FFCP PHASE1:Hg19::chr12:25039992..25039996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:25039992..25039996,- | |||
|description=CAGE_peak_at_chr12:25039992..25039996,- | |description=CAGE_peak_at_chr12:25039992..25039996,- | ||
|id=chr12:25039992..25039996,- | |id=chr12:25039992..25039996,- | ||
|ontology_enrichment_celltype=CL:0002057!2.43e-16!42;CL:0000860!2.58e-14!45;CL:0002009!1.57e-11!65;CL:0002194!2.45e-11!63;CL:0000576!2.45e-11!63;CL:0000040!2.45e-11!63;CL:0000559!2.45e-11!63;CL:0000839!4.83e-10!70;CL:0000557!5.87e-10!71;CL:0000763!5.91e-09!112;CL:0000049!5.91e-09!112;CL:0000766!2.76e-08!76;CL:0002031!5.73e-07!124;CL:0002032!8.23e-07!165;CL:0000837!8.23e-07!165 | |ontology_enrichment_celltype=CL:0002057!2.43e-16!42;CL:0000860!2.58e-14!45;CL:0002009!1.57e-11!65;CL:0002194!2.45e-11!63;CL:0000576!2.45e-11!63;CL:0000040!2.45e-11!63;CL:0000559!2.45e-11!63;CL:0000839!4.83e-10!70;CL:0000557!5.87e-10!71;CL:0000763!5.91e-09!112;CL:0000049!5.91e-09!112;CL:0000766!2.76e-08!76;CL:0002031!5.73e-07!124;CL:0002032!8.23e-07!165;CL:0000837!8.23e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.66e-35;33!CL:0002057;6.66e-35;33!CL:0000473;8.11e-23;39!CL:0000234;8.11e-23;39!CL:0000576;3.14e-17;48!CL:0000766;7.10e-12;69!CL:0000039;3.38e-09;7!CL:0000586;3.38e-09;7 | |ontology_enrichment_celltype_v019=CL:0000860;6.66e-35;33!CL:0002057;6.66e-35;33!CL:0000473;8.11e-23;39!CL:0000234;8.11e-23;39!CL:0000576;3.14e-17;48!CL:0000766;7.10e-12;69!CL:0000039;3.38e-09;7!CL:0000586;3.38e-09;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.45e-33,42;CL:0002057,3.45e-33,42;CL:0000473,1.13e-28,48;CL:0000234,1.13e-28,48;CL:0002009,1.23e-24,61;CL:0002194,2.40e-22,59;CL:0000576,2.40e-22,59;CL:0000040,2.40e-22,59;CL:0000559,2.40e-22,59;CL:0000557,3.50e-22,67;CL:0000839,1.06e-19,66;CL:0000766,7.73e-18,72;CL:0000763,1.85e-14,108;CL:0000049,1.85e-14,108;CL:0002031,1.02e-12,120;CL:0002087,1.00e-11,115;CL:0000738,7.75e-11,136;CL:0002032,6.82e-10,161;CL:0000837,6.82e-10,161;CL:0000037,2.46e-09,168;CL:0000039,3.07e-09,7;CL:0000586,3.07e-09,7;CL:0000988,1.10e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;8.65e-23;42 | |ontology_enrichment_development_v019=CL:0002057;8.65e-23;42 | ||
|ontology_enrichment_disease=DOID:3095!1.11e-08!22;DOID:2994!1.11e-08!22 | |ontology_enrichment_disease=DOID:3095!1.11e-08!22;DOID:2994!1.11e-08!22 | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.43e-08;1!DOID:0060061;2.43e-08;1!DOID:8691;2.43e-08;1 | |ontology_enrichment_disease_v019=DOID:0060060;2.43e-08;1!DOID:0060061;2.43e-08;1!DOID:8691;2.43e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.11e-08,1;DOID:0060061,3.11e-08,1;DOID:8691,3.11e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!2.04e-08!86;UBERON:0002371!8.85e-08!80;UBERON:0002390!2.55e-07!102;UBERON:0003061!2.55e-07!102;UBERON:0004765!2.74e-07!101;UBERON:0001434!2.74e-07!101;UBERON:0002193!7.32e-07!112 | |ontology_enrichment_uberon=UBERON:0001474!2.04e-08!86;UBERON:0002371!8.85e-08!80;UBERON:0002390!2.55e-07!102;UBERON:0003061!2.55e-07!102;UBERON:0004765!2.74e-07!101;UBERON:0001434!2.74e-07!101;UBERON:0002193!7.32e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.18e-08;8 | |ontology_enrichment_uberon_v019=UBERON:0000473;4.18e-08;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.23e-19,76;UBERON:0001474,1.34e-17,82;UBERON:0002390,3.21e-16,98;UBERON:0003061,3.21e-16,98;UBERON:0004765,9.03e-16,90;UBERON:0002405,3.63e-15,93;UBERON:0002193,2.02e-14,108;UBERON:0001434,6.79e-14,100;UBERON:0003081,3.95e-09,203;UBERON:0000473,3.85e-08,8;UBERON:0002204,4.18e-07,167;UBERON:0000926,9.24e-07,315;UBERON:0004120,9.24e-07,315;UBERON:0006603,9.24e-07,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0.464448369948228,0,0,0,0.542270404062111,0.426507697462265,0,0,1.00272223735071,0.434021741431704,0,0,0,0.726991193897824,1.88937971844405,0,0.929716147622738,4.52284676824008,2.47765096716083,0.863077176966451,1.5369642391746,0.236482229888585,0.689491361473237,7.10033151942209,0,2.25890807451126,1.91034305040492,0.674170453335254,1.22433556948361,1.60464513538047,0.639337125799041,0,0.398927315243264,0,0.580418477257168,1.13477044938228,1.24564449799115,2.51248665256743,2.60741459210101,0.868755378820466,0.605399502633369,1.47311054395026,0.316462387440884,0.422510572623884,0.212604299965044,0,0.336985893439485,0.150176892841506,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0.651844533267181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,1.04142150482278,0,0,0.275118041940067,0,0,0,0,1.20848795132744,0,0.24406205754817,0,0,0.625098097988558,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0.496971951695318,0,0.662045904066094,0.860509862246441,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0,0,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0,0.438977620880838,0.30648779579902,0,0.113432183160021,0.717558542755448,0,0,0,0,0,0.18611685633159,0.843881661206331,0,0.757301322732344,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0.117408694235822,0.144366447761074,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,1.04007436911366,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0,0,0.256686072559497,0,0,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0.473107245101804,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.64341568457443,0,0,0,0.164254312027618,0,0,0.241718899183244,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0.183138929636687,0.247528499761764,0,0,0,0.580024309752732,0.308097234229289,0.614014698904518,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.255225424989168,0.10115778085555,0,0.62962469366128,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0,0,0,0.284567373393656,0,0,0,1.48171507906718,0,0.561594356226918,0.456469358066384,0,0,0.169291777801603,0.1605880751037,0,0,0,0,0.447352215784832,0.166849141711909,0.19538809540204,0,0,0,0.99921590399346,0,0.18714054040822,0,0,0,0,0,0,0,0,0.140669416410513,0,0.494411622680279,0.211125408127993,0.19924798825107,0,0,0.306806047506464,0.123084805461069,0,0.269605053441981,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0.568967241427498,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0.922255617552241,0.0897576444097721,0.108647371922008,0,0,0,0,0.470940769185074,0,0,0.19606253431774,0.335643173951685,0.37950746544837,0.476809736941136,0,0,0.282706142867882,0,0.995261931078505,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0.134802265961354,0.802577647298789,0.234264445725339,0,0.19566461893209,0,0,0,0.30607276163049,0.189559738885464,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0,0.353024506766001,0,0.137041924646751,0,0.126621591911757,0,0,0,1.9980960958213,0,0,0.343189995723929,0,0.49701014226173,0.235694034616795,0,0,0.203996435272644,0,0.600420288709789,0,0,0.859530882839914,0.262887354279314,0,0.458320848023367,0.717873024576814,0.399358000997982,0,0,0,0.360299883542404,0,0.0787831823072236,0,0,0,0.254019996197353,0,0,0.803765742325096,0.137539436597234,0,1.349843349309,0,0.0607495566580247,0,0,0.0524545881349981,0.105600336519406,0,0.191915197319445,0,0.662091970365432,0,0,0,0.326587360109409,0,0.574647645245373,0,0,0,0,0.129282956361551,0.26446520348538,0.342173675768659,0,0,0,0.414239055347196,0,0.197611631897944,0.365377795142688,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0,0.124192805882767,2.49027542885215,0,0,0,0.941063278792687,0,0.144921028610825,0.149254802886874,0,0,0,0,0,0,0,0.15543720058278,0,0,0.449803112163605,0,0.414706207840855,0,0,0.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| ||
|short_description=p@chr12:25039992..25039996,- | |short_description=p@chr12:25039992..25039996,- | ||
}} | }} |
Latest revision as of 07:41, 24 July 2015
Short description: | p@chr12:25039992..25039996, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:25039992..25039996, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.45e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.45e-33 | 42 |
defensive cell | 1.13e-28 | 48 |
phagocyte | 1.13e-28 | 48 |
macrophage dendritic cell progenitor | 1.23e-24 | 61 |
monopoietic cell | 2.40e-22 | 59 |
monocyte | 2.40e-22 | 59 |
monoblast | 2.40e-22 | 59 |
promonocyte | 2.40e-22 | 59 |
granulocyte monocyte progenitor cell | 3.50e-22 | 67 |
myeloid lineage restricted progenitor cell | 1.06e-19 | 66 |
myeloid leukocyte | 7.73e-18 | 72 |
myeloid cell | 1.85e-14 | 108 |
common myeloid progenitor | 1.85e-14 | 108 |
hematopoietic lineage restricted progenitor cell | 1.02e-12 | 120 |
nongranular leukocyte | 1.00e-11 | 115 |
leukocyte | 7.75e-11 | 136 |
hematopoietic oligopotent progenitor cell | 6.82e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.82e-10 | 161 |
hematopoietic stem cell | 2.46e-09 | 168 |
germ line cell | 3.07e-09 | 7 |
germ cell | 3.07e-09 | 7 |
hematopoietic cell | 1.10e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.23e-19 | 76 |
bone element | 1.34e-17 | 82 |
hematopoietic system | 3.21e-16 | 98 |
blood island | 3.21e-16 | 98 |
skeletal element | 9.03e-16 | 90 |
immune system | 3.63e-15 | 93 |
hemolymphoid system | 2.02e-14 | 108 |
skeletal system | 6.79e-14 | 100 |
lateral plate mesoderm | 3.95e-09 | 203 |
testis | 3.85e-08 | 8 |
musculoskeletal system | 4.18e-07 | 167 |
mesoderm | 9.24e-07 | 315 |
mesoderm-derived structure | 9.24e-07 | 315 |
presumptive mesoderm | 9.24e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.11e-08 | 1 |
cutaneous T cell lymphoma | 3.11e-08 | 1 |
mycosis fungoides | 3.11e-08 | 1 |