FFCP PHASE1:Hg19::chr12:52909007..52909012,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:52909007..52909012,-
|short_description=p@chr12:52909007..52909012,-
|description=CAGE_peak_at_chr12:52909007..52909012,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:52909007..52909012,- | |||
|coexpression_cluster_id=C1673 | |||
|description=CAGE_peak_at_chr12:52909007..52909012,- | |||
|id=chr12:52909007..52909012,- | |||
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|ontology_enrichment_disease=DOID:1749!5.00e-10!14 | |||
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| ||
|short_description=p@chr12:52909007..52909012,- | |||
}} | }} |
Latest revision as of 09:36, 24 July 2015
Short description: | p@chr12:52909007..52909012, - |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:52909007..52909012, - |
Coexpression cluster: | C1673_salivary_Corneal_Keratinocyte_Sebocyte_Small_Bronchial_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin gland | 7.16e-19 | 2 |
epidermis gland | 7.16e-19 | 2 |
gland of integumental system | 7.16e-19 | 2 |
sebaceous gland | 7.16e-19 | 2 |
skin sebaceous gland | 7.16e-19 | 2 |
sweat gland | 7.16e-19 | 2 |
sweat gland placode | 7.16e-19 | 2 |
sebaceous gland placode | 7.16e-19 | 2 |
skin epidermis | 6.18e-15 | 15 |
outer epithelium | 6.18e-15 | 15 |
enveloping layer of ectoderm | 6.18e-15 | 15 |
gingival epithelium | 6.56e-13 | 3 |
surface structure | 3.28e-11 | 99 |
respiratory system | 8.72e-11 | 74 |
oral opening | 2.94e-10 | 22 |
urothelium | 2.36e-08 | 5 |
mouth | 9.63e-08 | 29 |
stomodeum | 9.63e-08 | 29 |
skin of body | 1.90e-07 | 41 |
endoderm-derived structure | 1.97e-07 | 160 |
endoderm | 1.97e-07 | 160 |
presumptive endoderm | 1.97e-07 | 160 |
saliva-secreting gland | 3.77e-07 | 6 |
gland of oral region | 3.77e-07 | 6 |
gland of foregut | 3.77e-07 | 6 |
oral gland | 3.77e-07 | 6 |
oral cavity | 3.77e-07 | 6 |
transitional epithelium | 4.26e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 4.75e-10 | 1 |
keratoacanthoma | 4.75e-10 | 1 |