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| ||
|short_description=p@chr11:8643189..8643192,- | |short_description=p@chr11:8643189..8643192,- | ||
}} | }} |
Latest revision as of 03:18, 24 July 2015
Short description: | p@chr11:8643189..8643192, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:8643189..8643192, - |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.07e-17 | 2 |
keratocyte | 1.27e-17 | 2 |
migratory cranial neural crest cell | 1.27e-17 | 2 |
placental epithelial cell | 2.07e-12 | 3 |
smooth muscle cell of the subclavian artery | 7.01e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
epididymis | 3.61e-34 | 1 |
stroma of bone marrow | 5.05e-34 | 1 |
internal thoracic artery | 1.07e-17 | 2 |
head connective tissue | 1.27e-17 | 2 |
substantia propria of cornea | 1.27e-17 | 2 |
male reproductive organ | 4.25e-13 | 11 |
male genital duct | 2.31e-12 | 3 |
internal male genitalia | 2.31e-12 | 3 |
placenta | 1.22e-09 | 4 |
allantois | 1.22e-09 | 4 |
duct of male reproductive system | 1.32e-09 | 4 |
stroma | 1.70e-09 | 4 |
cornea | 1.70e-09 | 4 |
eye surface | 1.70e-09 | 4 |
optic eminence | 1.70e-09 | 4 |
corneal primordium | 1.70e-09 | 4 |
thoracic segment blood vessel | 7.01e-08 | 5 |
subclavian artery | 7.01e-08 | 5 |
male organism | 4.94e-07 | 22 |
male reproductive system | 4.94e-07 | 22 |
reproductive organ | 5.76e-07 | 48 |