FFCP PHASE1:Hg19::chr12:54797500..54797522,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:54797500..54797522,-
|short_description=p@chr12:54797500..54797522,-
|description=CAGE_peak_at_chr12:54797500..54797522,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:54797500..54797522,- | |||
|description=CAGE_peak_at_chr12:54797500..54797522,- | |||
|id=chr12:54797500..54797522,- | |||
|ontology_enrichment_celltype=CL:0002371!3.49e-21!591;CL:0000144!2.09e-20!625;CL:0000222!3.09e-18!119;CL:0000048!3.81e-18!430;CL:0000723!9.37e-18!436;CL:0000034!2.91e-17!444;CL:0000055!7.27e-16!180;CL:0000680!1.26e-14!57;CL:0000056!1.26e-14!57;CL:0000355!1.26e-14!57;CL:0000183!2.07e-14!59;CL:0000187!1.88e-13!54;CL:0000548!2.81e-13!679;CL:0000004!2.81e-13!679;CL:0000255!2.81e-13!679;CL:0000012!2.94e-13!682;CL:0000393!7.65e-12!60;CL:0000211!7.65e-12!60;CL:0000192!1.26e-11!42;CL:0000514!1.26e-11!42;CL:0000359!2.22e-10!32;CL:0000003!1.97e-09!722;CL:0000115!3.71e-09!35;CL:0002057!4.73e-09!42;CL:0000057!7.61e-09!75;CL:0002139!3.06e-08!24;CL:0000860!3.11e-08!45;CL:0002320!7.81e-08!365;CL:0000213!2.62e-07!57;CL:0000215!2.62e-07!57;CL:0000220!4.83e-07!246;CL:0002194!7.06e-07!63;CL:0000576!7.06e-07!63;CL:0000040!7.06e-07!63;CL:0000559!7.06e-07!63;CL:0002078!7.51e-07!44;CL:0000071!9.32e-07!18;CL:0002546!9.32e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.58e-12;33!CL:0002057;6.58e-12;33!CL:0000192;5.84e-09;43!CL:0000115;8.97e-09;36!CL:0000359;1.26e-08;32!CL:0000473;1.52e-08;39!CL:0000234;1.52e-08;39!CL:0000134;1.80e-08;55!CL:0000187;3.28e-08;55!CL:0000071;1.48e-07;18!CL:1000413;2.45e-07;9!CL:0002139;5.50e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.87e-15,427;CL:0000222,9.02e-15,121;CL:0000723,1.27e-14,433;CL:0000034,2.59e-14,441;CL:0000680,9.00e-14,58;CL:0000056,9.00e-14,58;CL:0000355,9.00e-14,58;CL:0000187,1.76e-12,55;CL:0000192,1.26e-10,43;CL:0000514,1.26e-10,43;CL:0000393,1.93e-10,61;CL:0000211,1.93e-10,61;CL:0000860,2.45e-09,42;CL:0002057,2.45e-09,42;CL:0000115,2.46e-09,36;CL:0000359,1.44e-08,32;CL:0000473,2.15e-08,48;CL:0000234,2.15e-08,48;CL:0000071,1.88e-07,18;CL:0002546,1.88e-07,18;CL:1000413,5.06e-07,9;CL:0002139,7.21e-07,24;CL:0002320,8.41e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000514;5.84e-09;43!CL:0000355;6.81e-08;58!CL:0002546;1.48e-07;18!CL:0002057;2.01e-07;42 | |||
|ontology_enrichment_disease=DOID:2394!3.70e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.45e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.62e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0004535!3.94e-20!110;UBERON:0000055!4.74e-20!69;UBERON:0001009!7.34e-20!113;UBERON:0002049!1.57e-19!79;UBERON:0007798!1.57e-19!79;UBERON:0003081!3.10e-19!216;UBERON:0001981!3.60e-18!60;UBERON:0007500!3.60e-18!60;UBERON:0004537!3.60e-18!60;UBERON:0006965!3.60e-18!60;UBERON:0004872!1.76e-17!84;UBERON:0000926!3.66e-16!448;UBERON:0004120!3.66e-16!448;UBERON:0006603!3.66e-16!448;UBERON:0001637!1.94e-15!42;UBERON:0003509!1.94e-15!42;UBERON:0004572!1.94e-15!42;UBERON:0002204!2.06e-15!167;UBERON:0004290!3.83e-15!70;UBERON:0000914!1.92e-14!83;UBERON:0002329!1.92e-14!83;UBERON:0003077!1.92e-14!83;UBERON:0003059!1.92e-14!83;UBERON:0007282!1.92e-14!83;UBERON:0009618!1.92e-14!83;UBERON:0007285!1.92e-14!83;UBERON:0001134!3.51e-13!61;UBERON:0002036!3.51e-13!61;UBERON:0003082!3.51e-13!61;UBERON:0002385!6.15e-13!63;UBERON:0001015!6.15e-13!63;UBERON:0000383!6.15e-13!63;UBERON:0004573!1.08e-12!33;UBERON:0004571!1.08e-12!33;UBERON:0000486!4.66e-12!82;UBERON:0003914!1.66e-11!118;UBERON:0005256!4.05e-10!143;UBERON:0000490!4.59e-10!138;UBERON:0000468!5.90e-08!659;UBERON:0002384!9.69e-08!375;UBERON:0000947!1.28e-07!21;UBERON:0010191!1.28e-07!21;UBERON:0001986!9.32e-07!18;UBERON:0004638!9.32e-07!18;UBERON:0004852!9.32e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.89e-13;42!UBERON:0003509;4.89e-13;42!UBERON:0004572;4.89e-13;42!UBERON:0004573;7.79e-11;33!UBERON:0004571;7.79e-11;33!UBERON:0007500;7.28e-09;56!UBERON:0001981;7.28e-09;56!UBERON:0004537;7.28e-09;56!UBERON:0000947;5.45e-08;21!UBERON:0010191;5.45e-08;21!UBERON:0002385;5.86e-08;31!UBERON:0001015;5.86e-08;31!UBERON:0000383;5.86e-08;31!UBERON:0003914;6.75e-08;74!UBERON:0003513;1.21e-07;7!UBERON:0004638;1.48e-07;18!UBERON:0001986;1.48e-07;18!UBERON:0004852;1.48e-07;18!UBERON:0000055;2.09e-07;65!UBERON:0003915;2.45e-07;9!UBERON:0004700;2.45e-07;9!UBERON:0001917;2.45e-07;9!UBERON:0002049;9.92e-07;75!UBERON:0007798;9.92e-07;75 | |||
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|phase1_expression=0.54503513781167,1.2846031433459,0.422863212287913,2.00146596706261,0.446961094427288,0.872338524100369,10.1319951267324,0,0,0.245733936501509,0.697801167972428,0.218441372130172,0.527533956456907,0.618831764800233,1.32558950291166,1.34465029290355,5.42425075221579,0.730310090387373,2.92759679274304,0.61560529038394,0.612002073732759,0.626909442956176,0,0.273748850145768,0.251085279189606,0,0,0.0787107813136792,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,1.30858414901608,1.88937971844405,1.4555043671269,1.39457422143411,0.411167888021826,0.619412741790207,0.863077176966451,1.5369642391746,0.945928919554341,1.37898272294647,0.645484683583826,1.35426486594342,3.57660445130949,2.45615535052061,0.898893937780338,1.83650335422542,1.28371610830437,1.91801137739712,1.9791078011203,1.39624560335142,0.426224750532694,2.61188314765726,2.26954089876456,2.4912889959823,3.01498398308092,1.0429658368404,1.08594422352558,1.81619850790011,2.94622108790052,0.949387162322653,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.552700035571697,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0,0,1.34140171940727,0.895037932904712,0.361439152384566,1.00267582127178,1.01392563272577,0,0.973269740605272,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0.324547393654683,0.174129737299267,0.797747763113191,0,0,0,1.39133685156694,0.860234595106124,1.04142150482278,0,4.61449379830897,9.35401342596229,3.13492449805216,0.516833518338658,0.35576626268671,0.66944122552934,0,0.760272105718513,1.46437234528902,1.10298924103761,16.2028389576352,0.625098097988558,0.44905874525234,0.450445921933289,3.06633274931766,1.89853131913626,4.03043836646896,1.31780417436063,0,0,1.49091585508596,0.759783069987479,0.662045904066094,2.86836620748814,1.77334191099179,0.560677600142307,2.1349799145941,3.20667812942308,0,1.48181739276657,1.79808093424805,0.151357427644931,0,0.468642863667593,0.936480230490962,0,0.896692083310806,0.704606991862589,0.647491777472526,0.280901613404497,0.408308342509787,0.982674538494144,0.929932030581889,0,0,0.910161361938026,6.46756327634615,0.336672227908132,0.250237039743928,0.277064115484183,0,0.612975591598039,0,1.70148274740032,1.07633781413317,0.427114777637135,0.635795703478686,1.80054657650641,0.515262646192195,0,0.18611685633159,0.843881661206331,0.876933046450788,0.504867548488229,0.552299391853796,0.161646056818812,1.77504796258307,1.5112814734146,0.339121184620975,0,0.545492241181669,0,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,1.92972281457866,2.76269842704961,0.928735856063958,0,0.473227200159376,0.505754070234305,0,0.220587945464788,0.217879444092406,0,0.269662616320329,0,0.769494313892781,2.95262181849859,2.80483547606892,0.8231480226628,1.47008711385542,0,0.982827216677626,0,0,0,0.343135620597051,0.439001141634502,0,0.201057944823262,0.277765335475589,0.325808305310325,1.03993478527958,1.44331342025273,0.115930404975077,0.117408694235822,1.15493158208859,0.925971025153221,1.52203321787679,0,0,0.492434012174795,0,0.297262324577456,0,0.503946384596579,0.567100388969546,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0.300343057843917,0,0.672786506072164,0.87192013766656,0.2933531432838,0.387815147273333,7.15312891703765,3.381211010224,0.531876233169741,0,0,2.83698264046557,1.3321108950805,0.285955987316295,0.542621605391443,0,0.977208552881205,0,1.58390374586686,0.904318131178758,0,1.19967589418468,0,0,2.10833939483032,1.91699884393266,2.29723871668228,0,2.46128221334885,3.08214483825575,0.358121926479791,0,0,0,0.128343036279748,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0.613457458595699,1.00034104211935,1.35632511849868,1.24782516918484,2.14114786556594,0.315404830067869,0.117141414992713,0.300946099727719,0,1.03473071292505,1.32845119707087,0.921845842708516,0.695068915744663,0.587403472388222,1.02943027143257,0,0.431428401637234,0,0.303127571446259,0,0.604780586659361,0,0.61384789315225,1.68396056659844,0.512556597022804,0,0.321707842287215,0,2.31314540703983,1.9531789784444,0.410635780069046,1.55776328755086,1.39452454151951,0,1.20303882181971,0.0920809889358963,0.918515585316854,1.82091168006717,1.70461739447251,0,0.462092022626489,0,0,0.422206515571503,4.54933536283586,2.72149928442425,0.431831832204279,6.16909010761157,0,2.00675909541941,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0.290012154876366,1.23238893691716,1.5350367472613,2.34322173223702,0.537101224341368,1.59518363305651,1.87498580315422,0.267096106940212,0.495854746082934,0.192190067365106,0,0.30347334256665,0.464845549297286,4.40737285562896,0.6970372701606,1.54016790088044,1.06461206063404,0,0.9266210955196,0.572499546967965,0.372158369359667,1.2655176988749,1.14378116354295,1.27948895655667,0,1.27281299170375,3.13979456079692,1.079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| ||
|short_description=p@chr12:54797500..54797522,- | |||
}} | }} |
Latest revision as of 10:03, 24 July 2015
Short description: | p@chr12:54797500..54797522, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:54797500..54797522, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.87e-15 | 427 |
mesodermal cell | 9.02e-15 | 121 |
somatic stem cell | 1.27e-14 | 433 |
stem cell | 2.59e-14 | 441 |
muscle precursor cell | 9.00e-14 | 58 |
myoblast | 9.00e-14 | 58 |
multi-potent skeletal muscle stem cell | 9.00e-14 | 58 |
muscle cell | 1.76e-12 | 55 |
smooth muscle cell | 1.26e-10 | 43 |
smooth muscle myoblast | 1.26e-10 | 43 |
electrically responsive cell | 1.93e-10 | 61 |
electrically active cell | 1.93e-10 | 61 |
classical monocyte | 2.45e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.45e-09 | 42 |
endothelial cell | 2.46e-09 | 36 |
vascular associated smooth muscle cell | 1.44e-08 | 32 |
defensive cell | 2.15e-08 | 48 |
phagocyte | 2.15e-08 | 48 |
blood vessel endothelial cell | 1.88e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.88e-07 | 18 |
endothelial cell of artery | 5.06e-07 | 9 |
endothelial cell of vascular tree | 7.21e-07 | 24 |
connective tissue cell | 8.41e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.62e-09 | 14 |